EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000043500 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3738 bases
Position: chrAPWO02000117.1:1373779-1377516
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028001	RVT_1	PF00078.27	4.7e-49	1	1
ENSAMXP00000028001	RNase_H	PF00075.24	1.4e-12	1	1
ENSAMXP00000028001	Exo_endo_phos	PF03372.23	6.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045927	-	3738	-	ENSAMXP00000028001	1245 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000043500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043500	-	99	48.169	ENSDARG00000103037	CR848788.1	99	48.169	Danio_rerio
ENSAMXG00000043500	-	99	48.328	ENSDARG00000099201	BX908731.1	99	48.328	Danio_rerio
ENSAMXG00000043500	-	100	49.602	ENSDARG00000103436	BX548028.1	99	49.602	Danio_rerio
ENSAMXG00000043500	-	99	45.280	ENSKMAG00000003982	-	100	45.280	Kryptolebias_marmoratus
ENSAMXG00000043500	-	68	44.444	ENSKMAG00000012711	-	99	44.444	Kryptolebias_marmoratus
ENSAMXG00000043500	-	64	47.037	ENSKMAG00000021014	-	100	47.037	Kryptolebias_marmoratus
ENSAMXG00000043500	-	99	45.280	ENSKMAG00000004415	-	100	45.280	Kryptolebias_marmoratus
ENSAMXG00000043500	-	99	44.444	ENSORLG00000027174	-	99	44.444	Oryzias_latipes
ENSAMXG00000043500	-	99	44.365	ENSORLG00000023592	-	99	44.365	Oryzias_latipes
ENSAMXG00000043500	-	99	44.125	ENSORLG00000024423	-	99	44.125	Oryzias_latipes
ENSAMXG00000043500	-	99	44.365	ENSORLG00000026314	-	99	44.365	Oryzias_latipes
ENSAMXG00000043500	-	99	44.524	ENSORLG00020011427	-	99	44.524	Oryzias_latipes_hni
ENSAMXG00000043500	-	71	44.804	ENSORLG00020019901	-	100	44.804	Oryzias_latipes_hni
ENSAMXG00000043500	-	99	44.604	ENSORLG00020018543	-	99	44.604	Oryzias_latipes_hni
ENSAMXG00000043500	-	99	44.524	ENSORLG00020020238	-	99	44.524	Oryzias_latipes_hni
ENSAMXG00000043500	-	88	46.027	ENSORLG00015013792	-	99	46.027	Oryzias_latipes_hsok
ENSAMXG00000043500	-	86	47.339	ENSOMEG00000003836	-	98	47.339	Oryzias_melastigma
ENSAMXG00000043500	-	99	46.477	ENSPKIG00000019189	-	99	46.477	Paramormyrops_kingsleyae
ENSAMXG00000043500	-	82	40.390	ENSXMAG00000029923	-	99	40.665	Xiphophorus_maculatus
ENSAMXG00000043500	-	69	45.285	ENSXMAG00000020874	-	94	45.285	Xiphophorus_maculatus
ENSAMXG00000043500	-	99	45.280	ENSXMAG00000021061	-	100	45.280	Xiphophorus_maculatus
ENSAMXG00000043500	-	82	40.762	ENSXMAG00000027130	-	99	40.762	Xiphophorus_maculatus
ENSAMXG00000043500	-	61	44.005	ENSXMAG00000025430	-	99	44.005	Xiphophorus_maculatus
ENSAMXG00000043500	-	89	45.948	ENSXMAG00000026248	-	99	45.948	Xiphophorus_maculatus
ENSAMXG00000043500	-	96	47.039	ENSXMAG00000021755	-	100	46.178	Xiphophorus_maculatus
ENSAMXG00000043500	-	89	45.948	ENSXMAG00000022223	-	99	45.948	Xiphophorus_maculatus
ENSAMXG00000043500	-	63	46.887	ENSXMAG00000023377	-	100	46.887	Xiphophorus_maculatus
ENSAMXG00000043500	-	96	47.039	ENSXMAG00000021070	-	100	46.178	Xiphophorus_maculatus
ENSAMXG00000043500	-	96	46.789	ENSXMAG00000028309	-	100	45.939	Xiphophorus_maculatus
ENSAMXG00000043500	-	71	49.383	ENSXMAG00000024143	-	100	49.383	Xiphophorus_maculatus
ENSAMXG00000043500	-	92	47.405	ENSXMAG00000029466	-	99	47.405	Xiphophorus_maculatus
ENSAMXG00000043500	-	82	40.448	ENSXMAG00000023078	-	99	40.723	Xiphophorus_maculatus
ENSAMXG00000043500	-	65	47.388	ENSXMAG00000023126	-	100	47.388	Xiphophorus_maculatus
ENSAMXG00000043500	-	89	45.948	ENSXMAG00000026588	-	99	45.948	Xiphophorus_maculatus