EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000043717 (Gene tree)
Gene ID
103045387
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
14618 bases
Position
chr2:5437183-5451800
Accession
103045387
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000054382MMR_HSR1PF01926.230.0001611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000050884-3979XM_007256268ENSAMXP00000054382221 (aa)XP_007256330W5JYP3
Gene Model
Click here to download ENSAMXG00000043717's gene model file
Pathways
Pathway IDPathway NameSource
amex04144EndocytosisKEGG
amex04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043717's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000043717rab5c7036.774ENSAMXG00000040611rabl26836.774
ENSAMXG00000043717rab5c7346.914ENSAMXG00000024632rab11al7946.914
ENSAMXG00000043717rab5c7643.023ENSAMXG00000032027rab7a9639.000
ENSAMXG00000043717rab5c5331.148ENSAMXG00000039062arl8a6231.148
ENSAMXG00000043717rab5c8941.117ENSAMXG00000032547rab6a8244.444
ENSAMXG00000043717rab5c8843.077ENSAMXG00000034850-9642.564
ENSAMXG00000043717rab5c9042.289ENSAMXG00000042073rab18b8045.455
ENSAMXG00000043717rab5c8831.188ENSAMXG00000032663si:dkey-13a21.49331.188
ENSAMXG00000043717rab5c7240.252ENSAMXG00000043951rab157540.252
ENSAMXG00000043717rab5c5835.659ENSAMXG00000003504rab205035.659
ENSAMXG00000043717rab5c9890.367ENSAMXG00000037267-10090.367
ENSAMXG00000043717rab5c7136.250ENSAMXG00000017266rab366136.250
ENSAMXG00000043717rab5c5432.258ENSAMXG00000032775arl8bb6332.258
ENSAMXG00000043717rab5c7635.838ENSAMXG00000026059RAB9A8536.047
ENSAMXG00000043717rab5c8841.627ENSAMXG00000042655rab11bb7547.853
ENSAMXG00000043717rab5c8537.566ENSAMXG00000039737RAB197440.741
ENSAMXG00000043717rab5c8832.524ENSAMXG00000032729rab42a7735.976
ENSAMXG00000043717rab5c8941.089ENSAMXG00000009935rab307741.089
ENSAMXG00000043717rab5c8635.500ENSAMXG00000037428-8036.905
ENSAMXG00000043717rab5c9241.379ENSAMXG00000040126-7441.379
ENSAMXG00000043717rab5c7831.034ENSAMXG00000033907hrasb8731.737
ENSAMXG00000043717rab5c9983.945ENSAMXG00000036179rab5aa9983.871
ENSAMXG00000043717rab5c8845.128ENSAMXG00000032564rab1ab9645.128
ENSAMXG00000043717rab5c7444.785ENSAMXG00000039486zgc:1719277844.785
ENSAMXG00000043717rab5c7832.967ENSAMXG00000017217kras9032.164
ENSAMXG00000043717rab5c7641.071ENSAMXG00000038243si:dkey-16l2.169636.816
ENSAMXG00000043717rab5c7433.333ENSAMXG00000012327nras9133.333
ENSAMXG00000043717rab5c8839.487ENSAMXG00000030712rab138042.236
ENSAMXG00000043717rab5c7942.458ENSAMXG00000002254-9938.647
ENSAMXG00000043717rab5c9885.714ENSAMXG00000035919rab5ab9985.253
ENSAMXG00000043717rab5c6936.129ENSAMXG00000033390rap1aa7936.129
ENSAMXG00000043717rab5c7337.195ENSAMXG00000003717rab39bb7737.195
ENSAMXG00000043717rab5c7640.116ENSAMXG00000004882rab127040.116
ENSAMXG00000043717rab5c7543.373ENSAMXG00000033216rab418543.373
ENSAMXG00000043717rab5c8950.000ENSAMXG00000013054rab22a8354.601
ENSAMXG00000043717rab5c7746.552ENSAMXG00000040879rab25a7947.337
ENSAMXG00000043717rab5c7337.195ENSAMXG00000041657rab39ba7737.195
ENSAMXG00000043717rab5c8642.424ENSAMXG00000003155rab11a7548.447
ENSAMXG00000043717rab5c8843.077ENSAMXG00000003547rab1ba7347.239
ENSAMXG00000043717rab5c7840.449ENSAMXG00000040460zgc:1015597041.520
ENSAMXG00000043717rab5c7635.429ENSAMXG00000026476rab9b7635.429
ENSAMXG00000043717rab5c5432.258ENSAMXG00000030683arl8ba6232.787
ENSAMXG00000043717rab5c7132.500ENSAMXG00000043003rab34a6232.500
ENSAMXG00000043717rab5c6630.201ENSAMXG00000006018rab34b6330.625
ENSAMXG00000043717rab5c7536.612ENSAMXG00000040286rab33ba7536.612
ENSAMXG00000043717rab5c6533.103ENSAMXG00000029130-7833.793
ENSAMXG00000043717rab5c9041.919ENSAMXG00000009640rab149241.919
ENSAMXG00000043717rab5c8836.410ENSAMXG00000040604-9636.410
ENSAMXG00000043717rab5c8842.105ENSAMXG00000037623-7548.466
ENSAMXG00000043717rab5c9235.266ENSAMXG00000042419rab3c8136.571
ENSAMXG00000043717rab5c6635.135ENSAMXG00000033069si:cabz01085950.17135.135
ENSAMXG00000043717rab5c5234.711ENSAMXG00000034227rab32b7530.380
ENSAMXG00000043717rab5c8836.923ENSAMXG00000039865rab35b9636.923
ENSAMXG00000043717rab5c8833.000ENSAMXG00000025889RAB9A9733.000
ENSAMXG00000043717rab5c7238.365ENSAMXG00000033470RAB157538.365
ENSAMXG00000043717rab5c8141.573ENSAMXG00000036772rab2a7644.099
ENSAMXG00000043717rab5c8543.085ENSAMXG00000004630rab6ba9244.253
ENSAMXG00000043717rab5c7234.161ENSAMXG00000014960rab237934.969
ENSAMXG00000043717rab5c8843.627ENSAMXG00000029712rab25b8048.521
ENSAMXG00000043717rab5c7531.579ENSAMXG00000036330RAB387931.579
ENSAMXG00000043717rab5c7943.017ENSAMXG00000031957zgc:1009188743.017
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000043717rab5c9990.826ENSG00000108774RAB5C10096.000Homo_sapiens
ENSAMXG00000043717rab5c10096.380ENSAPOG00000016864rab5c10096.380Acanthochromis_polyacanthus
ENSAMXG00000043717rab5c9990.826ENSAMEG00000006003RAB5C9989.862Ailuropoda_melanoleuca
ENSAMXG00000043717rab5c10097.285ENSACIG00000010896rab5c10097.285Amphilophus_citrinellus
ENSAMXG00000043717rab5c10096.380ENSAOCG00000016614rab5c10096.380Amphiprion_ocellaris
ENSAMXG00000043717rab5c9896.296ENSAPEG00000017868-9996.296Amphiprion_percula
ENSAMXG00000043717rab5c9997.706ENSATEG00000001937rab5c9997.706Anabas_testudineus
ENSAMXG00000043717rab5c9393.204ENSANAG00000025390RAB5C10091.262Aotus_nancymaae
ENSAMXG00000043717rab5c10095.928ENSACLG00000002706rab5c10095.928Astatotilapia_calliptera
ENSAMXG00000043717rab5c9690.141ENSACLG00000008615-10088.789Astatotilapia_calliptera
ENSAMXG00000043717rab5c9891.244ENSBTAG00000006982RAB5C9989.401Bos_taurus
ENSAMXG00000043717rab5c9874.886WBGene00004268rab-59974.771Caenorhabditis_elegans
ENSAMXG00000043717rab5c9990.826ENSCAFG00000015629RAB5C9989.862Canis_familiaris
ENSAMXG00000043717rab5c9990.826ENSCAFG00020013537RAB5C9989.862Canis_lupus_dingo
ENSAMXG00000043717rab5c9891.244ENSCHIG00000012960RAB5C9989.401Capra_hircus
ENSAMXG00000043717rab5c9891.705ENSTSYG00000030531RAB5C9989.862Carlito_syrichta
ENSAMXG00000043717rab5c9891.244ENSCCAG00000025940RAB5C9989.401Cebus_capucinus
ENSAMXG00000043717rab5c9891.244ENSCATG00000040873RAB5C9989.862Cercocebus_atys
ENSAMXG00000043717rab5c9891.244ENSCLAG00000016650RAB5C9989.401Chinchilla_lanigera
ENSAMXG00000043717rab5c8195.531ENSCHOG00000009886RAB5C10095.531Choloepus_hoffmanni
ENSAMXG00000043717rab5c10075.113ENSCING00000003340-10074.661Ciona_intestinalis
ENSAMXG00000043717rab5c9975.221ENSCSAVG00000000613-9984.049Ciona_savignyi
ENSAMXG00000043717rab5c9891.244ENSCGRG00001014226Rab5c9989.401Cricetulus_griseus_chok1gshd
ENSAMXG00000043717rab5c9891.244ENSCGRG00000007534Rab5c9989.401Cricetulus_griseus_crigri
ENSAMXG00000043717rab5c10095.023ENSCSEG00000017024rab5c10095.023Cynoglossus_semilaevis
ENSAMXG00000043717rab5c10096.833ENSCVAG00000009550rab5c10096.833Cyprinodon_variegatus
ENSAMXG00000043717rab5c9891.244ENSDNOG00000038853RAB5C9988.940Dasypus_novemcinctus
ENSAMXG00000043717rab5c9892.166ENSDORG00000006819Rab5c9990.323Dipodomys_ordii
ENSAMXG00000043717rab5c9076.382FBgn0014010Rab58480.108Drosophila_melanogaster
ENSAMXG00000043717rab5c9877.880ENSEBUG00000014794rab5c8886.631Eptatretus_burgeri
ENSAMXG00000043717rab5c9990.826ENSEASG00005009281RAB5C9989.862Equus_asinus_asinus
ENSAMXG00000043717rab5c9891.705ENSECAG00000025054RAB5C9989.862Equus_caballus
ENSAMXG00000043717rab5c9891.244ENSEEUG00000002790RAB5C9989.401Erinaceus_europaeus
ENSAMXG00000043717rab5c9895.392ENSELUG00000018516rab5c9995.392Esox_lucius
ENSAMXG00000043717rab5c10091.403ENSELUG00000010439-10091.403Esox_lucius
ENSAMXG00000043717rab5c9891.244ENSFCAG00000002148RAB5C9989.401Felis_catus
ENSAMXG00000043717rab5c9890.783ENSFDAG00000021541RAB5C9988.940Fukomys_damarensis
ENSAMXG00000043717rab5c10097.738ENSFHEG00000012117rab5c10097.738Fundulus_heteroclitus
ENSAMXG00000043717rab5c9991.364ENSFHEG00000015268-9991.364Fundulus_heteroclitus
ENSAMXG00000043717rab5c10095.475ENSGMOG00000015096rab5c10095.475Gadus_morhua
ENSAMXG00000043717rab5c7689.286ENSGMOG00000001876-9789.286Gadus_morhua
ENSAMXG00000043717rab5c9591.905ENSGAFG00000003642-9989.686Gambusia_affinis
ENSAMXG00000043717rab5c10097.738ENSGAFG00000000884rab5c10097.738Gambusia_affinis
ENSAMXG00000043717rab5c10093.213ENSGACG00000008659rab5c10093.213Gasterosteus_aculeatus
ENSAMXG00000043717rab5c9891.244ENSGGOG00000005472RAB5C9989.862Gorilla_gorilla
ENSAMXG00000043717rab5c9690.141ENSHBUG00000006823-10088.789Haplochromis_burtoni
ENSAMXG00000043717rab5c10095.928ENSHBUG00000002014rab5c10095.928Haplochromis_burtoni
ENSAMXG00000043717rab5c9890.783ENSHGLG00000012067RAB5C9988.479Heterocephalus_glaber_female
ENSAMXG00000043717rab5c9582.857ENSHCOG00000020238-10080.702Hippocampus_comes
ENSAMXG00000043717rab5c9998.174ENSHCOG00000004662rab5c9898.174Hippocampus_comes
ENSAMXG00000043717rab5c10095.946ENSIPUG00000020082rab5c10095.946Ictalurus_punctatus
ENSAMXG00000043717rab5c9890.783ENSSTOG00000006620RAB5C9989.401Ictidomys_tridecemlineatus
ENSAMXG00000043717rab5c9891.705ENSJJAG00000021181Rab5c9989.401Jaculus_jaculus
ENSAMXG00000043717rab5c10097.285ENSKMAG00000020038rab5c10097.285Kryptolebias_marmoratus
ENSAMXG00000043717rab5c9991.364ENSKMAG00000017417-9991.364Kryptolebias_marmoratus
ENSAMXG00000043717rab5c10098.190ENSLBEG00000004128rab5c10098.190Labrus_bergylta
ENSAMXG00000043717rab5c10091.441ENSLBEG00000010408-10091.441Labrus_bergylta
ENSAMXG00000043717rab5c9892.627ENSLOCG00000012566rab5c10091.244Lepisosteus_oculatus
ENSAMXG00000043717rab5c9891.244ENSMFAG00000039627RAB5C9989.862Macaca_fascicularis
ENSAMXG00000043717rab5c9891.244ENSMNEG00000000355RAB5C9989.862Macaca_nemestrina
ENSAMXG00000043717rab5c10097.285ENSMAMG00000022322rab5c10097.285Mastacembelus_armatus
ENSAMXG00000043717rab5c9993.182ENSMAMG00000016207-9993.182Mastacembelus_armatus
ENSAMXG00000043717rab5c10095.928ENSMZEG00005022735rab5c10095.928Maylandia_zebra
ENSAMXG00000043717rab5c9690.141ENSMZEG00005021090-10088.789Maylandia_zebra
ENSAMXG00000043717rab5c9891.705ENSMAUG00000015005Rab5c9989.862Mesocricetus_auratus
ENSAMXG00000043717rab5c9891.705ENSMICG00000041608RAB5C9989.862Microcebus_murinus
ENSAMXG00000043717rab5c9891.705ENSMOCG00000018531-9989.401Microtus_ochrogaster
ENSAMXG00000043717rab5c10095.928ENSMMOG00000020621rab5c10095.928Mola_mola
ENSAMXG00000043717rab5c9890.278ENSMALG00000006052rab5c9790.455Monopterus_albus
ENSAMXG00000043717rab5c9990.455ENSMALG00000022348-9990.455Monopterus_albus
ENSAMXG00000043717rab5c9891.705MGP_CAROLIEiJ_G0017184Rab5c9989.862Mus_caroli
ENSAMXG00000043717rab5c9891.705ENSMUSG00000019173Rab5c9989.862Mus_musculus
ENSAMXG00000043717rab5c9891.705MGP_PahariEiJ_G0018314Rab5c9989.862Mus_pahari
ENSAMXG00000043717rab5c9891.705MGP_SPRETEiJ_G0018027Rab5c9989.862Mus_spretus
ENSAMXG00000043717rab5c9990.826ENSMPUG00000010554RAB5C9989.862Mustela_putorius_furo
ENSAMXG00000043717rab5c9891.244ENSNGAG00000010286Rab5c9989.401Nannospalax_galili
ENSAMXG00000043717rab5c10096.833ENSNBRG00000018165rab5c10096.833Neolamprologus_brichardi
ENSAMXG00000043717rab5c9690.141ENSNBRG00000016922-10088.789Neolamprologus_brichardi
ENSAMXG00000043717rab5c8188.827ENSOPRG00000008255RAB5C10088.827Ochotona_princeps
ENSAMXG00000043717rab5c9890.783ENSODEG00000017920RAB5C9988.940Octodon_degus
ENSAMXG00000043717rab5c10096.833ENSONIG00000001113rab5c10096.833Oreochromis_niloticus
ENSAMXG00000043717rab5c9996.330ENSORLG00000003882rab5c9996.330Oryzias_latipes
ENSAMXG00000043717rab5c9996.330ENSORLG00020008388rab5c9996.330Oryzias_latipes_hni
ENSAMXG00000043717rab5c9996.330ENSORLG00015021900rab5c9996.330Oryzias_latipes_hsok
ENSAMXG00000043717rab5c9996.330ENSOMEG00000023078rab5c9996.330Oryzias_melastigma
ENSAMXG00000043717rab5c9891.705ENSOGAG00000009456RAB5C9989.862Otolemur_garnettii
ENSAMXG00000043717rab5c9891.244ENSOARG00000018768RAB5C9989.401Ovis_aries
ENSAMXG00000043717rab5c9891.244ENSPPAG00000037206RAB5C9989.862Pan_paniscus
ENSAMXG00000043717rab5c9891.244ENSPPRG00000005745RAB5C9989.401Panthera_pardus
ENSAMXG00000043717rab5c9891.244ENSPTIG00000008177RAB5C9989.401Panthera_tigris_altaica
ENSAMXG00000043717rab5c9891.244ENSPTRG00000009194RAB5C9989.862Pan_troglodytes
ENSAMXG00000043717rab5c9889.862ENSPKIG00000001237-9987.558Paramormyrops_kingsleyae
ENSAMXG00000043717rab5c9889.401ENSPKIG00000020112-9989.401Paramormyrops_kingsleyae
ENSAMXG00000043717rab5c10094.118ENSPMGG00000010792rab5c9995.833Periophthalmus_magnuspinnatus
ENSAMXG00000043717rab5c9891.705ENSPEMG00000017971Rab5c9989.401Peromyscus_maniculatus_bairdii
ENSAMXG00000043717rab5c9878.733ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSAMXG00000043717rab5c9081.313ENSPMAG00000007867rab5c8983.598Petromyzon_marinus
ENSAMXG00000043717rab5c9976.147ENSPMAG00000001399rab5c9977.419Petromyzon_marinus
ENSAMXG00000043717rab5c9990.826ENSPCIG00000020225-9989.862Phascolarctos_cinereus
ENSAMXG00000043717rab5c9990.909ENSPLAG00000016333-10090.909Poecilia_latipinna
ENSAMXG00000043717rab5c10097.738ENSPLAG00000004790rab5c10097.738Poecilia_latipinna
ENSAMXG00000043717rab5c9692.056ENSPMEG00000012614-10090.625Poecilia_mexicana
ENSAMXG00000043717rab5c10097.738ENSPMEG00000011336rab5c10097.738Poecilia_mexicana
ENSAMXG00000043717rab5c8890.256ENSPREG00000022167-8993.478Poecilia_reticulata
ENSAMXG00000043717rab5c10097.738ENSPREG00000010146rab5c10097.738Poecilia_reticulata
ENSAMXG00000043717rab5c9891.244ENSPPYG00000008398RAB5C9989.862Pongo_abelii
ENSAMXG00000043717rab5c9890.323ENSPCAG00000016412RAB5C9988.479Procavia_capensis
ENSAMXG00000043717rab5c9891.244ENSPCOG00000026327RAB5C9989.401Propithecus_coquereli
ENSAMXG00000043717rab5c9891.705ENSPVAG00000003867RAB5C9989.862Pteropus_vampyrus
ENSAMXG00000043717rab5c9690.141ENSPNYG00000015851-10088.789Pundamilia_nyererei
ENSAMXG00000043717rab5c10095.928ENSPNYG00000010615rab5c10095.928Pundamilia_nyererei
ENSAMXG00000043717rab5c9988.128ENSPNAG00000002218-9988.128Pygocentrus_nattereri
ENSAMXG00000043717rab5c10098.643ENSPNAG00000028138rab5c10098.643Pygocentrus_nattereri
ENSAMXG00000043717rab5c9891.705ENSRNOG00000018568Rab5c9989.862Rattus_norvegicus
ENSAMXG00000043717rab5c9891.244ENSRBIG00000031376RAB5C9989.862Rhinopithecus_bieti
ENSAMXG00000043717rab5c9891.244ENSRROG00000032895RAB5C9989.862Rhinopithecus_roxellana
ENSAMXG00000043717rab5c9891.244ENSSBOG00000032552-9989.401Saimiri_boliviensis_boliviensis
ENSAMXG00000043717rab5c9891.705ENSSHAG00000005267-9990.323Sarcophilus_harrisii
ENSAMXG00000043717rab5c10088.688ENSSFOG00015009988-10088.688Scleropages_formosus
ENSAMXG00000043717rab5c10096.380ENSSMAG00000007323rab5c10096.380Scophthalmus_maximus
ENSAMXG00000043717rab5c10097.285ENSSDUG00000023008rab5c10097.285Seriola_dumerili
ENSAMXG00000043717rab5c10096.380ENSSLDG00000017771rab5c10096.380Seriola_lalandi_dorsalis
ENSAMXG00000043717rab5c9891.705ENSSPUG00000012950-9989.862Sphenodon_punctatus
ENSAMXG00000043717rab5c10098.190ENSSPAG00000006436rab5c10098.190Stegastes_partitus
ENSAMXG00000043717rab5c9891.244ENSSSCG00000032467RAB5C9989.401Sus_scrofa
ENSAMXG00000043717rab5c10095.475ENSTRUG00000015590rab5c10095.475Takifugu_rubripes
ENSAMXG00000043717rab5c9697.170ENSTNIG00000011711rab5c9597.170Tetraodon_nigroviridis
ENSAMXG00000043717rab5c9891.244ENSTBEG00000007092RAB5C9989.862Tupaia_belangeri
ENSAMXG00000043717rab5c9990.367ENSTTRG00000006673RAB5C9988.940Tursiops_truncatus
ENSAMXG00000043717rab5c9990.826ENSUAMG00000024343RAB5C9989.862Ursus_americanus
ENSAMXG00000043717rab5c9990.826ENSUMAG00000023270RAB5C9989.862Ursus_maritimus
ENSAMXG00000043717rab5c10097.285ENSXCOG00000016788rab5c10097.285Xiphophorus_couchianus
ENSAMXG00000043717rab5c9592.381ENSXCOG00000006300-9990.135Xiphophorus_couchianus
ENSAMXG00000043717rab5c10097.738ENSXMAG00000003266rab5c10097.738Xiphophorus_maculatus
ENSAMXG00000043717rab5c9990.455ENSXMAG00000022179-10090.455Xiphophorus_maculatus

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