EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000043778 (Gene tree)
Gene ID: 103039849
Gene Symbol: cd3eap
Alias: cd3ap
Full Name: DNA-directed RNA polymerase I subunit RPA34
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6681 bases
Position: chr1:14514284-14520964
Accession: 103039849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052289	RNA_polI_A34	PF08208.11	9.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000056958	-	5460	XM_007236825	ENSAMXP00000052289	302 (aa)	XP_007236887	UPI000440E929

Gene Model

Click here to download ENSAMXG00000043778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043778	cd3eap	54	50.292	ENSAPOG00000001121	cd3eap	83	42.574	Acanthochromis_polyacanthus
ENSAMXG00000043778	cd3eap	54	49.708	ENSAOCG00000007088	cd3eap	83	42.053	Amphiprion_ocellaris
ENSAMXG00000043778	cd3eap	54	50.292	ENSAPEG00000016153	cd3eap	83	42.384	Amphiprion_percula
ENSAMXG00000043778	cd3eap	59	44.086	ENSATEG00000006485	cd3eap	92	38.739	Anabas_testudineus
ENSAMXG00000043778	cd3eap	58	47.027	ENSACLG00000018258	cd3eap	53	47.027	Astatotilapia_calliptera
ENSAMXG00000043778	cd3eap	52	36.709	ENSCPBG00000014383	-	55	36.774	Chrysemys_picta_bellii
ENSAMXG00000043778	cd3eap	56	45.455	ENSCVAG00000000356	cd3eap	51	46.961	Cyprinodon_variegatus
ENSAMXG00000043778	cd3eap	71	53.271	ENSDARG00000090386	cd3eap	98	45.673	Danio_rerio
ENSAMXG00000043778	cd3eap	95	41.613	ENSELUG00000012387	cd3eap	95	41.613	Esox_lucius
ENSAMXG00000043778	cd3eap	56	44.186	ENSGAFG00000003667	cd3eap	52	44.633	Gambusia_affinis
ENSAMXG00000043778	cd3eap	54	44.444	ENSGACG00000012623	cd3eap	76	43.243	Gasterosteus_aculeatus
ENSAMXG00000043778	cd3eap	59	35.393	ENSGAGG00000016535	-	60	35.429	Gopherus_agassizii
ENSAMXG00000043778	cd3eap	58	47.027	ENSHBUG00000001063	cd3eap	53	47.027	Haplochromis_burtoni
ENSAMXG00000043778	cd3eap	69	36.404	ENSHCOG00000019142	-	87	36.585	Hippocampus_comes
ENSAMXG00000043778	cd3eap	90	55.474	ENSIPUG00000019546	cd3eap	90	55.109	Ictalurus_punctatus
ENSAMXG00000043778	cd3eap	51	47.205	ENSKMAG00000015084	cd3eap	53	45.556	Kryptolebias_marmoratus
ENSAMXG00000043778	cd3eap	53	38.415	ENSLACG00000013798	-	50	35.979	Latimeria_chalumnae
ENSAMXG00000043778	cd3eap	71	42.291	ENSLOCG00000014803	cd3eap	73	42.291	Lepisosteus_oculatus
ENSAMXG00000043778	cd3eap	54	46.784	ENSMAMG00000016319	cd3eap	93	40.187	Mastacembelus_armatus
ENSAMXG00000043778	cd3eap	58	47.027	ENSMZEG00005024408	cd3eap	53	47.027	Maylandia_zebra
ENSAMXG00000043778	cd3eap	88	41.554	ENSMALG00000010452	cd3eap	92	41.325	Monopterus_albus
ENSAMXG00000043778	cd3eap	57	46.995	ENSNBRG00000016766	cd3eap	53	47.568	Neolamprologus_brichardi
ENSAMXG00000043778	cd3eap	57	41.954	ENSPFOG00000016410	cd3eap	68	42.614	Poecilia_formosa
ENSAMXG00000043778	cd3eap	57	41.379	ENSPLAG00000023890	cd3eap	51	42.045	Poecilia_latipinna
ENSAMXG00000043778	cd3eap	57	41.954	ENSPMEG00000019111	cd3eap	51	42.614	Poecilia_mexicana
ENSAMXG00000043778	cd3eap	52	44.025	ENSPREG00000018959	-	50	43.182	Poecilia_reticulata
ENSAMXG00000043778	cd3eap	58	47.027	ENSPNYG00000022270	cd3eap	53	47.027	Pundamilia_nyererei
ENSAMXG00000043778	cd3eap	95	66.436	ENSPNAG00000005779	cd3eap	93	66.782	Pygocentrus_nattereri
ENSAMXG00000043778	cd3eap	58	41.243	ENSSFOG00015004233	cd3eap	79	40.000	Scleropages_formosus
ENSAMXG00000043778	cd3eap	58	44.022	ENSSMAG00000020182	cd3eap	54	44.262	Scophthalmus_maximus
ENSAMXG00000043778	cd3eap	53	45.294	ENSSDUG00000001874	cd3eap	93	39.498	Seriola_dumerili
ENSAMXG00000043778	cd3eap	53	45.294	ENSSLDG00000003180	cd3eap	92	39.498	Seriola_lalandi_dorsalis
ENSAMXG00000043778	cd3eap	54	50.289	ENSSPAG00000014760	-	93	42.671	Stegastes_partitus
ENSAMXG00000043778	cd3eap	57	44.828	ENSXMAG00000013127	cd3eap	52	45.763	Xiphophorus_maculatus