EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000043821 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2244 bases
Position: chrAPWO02000099.1:191610-193853
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039402	RVT_1	PF00078.27	1.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043665	-	2244	-	ENSAMXP00000039402	747 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000043821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000043821	-	93	39.828	ENSAMXG00000041896	-	92	39.714
ENSAMXG00000043821	-	97	42.055	ENSAMXG00000040885	-	51	41.940
ENSAMXG00000043821	-	99	39.786	ENSAMXG00000032783	-	52	39.786
ENSAMXG00000043821	-	81	45.897	ENSAMXG00000033197	-	82	45.897
ENSAMXG00000043821	-	85	34.173	ENSAMXG00000039114	-	60	34.173
ENSAMXG00000043821	-	97	38.606	ENSAMXG00000039110	-	51	38.606
ENSAMXG00000043821	-	53	64.467	ENSAMXG00000042777	-	52	64.467
ENSAMXG00000043821	-	89	37.518	ENSAMXG00000038480	-	90	37.518
ENSAMXG00000043821	-	98	38.420	ENSAMXG00000034382	-	58	37.790
ENSAMXG00000043821	-	73	32.474	ENSAMXG00000037157	-	60	32.474
ENSAMXG00000043821	-	73	31.329	ENSAMXG00000033786	-	81	31.329
ENSAMXG00000043821	-	97	43.019	ENSAMXG00000036113	-	65	47.321
ENSAMXG00000043821	-	82	33.887	ENSAMXG00000037673	-	64	33.887
ENSAMXG00000043821	-	69	34.877	ENSAMXG00000038310	-	54	34.877
ENSAMXG00000043821	-	99	37.949	ENSAMXG00000041369	-	59	37.949
ENSAMXG00000043821	-	83	41.274	ENSAMXG00000037864	-	53	41.274
ENSAMXG00000043821	-	98	58.255	ENSAMXG00000030908	-	61	58.255
ENSAMXG00000043821	-	51	34.704	ENSAMXG00000043469	-	77	34.704
ENSAMXG00000043821	-	65	37.223	ENSAMXG00000043631	-	56	37.223
ENSAMXG00000043821	-	93	37.518	ENSAMXG00000041114	-	67	37.518
ENSAMXG00000043821	-	96	38.806	ENSAMXG00000039473	-	62	38.806
ENSAMXG00000043821	-	86	43.802	ENSAMXG00000033912	-	53	43.802
ENSAMXG00000043821	-	73	32.500	ENSAMXG00000031305	-	54	32.500
ENSAMXG00000043821	-	93	37.482	ENSAMXG00000035923	-	81	36.714
ENSAMXG00000043821	-	59	58.150	ENSAMXG00000041465	-	62	58.150
ENSAMXG00000043821	-	76	36.097	ENSAMXG00000030761	-	72	36.097
ENSAMXG00000043821	-	97	38.608	ENSAMXG00000030022	-	58	38.608

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043821	-	88	65.653	ENSAPOG00000015320	-	59	65.309	Acanthochromis_polyacanthus
ENSAMXG00000043821	-	69	43.216	ENSAPEG00000002572	-	53	43.216	Amphiprion_percula
ENSAMXG00000043821	-	97	40.327	ENSAPEG00000002424	-	50	40.408	Amphiprion_percula
ENSAMXG00000043821	-	74	36.252	ENSAPEG00000006765	-	81	36.427	Amphiprion_percula
ENSAMXG00000043821	-	97	35.175	ENSAPEG00000015494	-	53	35.445	Amphiprion_percula
ENSAMXG00000043821	-	84	37.604	ENSATEG00000018698	-	53	37.604	Anabas_testudineus
ENSAMXG00000043821	-	97	34.730	ENSATEG00000016298	-	64	34.730	Anabas_testudineus
ENSAMXG00000043821	-	84	31.405	ENSATEG00000019692	-	50	31.405	Anabas_testudineus
ENSAMXG00000043821	-	93	57.365	ENSATEG00000006997	-	74	57.365	Anabas_testudineus
ENSAMXG00000043821	-	97	35.589	ENSACLG00000019658	-	50	35.859	Astatotilapia_calliptera
ENSAMXG00000043821	-	99	37.778	ENSACLG00000005531	-	52	37.778	Astatotilapia_calliptera
ENSAMXG00000043821	-	81	34.606	ENSACLG00000016581	-	52	34.606	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	36.070	ENSACLG00000001267	-	60	36.070	Astatotilapia_calliptera
ENSAMXG00000043821	-	99	39.314	ENSACLG00000016624	-	51	39.314	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	40.217	ENSACLG00000010542	-	54	40.217	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	38.338	ENSACLG00000001282	-	50	38.606	Astatotilapia_calliptera
ENSAMXG00000043821	-	77	32.055	ENSACLG00000004561	-	52	32.055	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	40.629	ENSACLG00000015880	-	51	40.629	Astatotilapia_calliptera
ENSAMXG00000043821	-	98	38.995	ENSACLG00000018344	-	59	39.160	Astatotilapia_calliptera
ENSAMXG00000043821	-	98	57.510	ENSACLG00000008010	-	65	57.510	Astatotilapia_calliptera
ENSAMXG00000043821	-	91	34.343	ENSACLG00000017258	-	64	34.343	Astatotilapia_calliptera
ENSAMXG00000043821	-	93	56.125	ENSACLG00000021355	-	85	55.966	Astatotilapia_calliptera
ENSAMXG00000043821	-	99	38.757	ENSACLG00000000373	-	63	38.757	Astatotilapia_calliptera
ENSAMXG00000043821	-	98	68.598	ENSACLG00000020048	-	51	68.598	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	36.032	ENSACLG00000018454	-	59	36.474	Astatotilapia_calliptera
ENSAMXG00000043821	-	99	38.624	ENSACLG00000012657	-	63	38.757	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	35.811	ENSACLG00000024387	-	56	35.811	Astatotilapia_calliptera
ENSAMXG00000043821	-	74	33.333	ENSACLG00000019989	-	59	33.333	Astatotilapia_calliptera
ENSAMXG00000043821	-	83	43.526	ENSACLG00000014688	-	54	43.526	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	37.620	ENSACLG00000013947	-	63	37.620	Astatotilapia_calliptera
ENSAMXG00000043821	-	99	39.442	ENSACLG00000009118	-	50	39.442	Astatotilapia_calliptera
ENSAMXG00000043821	-	97	35.453	ENSACLG00000002182	-	50	35.724	Astatotilapia_calliptera
ENSAMXG00000043821	-	78	31.081	ENSACLG00000012278	-	68	31.081	Astatotilapia_calliptera
ENSAMXG00000043821	-	88	34.913	ENSACLG00000027627	-	50	35.965	Astatotilapia_calliptera
ENSAMXG00000043821	-	79	34.586	ENSACLG00000024556	-	65	35.526	Astatotilapia_calliptera
ENSAMXG00000043821	-	69	30.447	ENSCING00000021231	-	64	31.288	Ciona_intestinalis
ENSAMXG00000043821	-	78	35.430	ENSCVAG00000020907	-	67	35.430	Cyprinodon_variegatus
ENSAMXG00000043821	-	97	34.865	ENSCVAG00000019395	-	51	33.824	Cyprinodon_variegatus
ENSAMXG00000043821	-	91	35.362	ENSGAFG00000014674	-	61	35.029	Gambusia_affinis
ENSAMXG00000043821	-	97	38.083	ENSGAFG00000016352	-	56	38.349	Gambusia_affinis
ENSAMXG00000043821	-	68	33.742	ENSHBUG00000016445	-	89	33.742	Haplochromis_burtoni
ENSAMXG00000043821	-	97	39.136	ENSHCOG00000012267	-	59	39.136	Hippocampus_comes
ENSAMXG00000043821	-	52	31.343	ENSIPUG00000003645	-	75	31.343	Ictalurus_punctatus
ENSAMXG00000043821	-	96	30.632	ENSKMAG00000010491	-	50	30.220	Kryptolebias_marmoratus
ENSAMXG00000043821	-	96	30.632	ENSKMAG00000003018	-	50	30.220	Kryptolebias_marmoratus
ENSAMXG00000043821	-	96	30.632	ENSKMAG00000022204	-	50	30.220	Kryptolebias_marmoratus
ENSAMXG00000043821	-	64	32.642	ENSLACG00000007522	-	68	32.642	Latimeria_chalumnae
ENSAMXG00000043821	-	73	31.657	ENSLACG00000016441	-	71	31.657	Latimeria_chalumnae
ENSAMXG00000043821	-	73	36.047	ENSLACG00000012109	-	92	36.047	Latimeria_chalumnae
ENSAMXG00000043821	-	62	31.864	ENSLACG00000005007	-	68	31.741	Latimeria_chalumnae
ENSAMXG00000043821	-	75	38.860	ENSLACG00000006151	-	74	38.860	Latimeria_chalumnae
ENSAMXG00000043821	-	73	34.540	ENSLACG00000003991	-	60	34.540	Latimeria_chalumnae
ENSAMXG00000043821	-	79	37.709	ENSLACG00000009524	-	63	37.709	Latimeria_chalumnae
ENSAMXG00000043821	-	75	33.096	ENSLACG00000009347	-	78	33.096	Latimeria_chalumnae
ENSAMXG00000043821	-	76	61.616	ENSLACG00000006413	-	79	61.616	Latimeria_chalumnae
ENSAMXG00000043821	-	89	44.321	ENSLACG00000008450	-	82	44.321	Latimeria_chalumnae
ENSAMXG00000043821	-	61	31.308	ENSLACG00000018380	-	67	32.203	Latimeria_chalumnae
ENSAMXG00000043821	-	66	30.612	ENSLACG00000009011	-	66	30.612	Latimeria_chalumnae
ENSAMXG00000043821	-	70	30.599	ENSLACG00000002512	-	85	30.599	Latimeria_chalumnae
ENSAMXG00000043821	-	70	30.811	ENSLACG00000016980	-	55	30.811	Latimeria_chalumnae
ENSAMXG00000043821	-	97	37.174	ENSLACG00000010043	-	67	43.767	Latimeria_chalumnae
ENSAMXG00000043821	-	73	31.653	ENSLACG00000007830	-	69	31.653	Latimeria_chalumnae
ENSAMXG00000043821	-	60	35.526	ENSMAMG00000004646	-	93	34.483	Mastacembelus_armatus
ENSAMXG00000043821	-	53	31.605	ENSMAMG00000019918	-	61	31.605	Mastacembelus_armatus
ENSAMXG00000043821	-	77	34.701	ENSMAMG00000016004	-	82	34.701	Mastacembelus_armatus
ENSAMXG00000043821	-	84	35.329	ENSMAMG00000021634	-	88	35.329	Mastacembelus_armatus
ENSAMXG00000043821	-	88	38.095	ENSMZEG00005023862	-	58	38.095	Maylandia_zebra
ENSAMXG00000043821	-	83	34.167	ENSMZEG00005024252	-	68	34.167	Maylandia_zebra
ENSAMXG00000043821	-	98	59.023	ENSMZEG00005025542	-	56	59.023	Maylandia_zebra
ENSAMXG00000043821	-	57	62.162	ENSMZEG00005004899	-	55	62.162	Maylandia_zebra
ENSAMXG00000043821	-	98	39.008	ENSMALG00000020759	-	54	39.276	Monopterus_albus
ENSAMXG00000043821	-	50	31.915	ENSORLG00000027231	-	66	31.915	Oryzias_latipes
ENSAMXG00000043821	-	97	58.425	ENSORLG00000028175	-	50	58.425	Oryzias_latipes
ENSAMXG00000043821	-	98	57.182	ENSORLG00000027307	-	60	57.182	Oryzias_latipes
ENSAMXG00000043821	-	96	38.036	ENSORLG00000025268	-	83	38.036	Oryzias_latipes
ENSAMXG00000043821	-	97	39.945	ENSORLG00000025397	-	65	39.945	Oryzias_latipes
ENSAMXG00000043821	-	99	38.057	ENSORLG00000027117	-	51	38.057	Oryzias_latipes
ENSAMXG00000043821	-	96	39.406	ENSORLG00000024878	-	72	39.242	Oryzias_latipes
ENSAMXG00000043821	-	97	39.617	ENSORLG00000028051	-	50	39.510	Oryzias_latipes
ENSAMXG00000043821	-	97	31.918	ENSORLG00000023550	-	51	31.918	Oryzias_latipes
ENSAMXG00000043821	-	96	38.643	ENSORLG00000029184	-	86	38.536	Oryzias_latipes
ENSAMXG00000043821	-	78	31.818	ENSORLG00000028879	-	59	31.818	Oryzias_latipes
ENSAMXG00000043821	-	97	35.510	ENSORLG00000025132	-	53	35.510	Oryzias_latipes
ENSAMXG00000043821	-	88	32.231	ENSORLG00020009084	-	76	32.231	Oryzias_latipes_hni
ENSAMXG00000043821	-	97	35.821	ENSORLG00020015203	-	62	35.821	Oryzias_latipes_hni
ENSAMXG00000043821	-	85	36.413	ENSORLG00020016695	-	82	36.413	Oryzias_latipes_hni
ENSAMXG00000043821	-	91	38.596	ENSORLG00020018561	-	67	38.484	Oryzias_latipes_hni
ENSAMXG00000043821	-	97	37.893	ENSORLG00020016398	-	51	37.790	Oryzias_latipes_hni
ENSAMXG00000043821	-	77	33.604	ENSORLG00020019030	-	60	33.604	Oryzias_latipes_hni
ENSAMXG00000043821	-	98	38.639	ENSORLG00020017608	-	65	38.639	Oryzias_latipes_hni
ENSAMXG00000043821	-	97	31.044	ENSORLG00020016001	-	50	31.044	Oryzias_latipes_hni
ENSAMXG00000043821	-	97	39.481	ENSORLG00020000868	-	52	39.481	Oryzias_latipes_hni
ENSAMXG00000043821	-	78	32.308	ENSORLG00020000592	-	63	32.308	Oryzias_latipes_hni
ENSAMXG00000043821	-	98	57.666	ENSORLG00015018293	-	60	57.317	Oryzias_latipes_hsok
ENSAMXG00000043821	-	97	39.446	ENSORLG00015000379	-	93	39.446	Oryzias_latipes_hsok
ENSAMXG00000043821	-	86	44.199	ENSORLG00015001207	-	52	44.199	Oryzias_latipes_hsok
ENSAMXG00000043821	-	97	39.672	ENSORLG00015010457	-	52	39.672	Oryzias_latipes_hsok
ENSAMXG00000043821	-	82	31.395	ENSORLG00015010510	-	92	31.395	Oryzias_latipes_hsok
ENSAMXG00000043821	-	75	36.994	ENSORLG00015022127	-	69	36.994	Oryzias_latipes_hsok
ENSAMXG00000043821	-	79	31.880	ENSORLG00015003846	-	58	31.880	Oryzias_latipes_hsok
ENSAMXG00000043821	-	97	32.329	ENSORLG00015008388	-	67	31.824	Oryzias_latipes_hsok
ENSAMXG00000043821	-	97	35.334	ENSORLG00015017494	-	55	35.334	Oryzias_latipes_hsok
ENSAMXG00000043821	-	85	37.228	ENSORLG00015000130	-	54	37.228	Oryzias_latipes_hsok
ENSAMXG00000043821	-	84	43.360	ENSORLG00015012565	-	53	43.360	Oryzias_latipes_hsok
ENSAMXG00000043821	-	84	45.879	ENSORLG00015022011	-	56	45.879	Oryzias_latipes_hsok
ENSAMXG00000043821	-	53	33.416	ENSOMEG00000005634	-	50	33.416	Oryzias_melastigma
ENSAMXG00000043821	-	97	36.512	ENSOMEG00000001995	-	57	36.512	Oryzias_melastigma
ENSAMXG00000043821	-	98	35.014	ENSOMEG00000012600	-	76	35.014	Oryzias_melastigma
ENSAMXG00000043821	-	82	31.018	ENSOMEG00000013479	-	86	31.018	Oryzias_melastigma
ENSAMXG00000043821	-	95	37.689	ENSOMEG00000000573	-	61	36.921	Oryzias_melastigma
ENSAMXG00000043821	-	89	32.689	ENSPKIG00000012990	-	87	33.844	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	97	35.095	ENSPKIG00000020363	-	57	34.912	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	97	34.097	ENSPKIG00000013624	-	58	34.097	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	65	34.800	ENSPKIG00000004057	-	100	34.600	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	98	58.311	ENSPKIG00000012188	-	53	58.311	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	97	41.176	ENSPKIG00000007924	-	71	41.176	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	97	36.277	ENSPKIG00000020388	-	52	35.918	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	92	31.079	ENSPKIG00000006120	-	68	31.178	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	74	36.315	ENSPKIG00000003982	-	100	35.842	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	85	31.978	ENSPKIG00000006845	-	53	31.978	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	77	34.340	ENSPKIG00000021090	-	63	34.340	Paramormyrops_kingsleyae
ENSAMXG00000043821	-	97	33.834	ENSPMEG00000008618	-	56	34.060	Poecilia_mexicana
ENSAMXG00000043821	-	97	38.988	ENSPMEG00000023031	-	60	38.714	Poecilia_mexicana
ENSAMXG00000043821	-	97	39.617	ENSPREG00000006052	-	62	39.617	Poecilia_reticulata
ENSAMXG00000043821	-	98	31.880	ENSPREG00000006122	-	85	31.880	Poecilia_reticulata
ENSAMXG00000043821	-	71	36.503	ENSPREG00000006650	-	94	36.503	Poecilia_reticulata
ENSAMXG00000043821	-	86	43.288	ENSPREG00000006496	-	80	42.742	Poecilia_reticulata
ENSAMXG00000043821	-	97	30.299	ENSPREG00000005134	-	54	30.027	Poecilia_reticulata
ENSAMXG00000043821	-	84	45.278	ENSPNAG00000021509	-	62	45.278	Pygocentrus_nattereri
ENSAMXG00000043821	-	54	31.796	ENSPNAG00000009058	-	75	31.796	Pygocentrus_nattereri
ENSAMXG00000043821	-	98	40.841	ENSPNAG00000017165	-	51	40.489	Pygocentrus_nattereri
ENSAMXG00000043821	-	78	38.748	ENSPNAG00000009767	-	55	38.748	Pygocentrus_nattereri
ENSAMXG00000043821	-	91	38.873	ENSSDUG00000010222	-	63	39.162	Seriola_dumerili
ENSAMXG00000043821	-	85	35.376	ENSSDUG00000010009	-	61	35.376	Seriola_dumerili
ENSAMXG00000043821	-	69	32.515	ENSTRUG00000021236	-	76	32.515	Takifugu_rubripes
ENSAMXG00000043821	-	77	34.444	ENSTNIG00000006817	-	54	34.444	Tetraodon_nigroviridis
ENSAMXG00000043821	-	91	38.640	ENSXMAG00000024180	-	63	38.307	Xiphophorus_maculatus
ENSAMXG00000043821	-	82	33.149	ENSXMAG00000025957	-	96	33.149	Xiphophorus_maculatus
ENSAMXG00000043821	-	97	38.798	ENSXMAG00000022159	-	54	38.577	Xiphophorus_maculatus
ENSAMXG00000043821	-	98	71.930	ENSXMAG00000021440	-	58	71.930	Xiphophorus_maculatus
ENSAMXG00000043821	-	97	35.034	ENSXMAG00000025551	-	60	35.121	Xiphophorus_maculatus
ENSAMXG00000043821	-	96	39.835	ENSXMAG00000029360	-	70	39.835	Xiphophorus_maculatus
ENSAMXG00000043821	-	98	71.795	ENSXMAG00000025715	-	50	71.795	Xiphophorus_maculatus
ENSAMXG00000043821	-	98	36.562	ENSXMAG00000026865	-	50	36.562	Xiphophorus_maculatus
ENSAMXG00000043821	-	97	38.731	ENSXMAG00000021254	-	50	38.731	Xiphophorus_maculatus
ENSAMXG00000043821	-	98	39.488	ENSXMAG00000023370	-	64	39.488	Xiphophorus_maculatus