EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000043822 (Gene tree)
Gene ID: 103033340
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 111840 bases
Position: chrAPWO02001329.1:928104-1039943
Accession: 103033340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028321	SHQ1	PF04925.15	5e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000036381	-	1698	XM_022662737	ENSAMXP00000028321	565 (aa)	XP_022518458	-

Gene Model

Click here to download ENSAMXG00000043822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043822	shq1	90	49.907	ENSG00000144736	SHQ1	96	79.167	Homo_sapiens
ENSAMXG00000043822	shq1	75	65.893	ENSAPOG00000000397	shq1	70	65.808	Acanthochromis_polyacanthus
ENSAMXG00000043822	shq1	78	54.185	ENSAMEG00000015140	SHQ1	75	54.167	Ailuropoda_melanoleuca
ENSAMXG00000043822	shq1	75	65.589	ENSACIG00000021249	shq1	70	65.566	Amphilophus_citrinellus
ENSAMXG00000043822	shq1	98	54.032	ENSAOCG00000023311	shq1	76	63.113	Amphiprion_ocellaris
ENSAMXG00000043822	shq1	98	54.146	ENSAPEG00000021686	shq1	75	63.537	Amphiprion_percula
ENSAMXG00000043822	shq1	75	65.668	ENSATEG00000008475	shq1	70	65.023	Anabas_testudineus
ENSAMXG00000043822	shq1	75	55.102	ENSAPLG00000013926	SHQ1	85	55.427	Anas_platyrhynchos
ENSAMXG00000043822	shq1	73	54.884	ENSACAG00000014809	SHQ1	64	55.427	Anolis_carolinensis
ENSAMXG00000043822	shq1	90	49.721	ENSANAG00000029241	SHQ1	75	54.756	Aotus_nancymaae
ENSAMXG00000043822	shq1	83	42.340	ENSANAG00000030500	-	72	43.237	Aotus_nancymaae
ENSAMXG00000043822	shq1	75	64.450	ENSACLG00000023077	shq1	68	64.169	Astatotilapia_calliptera
ENSAMXG00000043822	shq1	65	59.103	ENSBTAG00000005436	SHQ1	74	55.787	Bos_taurus
ENSAMXG00000043822	shq1	65	30.645	WBGene00021655	Y48A5A.1	83	30.376	Caenorhabditis_elegans
ENSAMXG00000043822	shq1	90	49.536	ENSCJAG00000015131	SHQ1	74	55.220	Callithrix_jacchus
ENSAMXG00000043822	shq1	65	56.728	ENSCAFG00000006434	SHQ1	74	54.861	Canis_familiaris
ENSAMXG00000043822	shq1	65	56.992	ENSCAFG00020016743	SHQ1	74	55.093	Canis_lupus_dingo
ENSAMXG00000043822	shq1	65	59.103	ENSCHIG00000012271	SHQ1	68	56.019	Capra_hircus
ENSAMXG00000043822	shq1	71	53.511	ENSTSYG00000014439	SHQ1	75	52.791	Carlito_syrichta
ENSAMXG00000043822	shq1	82	41.551	ENSCAPG00000009343	SHQ1	70	47.606	Cavia_aperea
ENSAMXG00000043822	shq1	77	53.642	ENSCPOG00000011443	SHQ1	74	54.630	Cavia_porcellus
ENSAMXG00000043822	shq1	71	46.377	ENSCCAG00000027080	SHQ1	73	45.370	Cebus_capucinus
ENSAMXG00000043822	shq1	81	42.765	ENSCCAG00000036087	-	73	43.990	Cebus_capucinus
ENSAMXG00000043822	shq1	71	55.556	ENSCATG00000041238	SHQ1	74	54.524	Cercocebus_atys
ENSAMXG00000043822	shq1	74	55.734	ENSCLAG00000004206	SHQ1	75	54.861	Chinchilla_lanigera
ENSAMXG00000043822	shq1	55	50.769	ENSCSAG00000011514	SHQ1	70	50.000	Chlorocebus_sabaeus
ENSAMXG00000043822	shq1	75	56.818	ENSCPBG00000006441	SHQ1	70	56.713	Chrysemys_picta_bellii
ENSAMXG00000043822	shq1	65	38.770	ENSCING00000008013	-	94	37.442	Ciona_intestinalis
ENSAMXG00000043822	shq1	65	36.533	ENSCSAVG00000002332	-	97	34.426	Ciona_savignyi
ENSAMXG00000043822	shq1	90	49.351	ENSCANG00000039295	SHQ1	75	54.756	Colobus_angolensis_palliatus
ENSAMXG00000043822	shq1	78	53.524	ENSCGRG00001012583	Shq1	76	54.398	Cricetulus_griseus_chok1gshd
ENSAMXG00000043822	shq1	78	53.524	ENSCGRG00000009849	Shq1	76	54.398	Cricetulus_griseus_crigri
ENSAMXG00000043822	shq1	71	67.153	ENSCSEG00000007829	shq1	69	67.136	Cynoglossus_semilaevis
ENSAMXG00000043822	shq1	97	58.844	ENSDARG00000058522	shq1	72	69.575	Danio_rerio
ENSAMXG00000043822	shq1	94	48.566	ENSDNOG00000033937	SHQ1	75	54.861	Dasypus_novemcinctus
ENSAMXG00000043822	shq1	71	50.120	ENSETEG00000005766	SHQ1	75	49.537	Echinops_telfairi
ENSAMXG00000043822	shq1	63	42.507	ENSEBUG00000005445	shq1	76	44.478	Eptatretus_burgeri
ENSAMXG00000043822	shq1	92	50.929	ENSEASG00005002237	SHQ1	75	56.019	Equus_asinus_asinus
ENSAMXG00000043822	shq1	92	51.115	ENSECAG00000015673	SHQ1	73	56.019	Equus_caballus
ENSAMXG00000043822	shq1	75	56.364	ENSEEUG00000010568	SHQ1	75	55.324	Erinaceus_europaeus
ENSAMXG00000043822	shq1	65	69.459	ENSELUG00000003476	shq1	79	69.459	Esox_lucius
ENSAMXG00000043822	shq1	86	51.683	ENSFCAG00000012781	SHQ1	75	54.861	Felis_catus
ENSAMXG00000043822	shq1	71	57.279	ENSFALG00000013428	SHQ1	70	57.506	Ficedula_albicollis
ENSAMXG00000043822	shq1	71	56.039	ENSFDAG00000005595	SHQ1	66	56.148	Fukomys_damarensis
ENSAMXG00000043822	shq1	75	63.194	ENSFHEG00000017552	shq1	73	62.763	Fundulus_heteroclitus
ENSAMXG00000043822	shq1	65	66.129	ENSGMOG00000007350	shq1	95	65.591	Gadus_morhua
ENSAMXG00000043822	shq1	74	56.322	ENSGALG00000007798	SHQ1	70	56.019	Gallus_gallus
ENSAMXG00000043822	shq1	65	67.925	ENSGACG00000011797	shq1	95	68.733	Gasterosteus_aculeatus
ENSAMXG00000043822	shq1	90	49.351	ENSGGOG00000034818	SHQ1	74	54.756	Gorilla_gorilla
ENSAMXG00000043822	shq1	65	57.520	ENSHGLG00000003637	SHQ1	67	53.811	Heterocephalus_glaber_female
ENSAMXG00000043822	shq1	65	57.520	ENSHGLG00100011957	SHQ1	67	53.811	Heterocephalus_glaber_male
ENSAMXG00000043822	shq1	75	62.704	ENSHCOG00000010799	shq1	72	62.736	Hippocampus_comes
ENSAMXG00000043822	shq1	92	68.431	ENSIPUG00000001247	shq1	74	78.169	Ictalurus_punctatus
ENSAMXG00000043822	shq1	74	55.378	ENSSTOG00000010043	SHQ1	79	54.734	Ictidomys_tridecemlineatus
ENSAMXG00000043822	shq1	71	56.010	ENSJJAG00000017611	Shq1	76	55.093	Jaculus_jaculus
ENSAMXG00000043822	shq1	75	57.753	ENSLACG00000014243	SHQ1	65	57.541	Latimeria_chalumnae
ENSAMXG00000043822	shq1	77	60.802	ENSLOCG00000009970	shq1	75	60.739	Lepisosteus_oculatus
ENSAMXG00000043822	shq1	71	55.797	ENSMFAG00000039148	SHQ1	74	55.220	Macaca_fascicularis
ENSAMXG00000043822	shq1	71	36.585	ENSMFAG00000037396	-	72	36.879	Macaca_fascicularis
ENSAMXG00000043822	shq1	62	52.459	ENSMMUG00000009571	SHQ1	69	52.219	Macaca_mulatta
ENSAMXG00000043822	shq1	71	36.562	ENSMMUG00000021761	-	72	36.879	Macaca_mulatta
ENSAMXG00000043822	shq1	71	55.797	ENSMNEG00000032667	SHQ1	74	55.220	Macaca_nemestrina
ENSAMXG00000043822	shq1	71	55.556	ENSMLEG00000038493	SHQ1	74	54.524	Mandrillus_leucophaeus
ENSAMXG00000043822	shq1	98	52.090	ENSMAMG00000023432	shq1	74	60.294	Mastacembelus_armatus
ENSAMXG00000043822	shq1	98	54.801	ENSMZEG00005008649	shq1	71	64.169	Maylandia_zebra
ENSAMXG00000043822	shq1	74	56.293	ENSMGAG00000009640	SHQ1	71	55.991	Meleagris_gallopavo
ENSAMXG00000043822	shq1	75	54.875	ENSMAUG00000022030	Shq1	76	54.734	Mesocricetus_auratus
ENSAMXG00000043822	shq1	93	49.265	ENSMICG00000009224	SHQ1	74	54.965	Microcebus_murinus
ENSAMXG00000043822	shq1	74	56.881	ENSMOCG00000017836	Shq1	76	55.787	Microtus_ochrogaster
ENSAMXG00000043822	shq1	75	63.869	ENSMMOG00000010569	shq1	72	64.387	Mola_mola
ENSAMXG00000043822	shq1	74	54.005	ENSMODG00000003926	SHQ1	78	53.349	Monodelphis_domestica
ENSAMXG00000043822	shq1	97	54.013	ENSMALG00000008870	shq1	71	65.421	Monopterus_albus
ENSAMXG00000043822	shq1	74	55.505	MGP_CAROLIEiJ_G0028689	Shq1	76	54.861	Mus_caroli
ENSAMXG00000043822	shq1	86	50.595	ENSMUSG00000035378	Shq1	76	55.093	Mus_musculus
ENSAMXG00000043822	shq1	78	55.142	MGP_PahariEiJ_G0022440	Shq1	76	55.889	Mus_pahari
ENSAMXG00000043822	shq1	82	53.556	MGP_SPRETEiJ_G0029717	Shq1	76	55.093	Mus_spretus
ENSAMXG00000043822	shq1	78	54.386	ENSMPUG00000017006	SHQ1	73	54.630	Mustela_putorius_furo
ENSAMXG00000043822	shq1	73	49.769	ENSMLUG00000013539	SHQ1	78	49.398	Myotis_lucifugus
ENSAMXG00000043822	shq1	82	49.787	ENSNGAG00000023317	Shq1	75	51.064	Nannospalax_galili
ENSAMXG00000043822	shq1	90	50.278	ENSNLEG00000002731	SHQ1	74	55.220	Nomascus_leucogenys
ENSAMXG00000043822	shq1	58	43.363	ENSMEUG00000009350	-	63	43.658	Notamacropus_eugenii
ENSAMXG00000043822	shq1	91	47.664	ENSODEG00000009192	SHQ1	79	53.364	Octodon_degus
ENSAMXG00000043822	shq1	75	64.908	ENSONIG00000020264	shq1	71	64.637	Oreochromis_niloticus
ENSAMXG00000043822	shq1	92	48.346	ENSOCUG00000016695	SHQ1	74	54.965	Oryctolagus_cuniculus
ENSAMXG00000043822	shq1	74	63.059	ENSORLG00000023538	shq1	77	62.353	Oryzias_latipes
ENSAMXG00000043822	shq1	74	64.554	ENSORLG00020003697	shq1	77	64.554	Oryzias_latipes_hni
ENSAMXG00000043822	shq1	74	64.319	ENSORLG00015021040	shq1	77	64.319	Oryzias_latipes_hsok
ENSAMXG00000043822	shq1	74	63.466	ENSOMEG00000001225	shq1	77	62.353	Oryzias_melastigma
ENSAMXG00000043822	shq1	92	48.614	ENSOGAG00000003898	SHQ1	76	53.563	Otolemur_garnettii
ENSAMXG00000043822	shq1	75	55.056	ENSOARG00000009547	SHQ1	75	55.149	Ovis_aries
ENSAMXG00000043822	shq1	90	50.093	ENSPPAG00000027714	SHQ1	74	55.452	Pan_paniscus
ENSAMXG00000043822	shq1	90	36.762	ENSPPAG00000043263	-	72	39.110	Pan_paniscus
ENSAMXG00000043822	shq1	92	50.370	ENSPPRG00000004769	SHQ1	75	54.861	Panthera_pardus
ENSAMXG00000043822	shq1	92	48.127	ENSPTIG00000011478	SHQ1	74	52.927	Panthera_tigris_altaica
ENSAMXG00000043822	shq1	90	50.093	ENSPTRG00000015106	SHQ1	74	55.452	Pan_troglodytes
ENSAMXG00000043822	shq1	90	36.762	ENSPTRG00000048303	-	72	38.407	Pan_troglodytes
ENSAMXG00000043822	shq1	71	55.314	ENSPANG00000002881	SHQ1	74	55.220	Papio_anubis
ENSAMXG00000043822	shq1	90	58.022	ENSPKIG00000021517	shq1	74	66.508	Paramormyrops_kingsleyae
ENSAMXG00000043822	shq1	75	55.909	ENSPSIG00000005536	SHQ1	71	55.787	Pelodiscus_sinensis
ENSAMXG00000043822	shq1	74	60.839	ENSPMGG00000008838	shq1	72	60.471	Periophthalmus_magnuspinnatus
ENSAMXG00000043822	shq1	65	58.575	ENSPEMG00000000251	Shq1	76	55.324	Peromyscus_maniculatus_bairdii
ENSAMXG00000043822	shq1	74	55.378	ENSPMAG00000005372	shq1	97	54.273	Petromyzon_marinus
ENSAMXG00000043822	shq1	75	61.521	ENSPFOG00000003118	shq1	79	61.072	Poecilia_formosa
ENSAMXG00000043822	shq1	59	57.726	ENSPMEG00000011076	shq1	75	56.805	Poecilia_mexicana
ENSAMXG00000043822	shq1	66	57.784	ENSPREG00000000591	shq1	73	56.992	Poecilia_reticulata
ENSAMXG00000043822	shq1	90	50.093	ENSPPYG00000013717	SHQ1	74	55.452	Pongo_abelii
ENSAMXG00000043822	shq1	71	57.279	ENSPCAG00000009035	SHQ1	75	56.120	Procavia_capensis
ENSAMXG00000043822	shq1	71	55.981	ENSPCOG00000008415	SHQ1	74	55.862	Propithecus_coquereli
ENSAMXG00000043822	shq1	84	52.738	ENSPVAG00000017392	SHQ1	75	53.935	Pteropus_vampyrus
ENSAMXG00000043822	shq1	98	54.785	ENSPNYG00000003878	shq1	71	64.169	Pundamilia_nyererei
ENSAMXG00000043822	shq1	88	72.233	ENSPNAG00000026840	shq1	88	69.331	Pygocentrus_nattereri
ENSAMXG00000043822	shq1	76	54.853	ENSRNOG00000005433	Shq1	71	55.093	Rattus_norvegicus
ENSAMXG00000043822	shq1	90	48.023	ENSRBIG00000026280	SHQ1	74	53.191	Rhinopithecus_bieti
ENSAMXG00000043822	shq1	90	49.907	ENSRROG00000034126	SHQ1	75	54.988	Rhinopithecus_roxellana
ENSAMXG00000043822	shq1	71	48.309	ENSSBOG00000021038	SHQ1	73	48.148	Saimiri_boliviensis_boliviensis
ENSAMXG00000043822	shq1	75	55.909	ENSSHAG00000015077	SHQ1	77	55.991	Sarcophilus_harrisii
ENSAMXG00000043822	shq1	75	65.501	ENSSFOG00015016241	shq1	77	65.330	Scleropages_formosus
ENSAMXG00000043822	shq1	91	54.181	ENSSMAG00000016151	shq1	70	64.871	Scophthalmus_maximus
ENSAMXG00000043822	shq1	98	54.797	ENSSDUG00000011986	shq1	70	67.213	Seriola_dumerili
ENSAMXG00000043822	shq1	98	55.008	ENSSLDG00000013908	shq1	76	63.853	Seriola_lalandi_dorsalis
ENSAMXG00000043822	shq1	59	56.598	ENSSARG00000007119	SHQ1	60	56.598	Sorex_araneus
ENSAMXG00000043822	shq1	59	50.142	ENSSPUG00000011526	-	64	49.711	Sphenodon_punctatus
ENSAMXG00000043822	shq1	71	57.108	ENSSSCG00000011518	SHQ1	74	56.250	Sus_scrofa
ENSAMXG00000043822	shq1	71	56.265	ENSTGUG00000009933	SHQ1	75	55.479	Taeniopygia_guttata
ENSAMXG00000043822	shq1	71	59.756	ENSTRUG00000009446	shq1	73	59.859	Takifugu_rubripes
ENSAMXG00000043822	shq1	62	66.292	ENSTNIG00000007354	shq1	94	59.441	Tetraodon_nigroviridis
ENSAMXG00000043822	shq1	76	55.856	ENSTTRG00000005320	SHQ1	75	55.556	Tursiops_truncatus
ENSAMXG00000043822	shq1	92	50.094	ENSUMAG00000024031	SHQ1	74	55.319	Ursus_maritimus
ENSAMXG00000043822	shq1	65	56.201	ENSVVUG00000013906	SHQ1	74	54.398	Vulpes_vulpes
ENSAMXG00000043822	shq1	75	55.196	ENSXETG00000032215	shq1	70	55.269	Xenopus_tropicalis