EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000043839 (Gene tree)
Gene ID: 103026036
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6243 bases
Position: chr6:4291992-4298234
Accession: 103026036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042490	Mitoc_L55	PF09776.9	2.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043997	-	4144	XM_007235284	ENSAMXP00000042490	131 (aa)	XP_007235346	UPI000440F586

Gene Model

Click here to download ENSAMXG00000043839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043839	zgc:171480	80	63.810	ENSAPOG00000002881	zgc:171480	73	63.810	Acanthochromis_polyacanthus
ENSAMXG00000043839	zgc:171480	99	54.198	ENSACIG00000001646	zgc:171480	96	54.198	Amphilophus_citrinellus
ENSAMXG00000043839	zgc:171480	80	65.714	ENSAOCG00000016155	zgc:171480	73	65.714	Amphiprion_ocellaris
ENSAMXG00000043839	zgc:171480	80	65.714	ENSAPEG00000022327	zgc:171480	73	65.714	Amphiprion_percula
ENSAMXG00000043839	zgc:171480	80	62.857	ENSATEG00000005625	zgc:171480	71	62.857	Anabas_testudineus
ENSAMXG00000043839	zgc:171480	76	62.000	ENSACAG00000006897	-	93	56.780	Anolis_carolinensis
ENSAMXG00000043839	zgc:171480	78	64.706	ENSACLG00000005172	zgc:171480	74	64.706	Astatotilapia_calliptera
ENSAMXG00000043839	zgc:171480	88	57.391	ENSCPBG00000001771	-	92	57.391	Chrysemys_picta_bellii
ENSAMXG00000043839	zgc:171480	89	59.483	ENSCSEG00000019533	zgc:171480	82	59.483	Cynoglossus_semilaevis
ENSAMXG00000043839	zgc:171480	99	68.462	ENSDARG00000043402	zgc:171480	98	68.462	Danio_rerio
ENSAMXG00000043839	zgc:171480	99	66.412	ENSELUG00000007716	zgc:171480	100	66.412	Esox_lucius
ENSAMXG00000043839	zgc:171480	71	56.989	ENSFALG00000001083	-	96	56.989	Ficedula_albicollis
ENSAMXG00000043839	zgc:171480	82	58.333	ENSFHEG00000000203	zgc:171480	76	59.434	Fundulus_heteroclitus
ENSAMXG00000043839	zgc:171480	76	69.697	ENSGMOG00000019009	zgc:171480	97	69.697	Gadus_morhua
ENSAMXG00000043839	zgc:171480	92	50.000	ENSGALG00000038820	-	99	50.000	Gallus_gallus
ENSAMXG00000043839	zgc:171480	92	56.098	ENSGAFG00000004832	-	85	56.098	Gambusia_affinis
ENSAMXG00000043839	zgc:171480	69	73.626	ENSGACG00000002136	zgc:171480	99	73.626	Gasterosteus_aculeatus
ENSAMXG00000043839	zgc:171480	87	58.772	ENSGAGG00000001806	-	92	58.772	Gopherus_agassizii
ENSAMXG00000043839	zgc:171480	78	64.706	ENSHBUG00000007895	zgc:171480	74	64.706	Haplochromis_burtoni
ENSAMXG00000043839	zgc:171480	79	63.462	ENSHCOG00000003526	zgc:171480	57	63.462	Hippocampus_comes
ENSAMXG00000043839	zgc:171480	100	71.212	ENSIPUG00000001273	mrpl55	100	71.212	Ictalurus_punctatus
ENSAMXG00000043839	zgc:171480	78	68.627	ENSKMAG00000002011	zgc:171480	80	68.627	Kryptolebias_marmoratus
ENSAMXG00000043839	zgc:171480	84	61.818	ENSLBEG00000010915	zgc:171480	88	61.261	Labrus_bergylta
ENSAMXG00000043839	zgc:171480	84	61.818	ENSLBEG00000016107	-	88	61.261	Labrus_bergylta
ENSAMXG00000043839	zgc:171480	89	65.254	ENSLACG00000016281	zgc:171480	89	65.254	Latimeria_chalumnae
ENSAMXG00000043839	zgc:171480	80	62.857	ENSMAMG00000022250	zgc:171480	71	62.857	Mastacembelus_armatus
ENSAMXG00000043839	zgc:171480	78	64.706	ENSMZEG00005015585	zgc:171480	74	64.706	Maylandia_zebra
ENSAMXG00000043839	zgc:171480	92	51.667	ENSMGAG00000002612	-	99	51.667	Meleagris_gallopavo
ENSAMXG00000043839	zgc:171480	87	48.246	ENSMMOG00000008740	-	87	45.614	Mola_mola
ENSAMXG00000043839	zgc:171480	86	61.062	ENSMALG00000019823	zgc:171480	90	61.062	Monopterus_albus
ENSAMXG00000043839	zgc:171480	74	66.000	ENSNBRG00000019447	zgc:171480	74	63.725	Neolamprologus_brichardi
ENSAMXG00000043839	zgc:171480	78	63.725	ENSONIG00000007645	zgc:171480	76	63.725	Oreochromis_niloticus
ENSAMXG00000043839	zgc:171480	92	52.033	ENSORLG00020006963	zgc:171480	91	50.820	Oryzias_latipes_hni
ENSAMXG00000043839	zgc:171480	76	59.596	ENSORLG00015003266	zgc:171480	74	59.596	Oryzias_latipes_hsok
ENSAMXG00000043839	zgc:171480	79	61.538	ENSOMEG00000008184	zgc:171480	76	61.538	Oryzias_melastigma
ENSAMXG00000043839	zgc:171480	99	61.069	ENSPKIG00000006753	zgc:171480	100	60.305	Paramormyrops_kingsleyae
ENSAMXG00000043839	zgc:171480	87	55.263	ENSPSIG00000010893	-	91	55.263	Pelodiscus_sinensis
ENSAMXG00000043839	zgc:171480	92	53.719	ENSPMGG00000012657	-	89	53.719	Periophthalmus_magnuspinnatus
ENSAMXG00000043839	zgc:171480	69	52.688	ENSPMAG00000000867	zgc:171480	93	44.954	Petromyzon_marinus
ENSAMXG00000043839	zgc:171480	88	50.000	ENSPCIG00000021848	-	92	50.000	Phascolarctos_cinereus
ENSAMXG00000043839	zgc:171480	79	60.577	ENSPFOG00000012703	zgc:171480	74	60.577	Poecilia_formosa
ENSAMXG00000043839	zgc:171480	90	56.667	ENSPREG00000020328	zgc:171480	86	56.667	Poecilia_reticulata
ENSAMXG00000043839	zgc:171480	100	78.030	ENSPNAG00000017309	zgc:171480	100	75.000	Pygocentrus_nattereri
ENSAMXG00000043839	zgc:171480	99	64.122	ENSSFOG00015015668	mrpl55	100	64.122	Scleropages_formosus
ENSAMXG00000043839	zgc:171480	78	65.686	ENSSMAG00000005429	zgc:171480	73	65.686	Scophthalmus_maximus
ENSAMXG00000043839	zgc:171480	99	53.571	ENSSDUG00000022556	zgc:171480	94	51.799	Seriola_dumerili
ENSAMXG00000043839	zgc:171480	99	52.857	ENSSLDG00000019598	zgc:171480	94	51.079	Seriola_lalandi_dorsalis
ENSAMXG00000043839	zgc:171480	82	58.879	ENSSPUG00000000735	-	86	58.879	Sphenodon_punctatus
ENSAMXG00000043839	zgc:171480	96	54.745	ENSSPAG00000011598	zgc:171480	96	54.745	Stegastes_partitus
ENSAMXG00000043839	zgc:171480	75	64.286	ENSTRUG00000003082	zgc:171480	69	64.286	Takifugu_rubripes
ENSAMXG00000043839	zgc:171480	69	64.835	ENSXCOG00000005887	zgc:171480	75	64.835	Xiphophorus_couchianus
ENSAMXG00000043839	zgc:171480	79	59.615	ENSXMAG00000007937	zgc:171480	74	59.615	Xiphophorus_maculatus