EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000043892 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2901 bases
Position: chr5:19359511-19362411
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000047388	RVT_1	PF00078.27	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039359	-	2901	-	ENSAMXP00000047388	792 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000043892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000043892	-	81	39.869	ENSAMXG00000039114	-	66	37.462
ENSAMXG00000043892	-	96	40.263	ENSAMXG00000038169	-	57	39.920
ENSAMXG00000043892	-	84	36.043	ENSAMXG00000043385	-	50	36.164
ENSAMXG00000043892	-	83	36.496	ENSAMXG00000042521	-	50	36.496
ENSAMXG00000043892	-	93	37.533	ENSAMXG00000034382	-	64	37.940
ENSAMXG00000043892	-	87	39.264	ENSAMXG00000032559	-	62	39.441
ENSAMXG00000043892	-	65	35.640	ENSAMXG00000037157	-	58	36.042
ENSAMXG00000043892	-	82	34.756	ENSAMXG00000030022	-	53	35.238
ENSAMXG00000043892	-	74	35.135	ENSAMXG00000036113	-	55	35.656
ENSAMXG00000043892	-	67	37.805	ENSAMXG00000038033	-	56	37.423
ENSAMXG00000043892	-	50	37.017	ENSAMXG00000041896	-	57	37.870
ENSAMXG00000043892	-	59	37.143	ENSAMXG00000041114	-	51	37.278
ENSAMXG00000043892	-	74	37.175	ENSAMXG00000041369	-	50	37.175
ENSAMXG00000043892	-	58	48.676	ENSAMXG00000040471	-	74	48.871
ENSAMXG00000043892	-	74	37.313	ENSAMXG00000031305	-	58	37.786
ENSAMXG00000043892	-	96	60.677	ENSAMXG00000030902	-	52	60.447
ENSAMXG00000043892	-	70	38.095	ENSAMXG00000038310	-	58	39.241
ENSAMXG00000043892	-	96	72.105	ENSAMXG00000038578	-	56	71.921
ENSAMXG00000043892	-	83	34.793	ENSAMXG00000037864	-	52	38.024
ENSAMXG00000043892	-	57	36.464	ENSAMXG00000033197	-	63	37.278
ENSAMXG00000043892	-	81	37.288	ENSAMXG00000033912	-	53	38.012
ENSAMXG00000043892	-	65	40.000	ENSAMXG00000035923	-	65	41.071
ENSAMXG00000043892	-	55	34.146	ENSAMXG00000033786	-	65	34.694
ENSAMXG00000043892	-	84	35.759	ENSAMXG00000040885	-	51	35.806
ENSAMXG00000043892	-	68	44.388	ENSAMXG00000037673	-	64	43.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043892	-	94	41.444	ENSAPOG00000008045	-	75	41.342	Acanthochromis_polyacanthus
ENSAMXG00000043892	-	93	42.105	ENSAPOG00000012135	-	63	42.105	Acanthochromis_polyacanthus
ENSAMXG00000043892	-	84	38.393	ENSACLG00000010042	-	52	38.095	Astatotilapia_calliptera
ENSAMXG00000043892	-	87	39.710	ENSACLG00000000367	-	74	39.275	Astatotilapia_calliptera
ENSAMXG00000043892	-	95	39.394	ENSACLG00000014619	-	50	39.153	Astatotilapia_calliptera
ENSAMXG00000043892	-	91	39.554	ENSACLG00000004062	-	93	39.276	Astatotilapia_calliptera
ENSAMXG00000043892	-	96	60.367	ENSACLG00000018181	-	79	59.921	Astatotilapia_calliptera
ENSAMXG00000043892	-	85	41.581	ENSACLG00000007343	-	81	41.471	Astatotilapia_calliptera
ENSAMXG00000043892	-	76	39.868	ENSACLG00000014439	-	99	39.209	Astatotilapia_calliptera
ENSAMXG00000043892	-	82	39.389	ENSACLG00000008862	-	86	39.084	Astatotilapia_calliptera
ENSAMXG00000043892	-	95	38.999	ENSACLG00000027730	-	66	39.021	Astatotilapia_calliptera
ENSAMXG00000043892	-	64	39.216	ENSACLG00000005569	-	100	39.020	Astatotilapia_calliptera
ENSAMXG00000043892	-	83	42.836	ENSACLG00000001563	-	64	42.900	Astatotilapia_calliptera
ENSAMXG00000043892	-	70	35.189	ENSCPBG00000003152	-	94	35.262	Chrysemys_picta_bellii
ENSAMXG00000043892	-	94	37.166	ENSCPBG00000011626	-	86	36.828	Chrysemys_picta_bellii
ENSAMXG00000043892	-	56	34.014	ENSCPBG00000002218	-	100	33.560	Chrysemys_picta_bellii
ENSAMXG00000043892	-	74	36.610	ENSCPBG00000024252	-	100	36.271	Chrysemys_picta_bellii
ENSAMXG00000043892	-	81	35.759	ENSCPBG00000008522	-	100	35.449	Chrysemys_picta_bellii
ENSAMXG00000043892	-	70	36.007	ENSCPBG00000001477	-	100	35.651	Chrysemys_picta_bellii
ENSAMXG00000043892	-	86	56.977	ENSCVAG00000009912	-	83	56.618	Cyprinodon_variegatus
ENSAMXG00000043892	-	96	61.868	ENSELUG00000000948	-	64	62.155	Esox_lucius
ENSAMXG00000043892	-	57	40.044	ENSGAFG00000012710	-	99	40.044	Gambusia_affinis
ENSAMXG00000043892	-	80	40.532	ENSGAFG00000009062	-	81	40.472	Gambusia_affinis
ENSAMXG00000043892	-	89	38.244	ENSGAGG00000020521	-	82	37.857	Gopherus_agassizii
ENSAMXG00000043892	-	94	38.658	ENSGAGG00000025282	-	62	38.389	Gopherus_agassizii
ENSAMXG00000043892	-	94	40.134	ENSGAGG00000014450	-	65	39.892	Gopherus_agassizii
ENSAMXG00000043892	-	70	37.004	ENSGAGG00000014538	-	99	36.643	Gopherus_agassizii
ENSAMXG00000043892	-	89	38.244	ENSGAGG00000012039	-	82	37.857	Gopherus_agassizii
ENSAMXG00000043892	-	92	39.592	ENSIPUG00000000601	-	77	39.617	Ictalurus_punctatus
ENSAMXG00000043892	-	96	60.340	ENSMAMG00000018393	-	70	60.343	Mastacembelus_armatus
ENSAMXG00000043892	-	96	60.184	ENSMZEG00005000633	-	70	60.000	Maylandia_zebra
ENSAMXG00000043892	-	80	39.688	ENSMALG00000019305	-	93	39.688	Monopterus_albus
ENSAMXG00000043892	-	94	42.667	ENSORLG00000022369	-	52	42.895	Oryzias_latipes
ENSAMXG00000043892	-	94	59.463	ENSORLG00000028632	-	71	58.816	Oryzias_latipes
ENSAMXG00000043892	-	81	41.395	ENSORLG00000025478	-	80	40.845	Oryzias_latipes
ENSAMXG00000043892	-	76	42.244	ENSORLG00000029791	-	83	42.079	Oryzias_latipes
ENSAMXG00000043892	-	96	61.198	ENSORLG00000026676	-	78	61.265	Oryzias_latipes
ENSAMXG00000043892	-	82	43.578	ENSORLG00020002554	-	99	42.813	Oryzias_latipes_hni
ENSAMXG00000043892	-	96	62.696	ENSOMEG00000009987	-	50	62.599	Oryzias_melastigma
ENSAMXG00000043892	-	87	50.796	ENSOMEG00000006705	-	93	50.435	Oryzias_melastigma
ENSAMXG00000043892	-	86	52.647	ENSPKIG00000000391	-	99	52.647	Paramormyrops_kingsleyae
ENSAMXG00000043892	-	90	37.447	ENSPSIG00000001658	-	78	37.907	Pelodiscus_sinensis
ENSAMXG00000043892	-	95	37.517	ENSPSIG00000000353	-	63	37.517	Pelodiscus_sinensis
ENSAMXG00000043892	-	82	39.177	ENSPSIG00000013781	-	83	38.872	Pelodiscus_sinensis
ENSAMXG00000043892	-	96	37.500	ENSPSIG00000000489	-	50	37.731	Pelodiscus_sinensis
ENSAMXG00000043892	-	94	40.295	ENSPSIG00000000994	-	52	40.108	Pelodiscus_sinensis
ENSAMXG00000043892	-	94	38.431	ENSPSIG00000000767	-	52	37.936	Pelodiscus_sinensis
ENSAMXG00000043892	-	79	51.118	ENSPMEG00000020606	-	99	51.515	Poecilia_mexicana
ENSAMXG00000043892	-	93	39.866	ENSPMEG00000016355	-	59	40.000	Poecilia_mexicana
ENSAMXG00000043892	-	84	40.713	ENSPMEG00000019585	-	82	40.118	Poecilia_mexicana
ENSAMXG00000043892	-	95	57.106	ENSPREG00000004954	-	50	57.143	Poecilia_reticulata
ENSAMXG00000043892	-	93	39.329	ENSSDUG00000002460	-	58	39.195	Seriola_dumerili
ENSAMXG00000043892	-	73	53.990	ENSTNIG00000001462	-	100	53.820	Tetraodon_nigroviridis
ENSAMXG00000043892	-	93	41.970	ENSXMAG00000030100	-	52	41.914	Xiphophorus_maculatus
ENSAMXG00000043892	-	64	41.107	ENSXMAG00000025770	-	100	40.514	Xiphophorus_maculatus
ENSAMXG00000043892	-	96	53.236	ENSXMAG00000030089	-	71	53.183	Xiphophorus_maculatus