EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000043978 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1191 bases
Position: chrAPWO02001626.1:135843-137033
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	1	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	2	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	3	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	4	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	5	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	6	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	7	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	8	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	9	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	10	11
ENSAMXP00000032976	zf-C2H2	PF00096.26	1.3e-63	11	11
ENSAMXP00000032976	zf-met	PF12874.7	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054352	-	1191	-	ENSAMXP00000032976	396 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000043978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000043978	-	87	55.310	ENSAMXG00000043302	-	72	55.310
ENSAMXG00000043978	-	87	59.940	ENSAMXG00000035437	-	99	59.940
ENSAMXG00000043978	-	90	58.044	ENSAMXG00000031844	-	96	58.044
ENSAMXG00000043978	-	92	59.273	ENSAMXG00000003002	-	96	59.273
ENSAMXG00000043978	-	85	66.667	ENSAMXG00000025455	-	99	66.667
ENSAMXG00000043978	-	95	60.481	ENSAMXG00000042593	-	98	60.000
ENSAMXG00000043978	-	85	37.647	ENSAMXG00000024907	znf319b	89	37.647
ENSAMXG00000043978	-	84	43.846	ENSAMXG00000037382	-	93	40.152
ENSAMXG00000043978	-	89	62.037	ENSAMXG00000025452	-	99	62.037
ENSAMXG00000043978	-	95	59.136	ENSAMXG00000026144	-	97	59.136
ENSAMXG00000043978	-	88	59.659	ENSAMXG00000026142	-	88	59.659
ENSAMXG00000043978	-	91	36.154	ENSAMXG00000035525	znf646	99	36.154
ENSAMXG00000043978	-	88	33.514	ENSAMXG00000002273	patz1	62	33.514
ENSAMXG00000043978	-	89	58.309	ENSAMXG00000010805	-	99	58.309
ENSAMXG00000043978	-	87	41.204	ENSAMXG00000042191	zbtb47a	69	41.204
ENSAMXG00000043978	-	87	58.242	ENSAMXG00000029518	-	57	70.968
ENSAMXG00000043978	-	99	51.716	ENSAMXG00000038536	-	96	51.716
ENSAMXG00000043978	-	85	64.497	ENSAMXG00000035809	-	99	64.497
ENSAMXG00000043978	-	88	61.250	ENSAMXG00000044107	-	88	52.381
ENSAMXG00000043978	-	89	58.876	ENSAMXG00000039016	-	85	58.876
ENSAMXG00000043978	-	87	64.516	ENSAMXG00000024978	-	96	64.516
ENSAMXG00000043978	-	87	59.659	ENSAMXG00000039977	-	93	59.659
ENSAMXG00000043978	-	87	62.997	ENSAMXG00000009776	-	96	62.997
ENSAMXG00000043978	-	87	61.832	ENSAMXG00000039432	-	95	61.818
ENSAMXG00000043978	-	88	55.556	ENSAMXG00000034344	-	77	55.556
ENSAMXG00000043978	-	86	62.245	ENSAMXG00000035690	-	73	62.245
ENSAMXG00000043978	-	81	38.281	ENSAMXG00000038085	scrt1a	58	38.281
ENSAMXG00000043978	-	87	57.895	ENSAMXG00000036849	-	86	57.895
ENSAMXG00000043978	-	86	57.477	ENSAMXG00000039700	-	89	57.477
ENSAMXG00000043978	-	86	62.898	ENSAMXG00000041725	-	89	62.898
ENSAMXG00000043978	-	91	52.652	ENSAMXG00000043541	-	89	53.909
ENSAMXG00000043978	-	86	64.923	ENSAMXG00000032457	-	91	64.923
ENSAMXG00000043978	-	90	59.259	ENSAMXG00000042167	-	88	59.259
ENSAMXG00000043978	-	83	38.235	ENSAMXG00000029059	-	67	38.235
ENSAMXG00000043978	-	92	55.426	ENSAMXG00000012873	-	95	55.344
ENSAMXG00000043978	-	88	58.974	ENSAMXG00000019489	-	86	58.974
ENSAMXG00000043978	-	87	55.556	ENSAMXG00000042784	-	94	55.556
ENSAMXG00000043978	-	85	63.314	ENSAMXG00000031900	-	88	63.314
ENSAMXG00000043978	-	85	56.213	ENSAMXG00000039770	-	85	56.213
ENSAMXG00000043978	-	92	30.068	ENSAMXG00000001155	si:dkey-89b17.4	82	30.068
ENSAMXG00000043978	-	88	54.918	ENSAMXG00000030530	-	98	56.704
ENSAMXG00000043978	-	87	59.816	ENSAMXG00000032619	-	97	59.816
ENSAMXG00000043978	-	94	58.621	ENSAMXG00000043019	-	98	58.621
ENSAMXG00000043978	-	90	56.429	ENSAMXG00000037143	-	94	54.783
ENSAMXG00000043978	-	97	58.280	ENSAMXG00000040677	-	97	58.280
ENSAMXG00000043978	-	88	60.571	ENSAMXG00000029828	-	98	60.571
ENSAMXG00000043978	-	88	56.835	ENSAMXG00000017959	-	94	56.835
ENSAMXG00000043978	-	87	63.905	ENSAMXG00000041128	-	89	63.905
ENSAMXG00000043978	-	89	63.514	ENSAMXG00000009558	-	95	63.514
ENSAMXG00000043978	-	88	57.937	ENSAMXG00000036257	-	92	57.937
ENSAMXG00000043978	-	87	61.006	ENSAMXG00000031489	-	92	61.538
ENSAMXG00000043978	-	87	64.223	ENSAMXG00000037885	-	97	64.223
ENSAMXG00000043978	-	87	65.823	ENSAMXG00000029178	-	99	65.823
ENSAMXG00000043978	-	89	46.914	ENSAMXG00000012589	-	89	46.914
ENSAMXG00000043978	-	84	58.115	ENSAMXG00000041650	-	86	58.115
ENSAMXG00000043978	-	87	61.027	ENSAMXG00000039004	-	89	61.027
ENSAMXG00000043978	-	87	63.690	ENSAMXG00000007092	-	99	63.690
ENSAMXG00000043978	-	86	64.952	ENSAMXG00000000353	-	95	64.952
ENSAMXG00000043978	-	89	60.104	ENSAMXG00000035683	-	91	60.104
ENSAMXG00000043978	-	88	52.564	ENSAMXG00000034333	-	84	52.632
ENSAMXG00000043978	-	83	60.671	ENSAMXG00000038636	-	95	60.671
ENSAMXG00000043978	-	87	46.154	ENSAMXG00000041862	-	96	46.154
ENSAMXG00000043978	-	87	36.957	ENSAMXG00000041864	prdm5	92	36.957
ENSAMXG00000043978	-	94	56.897	ENSAMXG00000030659	-	88	56.897
ENSAMXG00000043978	-	88	62.882	ENSAMXG00000004610	-	97	62.882
ENSAMXG00000043978	-	88	63.905	ENSAMXG00000031009	-	88	63.905
ENSAMXG00000043978	-	86	62.937	ENSAMXG00000035145	-	67	62.937
ENSAMXG00000043978	-	86	35.955	ENSAMXG00000039622	zbtb41	53	35.955
ENSAMXG00000043978	-	87	64.223	ENSAMXG00000036762	-	97	64.223
ENSAMXG00000043978	-	87	61.667	ENSAMXG00000041609	-	89	61.667
ENSAMXG00000043978	-	88	57.191	ENSAMXG00000042174	-	91	57.191
ENSAMXG00000043978	-	88	62.667	ENSAMXG00000041975	-	81	62.667
ENSAMXG00000043978	-	87	61.850	ENSAMXG00000039162	-	96	61.850
ENSAMXG00000043978	-	95	61.093	ENSAMXG00000010930	-	85	61.093
ENSAMXG00000043978	-	81	57.292	ENSAMXG00000030963	-	73	57.292
ENSAMXG00000043978	-	86	65.538	ENSAMXG00000039744	-	99	65.538
ENSAMXG00000043978	-	96	55.556	ENSAMXG00000032237	-	96	55.556
ENSAMXG00000043978	-	84	43.421	ENSAMXG00000006669	GFI1	66	43.421
ENSAMXG00000043978	-	85	53.165	ENSAMXG00000038122	-	95	53.165
ENSAMXG00000043978	-	92	46.500	ENSAMXG00000007973	-	95	48.921
ENSAMXG00000043978	-	86	63.462	ENSAMXG00000030911	-	65	63.462
ENSAMXG00000043978	-	88	58.730	ENSAMXG00000037981	-	75	58.730
ENSAMXG00000043978	-	92	50.000	ENSAMXG00000026143	-	97	51.775
ENSAMXG00000043978	-	98	57.909	ENSAMXG00000010078	-	93	60.355
ENSAMXG00000043978	-	87	60.000	ENSAMXG00000029161	-	80	60.000
ENSAMXG00000043978	-	87	65.089	ENSAMXG00000025965	-	95	65.089
ENSAMXG00000043978	-	86	43.056	ENSAMXG00000034873	-	80	43.056
ENSAMXG00000043978	-	88	64.286	ENSAMXG00000042774	-	96	64.286
ENSAMXG00000043978	-	89	60.741	ENSAMXG00000036233	-	91	60.741
ENSAMXG00000043978	-	87	61.212	ENSAMXG00000038453	-	83	61.212
ENSAMXG00000043978	-	86	62.642	ENSAMXG00000035949	-	79	62.642
ENSAMXG00000043978	-	88	63.253	ENSAMXG00000029109	-	87	58.696
ENSAMXG00000043978	-	85	44.595	ENSAMXG00000034934	-	79	44.595
ENSAMXG00000043978	-	85	56.463	ENSAMXG00000036241	-	89	57.143
ENSAMXG00000043978	-	89	57.988	ENSAMXG00000036915	-	94	57.988
ENSAMXG00000043978	-	91	57.988	ENSAMXG00000037923	-	99	58.769
ENSAMXG00000043978	-	88	61.145	ENSAMXG00000037760	-	95	61.145
ENSAMXG00000043978	-	90	59.688	ENSAMXG00000039752	-	89	59.688
ENSAMXG00000043978	-	88	50.510	ENSAMXG00000043178	-	79	50.510
ENSAMXG00000043978	-	85	63.415	ENSAMXG00000031496	-	87	63.415
ENSAMXG00000043978	-	86	61.017	ENSAMXG00000008613	-	96	61.017
ENSAMXG00000043978	-	88	60.894	ENSAMXG00000012604	-	97	60.894
ENSAMXG00000043978	-	85	65.138	ENSAMXG00000035920	-	86	65.138
ENSAMXG00000043978	-	88	55.162	ENSAMXG00000029960	-	95	55.162
ENSAMXG00000043978	-	88	57.225	ENSAMXG00000033201	-	94	57.225
ENSAMXG00000043978	-	92	50.424	ENSAMXG00000035349	-	52	50.424
ENSAMXG00000043978	-	85	64.242	ENSAMXG00000033500	-	93	64.242
ENSAMXG00000043978	-	89	60.059	ENSAMXG00000034847	-	91	60.059
ENSAMXG00000043978	-	87	59.877	ENSAMXG00000039408	-	91	59.877
ENSAMXG00000043978	-	86	64.045	ENSAMXG00000017609	-	77	65.161
ENSAMXG00000043978	-	88	57.000	ENSAMXG00000032841	-	91	57.000
ENSAMXG00000043978	-	88	56.884	ENSAMXG00000040806	-	91	56.884
ENSAMXG00000043978	-	87	45.312	ENSAMXG00000044096	-	80	45.312
ENSAMXG00000043978	-	85	64.430	ENSAMXG00000011804	-	86	64.430
ENSAMXG00000043978	-	82	57.475	ENSAMXG00000036633	-	62	57.516
ENSAMXG00000043978	-	86	60.882	ENSAMXG00000044110	-	95	60.882
ENSAMXG00000043978	-	88	65.882	ENSAMXG00000029878	-	96	65.882
ENSAMXG00000043978	-	87	47.343	ENSAMXG00000014745	-	82	47.887
ENSAMXG00000043978	-	86	64.327	ENSAMXG00000043251	-	95	64.327
ENSAMXG00000043978	-	89	48.718	ENSAMXG00000033252	-	97	47.849
ENSAMXG00000043978	-	86	64.241	ENSAMXG00000018161	-	95	64.241
ENSAMXG00000043978	-	87	62.857	ENSAMXG00000033124	-	56	62.857
ENSAMXG00000043978	-	86	62.757	ENSAMXG00000031501	-	88	62.757
ENSAMXG00000043978	-	87	55.725	ENSAMXG00000035286	si:ch1073-224n8.1	83	44.538
ENSAMXG00000043978	-	90	54.692	ENSAMXG00000032212	-	89	55.814
ENSAMXG00000043978	-	88	59.091	ENSAMXG00000033013	-	81	59.091
ENSAMXG00000043978	-	98	61.429	ENSAMXG00000042938	-	92	61.429
ENSAMXG00000043978	-	87	64.516	ENSAMXG00000040212	-	89	64.516
ENSAMXG00000043978	-	87	62.908	ENSAMXG00000036567	-	79	62.908
ENSAMXG00000043978	-	93	47.419	ENSAMXG00000035127	-	99	48.627
ENSAMXG00000043978	-	89	56.269	ENSAMXG00000037717	-	94	56.269
ENSAMXG00000043978	-	93	37.264	ENSAMXG00000044034	-	57	37.264
ENSAMXG00000043978	-	88	56.209	ENSAMXG00000031307	-	72	56.209
ENSAMXG00000043978	-	88	60.896	ENSAMXG00000001626	-	93	60.896
ENSAMXG00000043978	-	85	60.804	ENSAMXG00000035875	-	99	60.804
ENSAMXG00000043978	-	89	37.647	ENSAMXG00000025761	-	91	37.647
ENSAMXG00000043978	-	90	58.447	ENSAMXG00000013274	-	97	60.515
ENSAMXG00000043978	-	88	53.298	ENSAMXG00000009563	-	93	55.325
ENSAMXG00000043978	-	82	59.677	ENSAMXG00000041721	-	72	59.677
ENSAMXG00000043978	-	86	52.614	ENSAMXG00000038325	-	92	57.937
ENSAMXG00000043978	-	85	59.344	ENSAMXG00000038324	-	76	59.344
ENSAMXG00000043978	-	88	64.201	ENSAMXG00000039879	-	98	64.201
ENSAMXG00000043978	-	87	63.436	ENSAMXG00000031646	-	97	63.436
ENSAMXG00000043978	-	99	57.388	ENSAMXG00000038280	-	96	57.388
ENSAMXG00000043978	-	98	53.274	ENSAMXG00000038284	-	97	53.274
ENSAMXG00000043978	-	82	41.837	ENSAMXG00000015228	-	56	41.837
ENSAMXG00000043978	-	85	51.235	ENSAMXG00000034857	-	67	51.235
ENSAMXG00000043978	-	89	51.449	ENSAMXG00000013492	-	99	49.515
ENSAMXG00000043978	-	96	61.631	ENSAMXG00000034402	-	98	61.631
ENSAMXG00000043978	-	86	66.272	ENSAMXG00000041404	-	96	66.272
ENSAMXG00000043978	-	89	63.018	ENSAMXG00000034958	-	95	63.018
ENSAMXG00000043978	-	88	62.908	ENSAMXG00000041865	-	98	62.908
ENSAMXG00000043978	-	88	62.424	ENSAMXG00000031794	-	96	62.424
ENSAMXG00000043978	-	87	55.833	ENSAMXG00000038905	-	98	55.833
ENSAMXG00000043978	-	88	31.304	ENSAMXG00000038507	-	86	31.304
ENSAMXG00000043978	-	91	61.333	ENSAMXG00000041861	-	89	61.333
ENSAMXG00000043978	-	87	39.496	ENSAMXG00000038235	snai2	51	39.496
ENSAMXG00000043978	-	93	59.532	ENSAMXG00000039182	-	64	57.951
ENSAMXG00000043978	-	88	58.214	ENSAMXG00000037326	-	92	58.214
ENSAMXG00000043978	-	99	51.225	ENSAMXG00000042746	-	96	51.225
ENSAMXG00000043978	-	90	41.736	ENSAMXG00000033299	-	73	40.882
ENSAMXG00000043978	-	86	58.228	ENSAMXG00000037709	-	81	58.228
ENSAMXG00000043978	-	86	65.532	ENSAMXG00000037703	-	89	65.532
ENSAMXG00000043978	-	88	60.059	ENSAMXG00000042275	-	90	60.059
ENSAMXG00000043978	-	87	50.000	ENSAMXG00000007441	-	57	50.000
ENSAMXG00000043978	-	88	56.000	ENSAMXG00000029783	-	87	56.000
ENSAMXG00000043978	-	91	57.851	ENSAMXG00000043423	-	81	57.851
ENSAMXG00000043978	-	87	38.525	ENSAMXG00000033001	-	53	38.525
ENSAMXG00000043978	-	88	58.912	ENSAMXG00000042633	-	97	58.912
ENSAMXG00000043978	-	91	61.611	ENSAMXG00000043291	-	74	61.611
ENSAMXG00000043978	-	88	40.265	ENSAMXG00000035246	-	69	40.265
ENSAMXG00000043978	-	88	58.511	ENSAMXG00000030742	-	99	58.511
ENSAMXG00000043978	-	87	64.957	ENSAMXG00000040630	-	95	64.979
ENSAMXG00000043978	-	87	61.538	ENSAMXG00000044028	-	95	61.538
ENSAMXG00000043978	-	98	52.976	ENSAMXG00000034096	-	93	52.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043978	-	88	50.473	ENSAPLG00000012660	-	81	50.610	Anas_platyrhynchos
ENSAMXG00000043978	-	97	51.376	ENSCPBG00000002014	-	68	51.376	Chrysemys_picta_bellii
ENSAMXG00000043978	-	89	55.414	ENSEASG00005020341	-	96	55.414	Equus_asinus_asinus
ENSAMXG00000043978	-	94	52.294	ENSECAG00000039445	-	93	52.294	Equus_caballus
ENSAMXG00000043978	-	89	55.414	ENSECAG00000017293	-	96	55.414	Equus_caballus
ENSAMXG00000043978	-	89	62.105	ENSGAGG00000000971	-	92	62.105	Gopherus_agassizii
ENSAMXG00000043978	-	87	56.318	ENSGAGG00000008773	-	90	56.318	Gopherus_agassizii
ENSAMXG00000043978	-	91	54.733	ENSGAGG00000006960	-	79	54.734	Gopherus_agassizii
ENSAMXG00000043978	-	85	55.242	ENSGAGG00000009739	-	99	55.242	Gopherus_agassizii
ENSAMXG00000043978	-	89	55.422	ENSGAGG00000017986	-	96	58.065	Gopherus_agassizii
ENSAMXG00000043978	-	86	54.651	ENSGAGG00000015451	-	85	54.651	Gopherus_agassizii
ENSAMXG00000043978	-	87	54.962	ENSGAGG00000011574	-	81	54.962	Gopherus_agassizii
ENSAMXG00000043978	-	86	58.919	ENSGAGG00000004740	-	91	58.919	Gopherus_agassizii
ENSAMXG00000043978	-	87	53.333	ENSGAGG00000019349	-	73	53.333	Gopherus_agassizii
ENSAMXG00000043978	-	85	57.082	ENSGAGG00000006683	-	96	56.250	Gopherus_agassizii
ENSAMXG00000043978	-	83	57.600	ENSIPUG00000015177	-	67	57.600	Ictalurus_punctatus
ENSAMXG00000043978	-	88	57.784	ENSIPUG00000015400	-	97	57.784	Ictalurus_punctatus
ENSAMXG00000043978	-	87	54.140	ENSMPUG00000008437	-	89	54.140	Mustela_putorius_furo
ENSAMXG00000043978	-	87	56.923	ENSPTIG00000009259	-	97	56.923	Panthera_tigris_altaica
ENSAMXG00000043978	-	88	53.704	ENSPSIG00000016247	-	53	53.704	Pelodiscus_sinensis
ENSAMXG00000043978	-	94	62.094	ENSPNAG00000016045	-	75	62.094	Pygocentrus_nattereri
ENSAMXG00000043978	-	88	59.184	ENSPNAG00000021942	-	92	59.184	Pygocentrus_nattereri
ENSAMXG00000043978	-	92	63.380	ENSPNAG00000003526	-	83	63.380	Pygocentrus_nattereri
ENSAMXG00000043978	-	88	56.917	ENSPNAG00000024704	-	91	56.917	Pygocentrus_nattereri
ENSAMXG00000043978	-	98	59.659	ENSPNAG00000005914	-	81	59.659	Pygocentrus_nattereri
ENSAMXG00000043978	-	96	58.130	ENSPNAG00000002287	-	94	56.863	Pygocentrus_nattereri
ENSAMXG00000043978	-	87	63.782	ENSPNAG00000018471	-	81	63.782	Pygocentrus_nattereri
ENSAMXG00000043978	-	88	59.459	ENSPNAG00000003919	-	96	59.459	Pygocentrus_nattereri
ENSAMXG00000043978	-	95	56.085	ENSPNAG00000017455	-	89	56.075	Pygocentrus_nattereri
ENSAMXG00000043978	-	97	54.455	ENSPNAG00000000783	-	99	54.455	Pygocentrus_nattereri
ENSAMXG00000043978	-	89	60.736	ENSPNAG00000012366	-	94	57.714	Pygocentrus_nattereri
ENSAMXG00000043978	-	88	60.000	ENSPNAG00000012138	-	95	60.000	Pygocentrus_nattereri
ENSAMXG00000043978	-	88	61.345	ENSPNAG00000007072	-	92	61.345	Pygocentrus_nattereri
ENSAMXG00000043978	-	82	65.263	ENSPNAG00000016025	-	90	65.263	Pygocentrus_nattereri
ENSAMXG00000043978	-	87	63.194	ENSPNAG00000008653	-	96	63.194	Pygocentrus_nattereri
ENSAMXG00000043978	-	85	63.362	ENSPNAG00000018437	-	78	63.362	Pygocentrus_nattereri
ENSAMXG00000043978	-	100	60.227	ENSPNAG00000028765	-	99	60.227	Pygocentrus_nattereri
ENSAMXG00000043978	-	85	52.443	ENSPNAG00000029386	-	87	50.000	Pygocentrus_nattereri
ENSAMXG00000043978	-	88	61.062	ENSPNAG00000017479	-	82	61.062	Pygocentrus_nattereri
ENSAMXG00000043978	-	88	55.000	ENSUAMG00000027415	-	85	55.000	Ursus_americanus
ENSAMXG00000043978	-	98	52.888	ENSUAMG00000027384	-	92	52.870	Ursus_americanus
ENSAMXG00000043978	-	86	56.497	ENSVPAG00000002698	-	99	56.497	Vicugna_pacos