EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000044007 (Gene tree)
Gene ID: 103044309
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 25490 bases
Position: chr22:28163645-28189134
Accession: 103044309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030225	PseudoU_synth_1	PF01416.20	3e-31	1	1
ENSAMXP00000043768	PseudoU_synth_1	PF01416.20	3.5e-29	1	1
ENSAMXP00000007231	PseudoU_synth_1	PF01416.20	6.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000007231	-	921	-	ENSAMXP00000007231	306 (aa)	-	W5KI19
ENSAMXT00000037661	-	1500	XM_022682748	ENSAMXP00000030225	293 (aa)	XP_022538469	UPI000BBD93AB
ENSAMXT00000033258	-	1597	-	ENSAMXP00000043768	271 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000044007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000044007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000044007	pusl1	96	47.518	ENSG00000169972	PUSL1	98	44.715	Homo_sapiens
ENSAMXG00000044007	pusl1	99	57.778	ENSAPOG00000016290	pusl1	98	58.419	Acanthochromis_polyacanthus
ENSAMXG00000044007	pusl1	93	47.810	ENSAMEG00000013752	PUSL1	95	43.706	Ailuropoda_melanoleuca
ENSAMXG00000044007	pusl1	95	60.000	ENSACIG00000015240	pusl1	100	60.584	Amphilophus_citrinellus
ENSAMXG00000044007	pusl1	94	58.423	ENSAOCG00000019419	pusl1	84	58.423	Amphiprion_ocellaris
ENSAMXG00000044007	pusl1	99	57.778	ENSAPEG00000005452	pusl1	97	58.076	Amphiprion_percula
ENSAMXG00000044007	pusl1	95	62.633	ENSATEG00000024154	pusl1	94	62.633	Anabas_testudineus
ENSAMXG00000044007	pusl1	94	53.069	ENSAPLG00000004946	PUSL1	93	53.069	Anas_platyrhynchos
ENSAMXG00000044007	pusl1	94	54.054	ENSACAG00000014111	PUSL1	98	54.054	Anolis_carolinensis
ENSAMXG00000044007	pusl1	96	49.291	ENSANAG00000037456	PUSL1	93	49.291	Aotus_nancymaae
ENSAMXG00000044007	pusl1	96	61.832	ENSACLG00000008675	pusl1	94	62.411	Astatotilapia_calliptera
ENSAMXG00000044007	pusl1	93	50.000	ENSBTAG00000007619	PUSL1	94	50.000	Bos_taurus
ENSAMXG00000044007	pusl1	96	48.936	ENSCJAG00000010972	PUSL1	93	48.936	Callithrix_jacchus
ENSAMXG00000044007	pusl1	93	45.091	ENSCAFG00000019291	PUSL1	90	45.091	Canis_familiaris
ENSAMXG00000044007	pusl1	93	46.545	ENSCAFG00020011568	PUSL1	90	46.545	Canis_lupus_dingo
ENSAMXG00000044007	pusl1	93	50.000	ENSCHIG00000012615	PUSL1	95	50.000	Capra_hircus
ENSAMXG00000044007	pusl1	93	45.091	ENSCPOG00000005149	PUSL1	90	45.091	Cavia_porcellus
ENSAMXG00000044007	pusl1	96	48.936	ENSCCAG00000027475	PUSL1	93	48.936	Cebus_capucinus
ENSAMXG00000044007	pusl1	96	47.518	ENSCATG00000018260	PUSL1	93	47.518	Cercocebus_atys
ENSAMXG00000044007	pusl1	93	46.909	ENSCLAG00000005232	PUSL1	90	46.909	Chinchilla_lanigera
ENSAMXG00000044007	pusl1	96	47.350	ENSCSAG00000000680	PUSL1	93	47.350	Chlorocebus_sabaeus
ENSAMXG00000044007	pusl1	96	56.107	ENSCPBG00000022621	PUSL1	96	58.065	Chrysemys_picta_bellii
ENSAMXG00000044007	pusl1	98	46.897	ENSCANG00000034373	PUSL1	96	46.897	Colobus_angolensis_palliatus
ENSAMXG00000044007	pusl1	93	48.175	ENSCGRG00001012429	Pusl1	94	48.175	Cricetulus_griseus_chok1gshd
ENSAMXG00000044007	pusl1	93	48.175	ENSCGRG00000006466	Pusl1	94	48.175	Cricetulus_griseus_crigri
ENSAMXG00000044007	pusl1	95	61.429	ENSCSEG00000005159	pusl1	94	61.429	Cynoglossus_semilaevis
ENSAMXG00000044007	pusl1	87	52.766	ENSCVAG00000012923	pusl1	91	52.766	Cyprinodon_variegatus
ENSAMXG00000044007	pusl1	98	66.897	ENSDARG00000074565	pusl1	99	68.327	Danio_rerio
ENSAMXG00000044007	pusl1	94	32.787	FBgn0083976	CG34140	99	32.787	Drosophila_melanogaster
ENSAMXG00000044007	pusl1	93	49.270	ENSECAG00000006248	PUSL1	90	49.270	Equus_caballus
ENSAMXG00000044007	pusl1	96	45.614	ENSEEUG00000000837	PUSL1	96	45.614	Erinaceus_europaeus
ENSAMXG00000044007	pusl1	99	59.794	ENSELUG00000015945	pusl1	99	59.794	Esox_lucius
ENSAMXG00000044007	pusl1	97	47.902	ENSFCAG00000007617	PUSL1	95	47.902	Felis_catus
ENSAMXG00000044007	pusl1	99	60.662	ENSFHEG00000006370	pusl1	98	61.644	Fundulus_heteroclitus
ENSAMXG00000044007	pusl1	95	61.922	ENSGMOG00000019388	pusl1	99	61.922	Gadus_morhua
ENSAMXG00000044007	pusl1	97	54.196	ENSGALG00000001714	PUSL1	98	54.196	Gallus_gallus
ENSAMXG00000044007	pusl1	99	59.926	ENSGAFG00000007546	pusl1	97	60.351	Gambusia_affinis
ENSAMXG00000044007	pusl1	96	59.316	ENSGACG00000007848	pusl1	93	59.717	Gasterosteus_aculeatus
ENSAMXG00000044007	pusl1	94	56.475	ENSGAGG00000004730	PUSL1	95	56.475	Gopherus_agassizii
ENSAMXG00000044007	pusl1	91	47.581	ENSGGOG00000005364	PUSL1	96	47.581	Gorilla_gorilla
ENSAMXG00000044007	pusl1	96	61.450	ENSHBUG00000001264	pusl1	94	62.057	Haplochromis_burtoni
ENSAMXG00000044007	pusl1	94	45.683	ENSHGLG00000017570	PUSL1	91	45.683	Heterocephalus_glaber_female
ENSAMXG00000044007	pusl1	91	46.586	ENSHGLG00100007641	PUSL1	94	41.724	Heterocephalus_glaber_male
ENSAMXG00000044007	pusl1	95	58.077	ENSHCOG00000010077	pusl1	100	59.058	Hippocampus_comes
ENSAMXG00000044007	pusl1	97	75.094	ENSIPUG00000023921	pusl1	97	75.972	Ictalurus_punctatus
ENSAMXG00000044007	pusl1	93	48.000	ENSSTOG00000001783	PUSL1	90	44.369	Ictidomys_tridecemlineatus
ENSAMXG00000044007	pusl1	93	51.095	ENSJJAG00000020471	Pusl1	93	51.095	Jaculus_jaculus
ENSAMXG00000044007	pusl1	96	59.160	ENSKMAG00000005154	pusl1	93	58.242	Kryptolebias_marmoratus
ENSAMXG00000044007	pusl1	95	60.854	ENSLBEG00000013469	pusl1	97	60.854	Labrus_bergylta
ENSAMXG00000044007	pusl1	70	50.777	ENSLACG00000018795	PUSL1	95	50.777	Latimeria_chalumnae
ENSAMXG00000044007	pusl1	100	57.664	ENSLOCG00000002210	pusl1	98	58.763	Lepisosteus_oculatus
ENSAMXG00000044007	pusl1	90	49.187	ENSLAFG00000013685	PUSL1	97	48.263	Loxodonta_africana
ENSAMXG00000044007	pusl1	96	47.163	ENSMFAG00000046288	PUSL1	93	47.163	Macaca_fascicularis
ENSAMXG00000044007	pusl1	95	41.637	ENSMMUG00000016279	PUSL1	92	41.637	Macaca_mulatta
ENSAMXG00000044007	pusl1	93	47.636	ENSMNEG00000037989	PUSL1	91	47.636	Macaca_nemestrina
ENSAMXG00000044007	pusl1	95	62.411	ENSMAMG00000016538	pusl1	93	62.411	Mastacembelus_armatus
ENSAMXG00000044007	pusl1	96	61.832	ENSMZEG00005026990	pusl1	94	62.411	Maylandia_zebra
ENSAMXG00000044007	pusl1	94	54.122	ENSMGAG00000003037	PUSL1	95	54.122	Meleagris_gallopavo
ENSAMXG00000044007	pusl1	93	48.540	ENSMAUG00000019924	Pusl1	94	48.540	Mesocricetus_auratus
ENSAMXG00000044007	pusl1	92	49.451	ENSMICG00000014171	PUSL1	93	49.451	Microcebus_murinus
ENSAMXG00000044007	pusl1	93	49.270	ENSMOCG00000005602	Pusl1	94	49.270	Microtus_ochrogaster
ENSAMXG00000044007	pusl1	95	58.175	ENSMMOG00000003269	pusl1	100	58.571	Mola_mola
ENSAMXG00000044007	pusl1	95	59.364	ENSMALG00000021686	pusl1	93	59.364	Monopterus_albus
ENSAMXG00000044007	pusl1	93	49.635	MGP_CAROLIEiJ_G0026911	Pusl1	94	49.635	Mus_caroli
ENSAMXG00000044007	pusl1	93	48.540	ENSMUSG00000051557	Pusl1	94	48.540	Mus_musculus
ENSAMXG00000044007	pusl1	93	50.000	MGP_PahariEiJ_G0029260	Pusl1	94	50.000	Mus_pahari
ENSAMXG00000044007	pusl1	93	49.270	MGP_SPRETEiJ_G0027906	Pusl1	94	49.270	Mus_spretus
ENSAMXG00000044007	pusl1	92	48.800	ENSMPUG00000014313	PUSL1	90	48.718	Mustela_putorius_furo
ENSAMXG00000044007	pusl1	92	49.451	ENSNGAG00000004647	Pusl1	82	49.451	Nannospalax_galili
ENSAMXG00000044007	pusl1	89	60.569	ENSNBRG00000014762	pusl1	89	60.569	Neolamprologus_brichardi
ENSAMXG00000044007	pusl1	93	49.609	ENSNLEG00000000051	PUSL1	98	45.620	Nomascus_leucogenys
ENSAMXG00000044007	pusl1	93	47.273	ENSMEUG00000011649	-	96	47.273	Notamacropus_eugenii
ENSAMXG00000044007	pusl1	93	37.591	ENSMEUG00000005176	-	99	37.591	Notamacropus_eugenii
ENSAMXG00000044007	pusl1	94	46.377	ENSODEG00000008247	PUSL1	89	46.377	Octodon_degus
ENSAMXG00000044007	pusl1	96	62.214	ENSONIG00000019361	pusl1	93	62.766	Oreochromis_niloticus
ENSAMXG00000044007	pusl1	95	59.220	ENSORLG00000016228	pusl1	95	59.220	Oryzias_latipes
ENSAMXG00000044007	pusl1	95	59.574	ENSORLG00020013710	pusl1	95	59.574	Oryzias_latipes_hni
ENSAMXG00000044007	pusl1	95	58.156	ENSORLG00015008715	pusl1	99	58.156	Oryzias_latipes_hsok
ENSAMXG00000044007	pusl1	97	60.279	ENSOMEG00000018897	pusl1	99	60.279	Oryzias_melastigma
ENSAMXG00000044007	pusl1	93	48.727	ENSOGAG00000031692	PUSL1	96	48.727	Otolemur_garnettii
ENSAMXG00000044007	pusl1	90	50.202	ENSOARG00000004905	PUSL1	98	49.231	Ovis_aries
ENSAMXG00000044007	pusl1	96	47.163	ENSPPAG00000029283	PUSL1	93	47.163	Pan_paniscus
ENSAMXG00000044007	pusl1	93	48.727	ENSPPRG00000023329	PUSL1	91	48.727	Panthera_pardus
ENSAMXG00000044007	pusl1	91	48.790	ENSPTIG00000018532	PUSL1	96	48.077	Panthera_tigris_altaica
ENSAMXG00000044007	pusl1	96	46.809	ENSPTRG00000000021	PUSL1	93	46.809	Pan_troglodytes
ENSAMXG00000044007	pusl1	96	47.163	ENSPANG00000000591	PUSL1	93	47.163	Papio_anubis
ENSAMXG00000044007	pusl1	96	68.561	ENSPKIG00000002447	pusl1	97	68.929	Paramormyrops_kingsleyae
ENSAMXG00000044007	pusl1	96	55.344	ENSPSIG00000002781	PUSL1	97	55.344	Pelodiscus_sinensis
ENSAMXG00000044007	pusl1	93	57.455	ENSPMGG00000011051	pusl1	99	57.455	Periophthalmus_magnuspinnatus
ENSAMXG00000044007	pusl1	93	48.905	ENSPEMG00000013541	Pusl1	94	48.905	Peromyscus_maniculatus_bairdii
ENSAMXG00000044007	pusl1	94	48.201	ENSPCIG00000007816	-	65	47.703	Phascolarctos_cinereus
ENSAMXG00000044007	pusl1	95	60.536	ENSPFOG00000015448	pusl1	96	59.854	Poecilia_formosa
ENSAMXG00000044007	pusl1	98	60.274	ENSPLAG00000004348	pusl1	98	60.274	Poecilia_latipinna
ENSAMXG00000044007	pusl1	98	60.274	ENSPMEG00000000931	pusl1	98	60.274	Poecilia_mexicana
ENSAMXG00000044007	pusl1	98	59.310	ENSPREG00000002324	pusl1	98	59.310	Poecilia_reticulata
ENSAMXG00000044007	pusl1	92	46.800	ENSPPYG00000002014	PUSL1	90	46.800	Pongo_abelii
ENSAMXG00000044007	pusl1	68	48.387	ENSPCAG00000002272	PUSL1	77	48.387	Procavia_capensis
ENSAMXG00000044007	pusl1	65	58.333	ENSPVAG00000001016	PUSL1	66	54.930	Pteropus_vampyrus
ENSAMXG00000044007	pusl1	81	61.506	ENSPNYG00000006588	pusl1	99	61.506	Pundamilia_nyererei
ENSAMXG00000044007	pusl1	98	79.401	ENSPNAG00000024441	pusl1	100	79.239	Pygocentrus_nattereri
ENSAMXG00000044007	pusl1	93	49.091	ENSRNOG00000022354	Pusl1	95	49.091	Rattus_norvegicus
ENSAMXG00000044007	pusl1	93	47.810	ENSRBIG00000036842	PUSL1	90	47.810	Rhinopithecus_bieti
ENSAMXG00000044007	pusl1	93	47.810	ENSRROG00000030704	PUSL1	90	47.810	Rhinopithecus_roxellana
ENSAMXG00000044007	pusl1	93	49.020	ENSSBOG00000032249	PUSL1	96	47.940	Saimiri_boliviensis_boliviensis
ENSAMXG00000044007	pusl1	51	53.285	ENSSHAG00000004840	-	85	49.390	Sarcophilus_harrisii
ENSAMXG00000044007	pusl1	95	65.649	ENSSFOG00015008281	pusl1	91	66.547	Scleropages_formosus
ENSAMXG00000044007	pusl1	95	62.057	ENSSMAG00000007187	pusl1	93	62.057	Scophthalmus_maximus
ENSAMXG00000044007	pusl1	96	61.832	ENSSDUG00000000287	pusl1	94	58.423	Seriola_dumerili
ENSAMXG00000044007	pusl1	96	62.214	ENSSLDG00000009605	pusl1	90	63.121	Seriola_lalandi_dorsalis
ENSAMXG00000044007	pusl1	62	49.704	ENSSARG00000005323	-	94	48.588	Sorex_araneus
ENSAMXG00000044007	pusl1	92	56.204	ENSSPAG00000002528	pusl1	100	56.204	Stegastes_partitus
ENSAMXG00000044007	pusl1	96	47.703	ENSSSCG00000003338	PUSL1	92	47.703	Sus_scrofa
ENSAMXG00000044007	pusl1	92	53.114	ENSTGUG00000003214	PUSL1	96	52.920	Taeniopygia_guttata
ENSAMXG00000044007	pusl1	99	60.274	ENSTRUG00000010102	pusl1	98	60.274	Takifugu_rubripes
ENSAMXG00000044007	pusl1	66	56.044	ENSTNIG00000005789	pusl1	82	56.044	Tetraodon_nigroviridis
ENSAMXG00000044007	pusl1	64	43.182	ENSTBEG00000005001	PUSL1	74	43.182	Tupaia_belangeri
ENSAMXG00000044007	pusl1	93	43.636	ENSTTRG00000017030	PUSL1	94	41.958	Tursiops_truncatus
ENSAMXG00000044007	pusl1	88	48.133	ENSUAMG00000012801	PUSL1	80	48.133	Ursus_americanus
ENSAMXG00000044007	pusl1	88	48.133	ENSUMAG00000002084	PUSL1	80	48.133	Ursus_maritimus
ENSAMXG00000044007	pusl1	97	45.614	ENSVVUG00000004320	PUSL1	91	40.764	Vulpes_vulpes
ENSAMXG00000044007	pusl1	76	51.316	ENSXETG00000011145	pusl1	99	51.316	Xenopus_tropicalis
ENSAMXG00000044007	pusl1	95	56.631	ENSXCOG00000017748	pusl1	99	56.631	Xiphophorus_couchianus
ENSAMXG00000044007	pusl1	98	60.616	ENSXMAG00000018846	pusl1	98	60.616	Xiphophorus_maculatus