EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000044123 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1167 bases
Position: chr17:26488821-26489987
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029261	RVT_1	PF00078.27	4.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000038911	-	1167	-	ENSAMXP00000029261	388 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000044123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000044123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000044123	-	64	31.373	ENSAMXG00000034428	-	64	31.373
ENSAMXG00000044123	-	51	32.663	ENSAMXG00000038422	-	53	32.663
ENSAMXG00000044123	-	96	30.526	ENSAMXG00000031289	-	65	30.295
ENSAMXG00000044123	-	70	31.047	ENSAMXG00000036163	-	69	31.047
ENSAMXG00000044123	-	98	32.216	ENSAMXG00000033666	-	68	32.031
ENSAMXG00000044123	-	100	97.938	ENSAMXG00000035582	-	75	97.938
ENSAMXG00000044123	-	74	31.488	ENSAMXG00000029344	-	86	30.894
ENSAMXG00000044123	-	64	32.806	ENSAMXG00000032647	-	66	32.806
ENSAMXG00000044123	-	56	32.579	ENSAMXG00000029798	-	55	32.579
ENSAMXG00000044123	-	64	31.496	ENSAMXG00000035605	-	72	31.496
ENSAMXG00000044123	-	98	32.216	ENSAMXG00000033268	-	93	32.031
ENSAMXG00000044123	-	64	32.806	ENSAMXG00000038561	-	59	32.411
ENSAMXG00000044123	-	64	32.400	ENSAMXG00000036186	-	76	32.400
ENSAMXG00000044123	-	86	30.564	ENSAMXG00000034412	-	69	30.564
ENSAMXG00000044123	-	96	30.263	ENSAMXG00000029030	-	66	30.027
ENSAMXG00000044123	-	64	32.806	ENSAMXG00000031734	-	59	32.806
ENSAMXG00000044123	-	64	31.373	ENSAMXG00000029175	-	63	31.373
ENSAMXG00000044123	-	95	31.200	ENSAMXG00000040899	-	90	30.997
ENSAMXG00000044123	-	95	31.937	ENSAMXG00000038747	-	75	31.746
ENSAMXG00000044123	-	67	33.955	ENSAMXG00000043139	-	50	33.955
ENSAMXG00000044123	-	64	31.765	ENSAMXG00000042989	-	63	31.765
ENSAMXG00000044123	-	92	31.978	ENSAMXG00000030994	-	73	32.000
ENSAMXG00000044123	-	56	32.579	ENSAMXG00000031418	-	64	32.579
ENSAMXG00000044123	-	64	31.373	ENSAMXG00000030716	-	66	31.373
ENSAMXG00000044123	-	94	31.635	ENSAMXG00000037500	-	69	31.635
ENSAMXG00000044123	-	70	32.847	ENSAMXG00000041932	-	66	32.847
ENSAMXG00000044123	-	64	32.806	ENSAMXG00000042384	-	58	32.411
ENSAMXG00000044123	-	54	32.407	ENSAMXG00000031910	-	50	32.407
ENSAMXG00000044123	-	74	31.488	ENSAMXG00000042595	-	87	30.563
ENSAMXG00000044123	-	54	31.481	ENSAMXG00000043053	-	68	31.390
ENSAMXG00000044123	-	64	32.677	ENSAMXG00000033682	-	71	32.677
ENSAMXG00000044123	-	50	31.818	ENSAMXG00000042606	-	51	31.818
ENSAMXG00000044123	-	64	31.373	ENSAMXG00000039780	-	69	31.373
ENSAMXG00000044123	-	64	31.349	ENSAMXG00000036878	-	72	31.349
ENSAMXG00000044123	-	68	35.338	ENSAMXG00000033695	-	58	35.338
ENSAMXG00000044123	-	51	33.166	ENSAMXG00000044090	-	56	33.505
ENSAMXG00000044123	-	64	31.600	ENSAMXG00000043394	-	58	31.600
ENSAMXG00000044123	-	64	33.333	ENSAMXG00000039528	-	60	33.333
ENSAMXG00000044123	-	70	34.050	ENSAMXG00000029882	-	64	34.050
ENSAMXG00000044123	-	70	32.847	ENSAMXG00000029786	-	70	32.847
ENSAMXG00000044123	-	52	37.198	ENSAMXG00000031937	-	52	37.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000044123	-	55	30.357	ENSACIG00000019567	-	97	30.357	Amphilophus_citrinellus
ENSAMXG00000044123	-	97	39.276	ENSACLG00000001858	-	52	39.276	Astatotilapia_calliptera
ENSAMXG00000044123	-	51	34.500	ENSACLG00000015324	-	51	34.500	Astatotilapia_calliptera
ENSAMXG00000044123	-	67	30.970	ENSACLG00000010474	-	57	31.343	Astatotilapia_calliptera
ENSAMXG00000044123	-	67	31.522	ENSACLG00000013521	-	69	31.010	Astatotilapia_calliptera
ENSAMXG00000044123	-	72	30.420	ENSACLG00000002725	-	77	30.420	Astatotilapia_calliptera
ENSAMXG00000044123	-	67	31.835	ENSACLG00000002685	-	72	31.481	Astatotilapia_calliptera
ENSAMXG00000044123	-	67	32.342	ENSACLG00000012352	-	53	32.342	Astatotilapia_calliptera
ENSAMXG00000044123	-	97	37.949	ENSACLG00000005489	-	56	37.949	Astatotilapia_calliptera
ENSAMXG00000044123	-	97	38.760	ENSACLG00000007954	-	56	38.760	Astatotilapia_calliptera
ENSAMXG00000044123	-	51	34.500	ENSACLG00000024587	-	62	32.218	Astatotilapia_calliptera
ENSAMXG00000044123	-	67	30.418	ENSACLG00000005259	-	80	30.418	Astatotilapia_calliptera
ENSAMXG00000044123	-	51	33.171	ENSACLG00000022966	-	55	33.171	Astatotilapia_calliptera
ENSAMXG00000044123	-	57	30.493	ENSACLG00000004754	-	58	30.159	Astatotilapia_calliptera
ENSAMXG00000044123	-	65	30.859	ENSACLG00000021775	-	64	30.859	Astatotilapia_calliptera
ENSAMXG00000044123	-	69	30.000	ENSACLG00000001556	-	57	30.000	Astatotilapia_calliptera
ENSAMXG00000044123	-	61	31.950	ENSACLG00000005746	-	54	31.950	Astatotilapia_calliptera
ENSAMXG00000044123	-	66	33.074	ENSELUG00000008528	-	96	33.074	Esox_lucius
ENSAMXG00000044123	-	64	33.200	ENSELUG00000009527	-	75	33.200	Esox_lucius
ENSAMXG00000044123	-	60	32.922	ENSHBUG00000015916	-	50	32.922	Haplochromis_burtoni
ENSAMXG00000044123	-	72	30.662	ENSHBUG00000008975	-	84	30.662	Haplochromis_burtoni
ENSAMXG00000044123	-	67	30.970	ENSKMAG00000005036	-	89	30.824	Kryptolebias_marmoratus
ENSAMXG00000044123	-	74	32.013	ENSLBEG00000012381	-	61	32.013	Labrus_bergylta
ENSAMXG00000044123	-	74	32.343	ENSLBEG00000009636	-	61	32.343	Labrus_bergylta
ENSAMXG00000044123	-	74	32.343	ENSLBEG00000018787	-	81	32.343	Labrus_bergylta
ENSAMXG00000044123	-	74	32.673	ENSLBEG00000019432	-	86	32.673	Labrus_bergylta
ENSAMXG00000044123	-	63	34.483	ENSLBEG00000008169	-	50	34.483	Labrus_bergylta
ENSAMXG00000044123	-	72	32.423	ENSLBEG00000003122	-	64	32.423	Labrus_bergylta
ENSAMXG00000044123	-	69	32.210	ENSLBEG00000020970	-	56	32.210	Labrus_bergylta
ENSAMXG00000044123	-	69	32.331	ENSLBEG00000007309	-	72	32.331	Labrus_bergylta
ENSAMXG00000044123	-	70	31.183	ENSMAMG00000006227	-	86	31.183	Mastacembelus_armatus
ENSAMXG00000044123	-	64	33.597	ENSMAMG00000011632	-	79	33.597	Mastacembelus_armatus
ENSAMXG00000044123	-	59	32.618	ENSMZEG00005010549	-	90	32.618	Maylandia_zebra
ENSAMXG00000044123	-	76	30.068	ENSMZEG00005028052	-	80	30.068	Maylandia_zebra
ENSAMXG00000044123	-	67	33.333	ENSMZEG00005027329	-	82	33.333	Maylandia_zebra
ENSAMXG00000044123	-	65	30.196	ENSMZEG00005021283	-	54	30.196	Maylandia_zebra
ENSAMXG00000044123	-	61	31.276	ENSMZEG00005008263	-	64	31.276	Maylandia_zebra
ENSAMXG00000044123	-	69	30.370	ENSMZEG00005017545	-	57	30.370	Maylandia_zebra
ENSAMXG00000044123	-	70	32.270	ENSMZEG00005014775	-	83	32.270	Maylandia_zebra
ENSAMXG00000044123	-	67	31.343	ENSMZEG00005023764	-	57	31.716	Maylandia_zebra
ENSAMXG00000044123	-	72	31.010	ENSMZEG00005018679	-	64	31.010	Maylandia_zebra
ENSAMXG00000044123	-	51	34.500	ENSMZEG00005005156	-	51	34.500	Maylandia_zebra
ENSAMXG00000044123	-	52	30.332	ENSMALG00000000917	-	93	30.332	Monopterus_albus
ENSAMXG00000044123	-	56	30.455	ENSMALG00000015013	-	95	30.455	Monopterus_albus
ENSAMXG00000044123	-	75	33.446	ENSORLG00000025058	-	75	33.446	Oryzias_latipes
ENSAMXG00000044123	-	54	31.651	ENSORLG00000028944	-	58	31.651	Oryzias_latipes
ENSAMXG00000044123	-	98	38.342	ENSORLG00000022075	-	67	38.684	Oryzias_latipes
ENSAMXG00000044123	-	67	35.361	ENSORLG00000024239	-	70	35.361	Oryzias_latipes
ENSAMXG00000044123	-	96	30.127	ENSORLG00000027843	-	63	30.435	Oryzias_latipes
ENSAMXG00000044123	-	94	30.376	ENSORLG00000024475	-	53	30.163	Oryzias_latipes
ENSAMXG00000044123	-	78	33.224	ENSORLG00000026529	-	63	33.224	Oryzias_latipes
ENSAMXG00000044123	-	67	30.112	ENSORLG00000022643	-	76	30.112	Oryzias_latipes
ENSAMXG00000044123	-	75	30.000	ENSORLG00000026336	-	69	30.000	Oryzias_latipes
ENSAMXG00000044123	-	97	30.597	ENSORLG00000026187	-	67	30.653	Oryzias_latipes
ENSAMXG00000044123	-	82	32.298	ENSORLG00000021977	-	72	32.298	Oryzias_latipes
ENSAMXG00000044123	-	94	30.270	ENSORLG00000025432	-	77	30.055	Oryzias_latipes
ENSAMXG00000044123	-	67	34.981	ENSORLG00020015750	-	56	34.981	Oryzias_latipes_hni
ENSAMXG00000044123	-	97	30.077	ENSORLG00020006709	-	66	30.105	Oryzias_latipes_hni
ENSAMXG00000044123	-	72	31.930	ENSORLG00020004647	-	68	32.982	Oryzias_latipes_hni
ENSAMXG00000044123	-	51	33.824	ENSORLG00020012794	-	83	33.824	Oryzias_latipes_hni
ENSAMXG00000044123	-	50	35.437	ENSORLG00020005670	-	76	35.437	Oryzias_latipes_hni
ENSAMXG00000044123	-	63	37.398	ENSORLG00020009746	-	71	37.398	Oryzias_latipes_hni
ENSAMXG00000044123	-	62	30.315	ENSORLG00020015149	-	84	30.142	Oryzias_latipes_hni
ENSAMXG00000044123	-	53	33.645	ENSORLG00020005292	-	58	33.645	Oryzias_latipes_hni
ENSAMXG00000044123	-	94	30.376	ENSORLG00020013078	-	77	30.163	Oryzias_latipes_hni
ENSAMXG00000044123	-	97	62.334	ENSORLG00020011415	-	60	62.234	Oryzias_latipes_hni
ENSAMXG00000044123	-	57	31.466	ENSORLG00020013020	-	75	31.154	Oryzias_latipes_hni
ENSAMXG00000044123	-	53	33.645	ENSORLG00015002671	-	65	35.514	Oryzias_latipes_hsok
ENSAMXG00000044123	-	58	38.428	ENSORLG00015014747	-	66	38.428	Oryzias_latipes_hsok
ENSAMXG00000044123	-	56	34.101	ENSORLG00015007204	-	66	34.101	Oryzias_latipes_hsok
ENSAMXG00000044123	-	63	30.556	ENSORLG00015006721	-	67	30.357	Oryzias_latipes_hsok
ENSAMXG00000044123	-	63	31.765	ENSORLG00015015092	-	56	31.095	Oryzias_latipes_hsok
ENSAMXG00000044123	-	69	31.317	ENSORLG00015005873	-	69	31.317	Oryzias_latipes_hsok
ENSAMXG00000044123	-	94	30.376	ENSORLG00015023090	-	77	30.163	Oryzias_latipes_hsok
ENSAMXG00000044123	-	60	37.975	ENSORLG00015004863	-	70	37.975	Oryzias_latipes_hsok
ENSAMXG00000044123	-	68	31.636	ENSORLG00015003642	-	75	31.636	Oryzias_latipes_hsok
ENSAMXG00000044123	-	68	33.712	ENSORLG00015010852	-	94	33.712	Oryzias_latipes_hsok
ENSAMXG00000044123	-	67	33.708	ENSORLG00015020206	-	70	33.708	Oryzias_latipes_hsok
ENSAMXG00000044123	-	69	31.915	ENSORLG00015014280	-	96	31.915	Oryzias_latipes_hsok
ENSAMXG00000044123	-	68	33.208	ENSORLG00015005354	-	58	33.208	Oryzias_latipes_hsok
ENSAMXG00000044123	-	76	33.110	ENSORLG00015014181	-	74	33.110	Oryzias_latipes_hsok
ENSAMXG00000044123	-	82	32.508	ENSORLG00015014080	-	76	32.508	Oryzias_latipes_hsok
ENSAMXG00000044123	-	51	41.089	ENSORLG00015015650	-	62	41.089	Oryzias_latipes_hsok
ENSAMXG00000044123	-	72	30.104	ENSORLG00015007505	-	71	30.104	Oryzias_latipes_hsok
ENSAMXG00000044123	-	64	31.496	ENSOMEG00000022878	-	80	31.496	Oryzias_melastigma
ENSAMXG00000044123	-	72	30.420	ENSOMEG00000023024	-	87	30.420	Oryzias_melastigma
ENSAMXG00000044123	-	74	30.375	ENSOMEG00000004801	-	81	30.717	Oryzias_melastigma
ENSAMXG00000044123	-	51	34.500	ENSOMEG00000023582	-	55	34.500	Oryzias_melastigma
ENSAMXG00000044123	-	64	37.349	ENSOMEG00000009762	-	84	33.645	Oryzias_melastigma
ENSAMXG00000044123	-	67	30.741	ENSOMEG00000005769	-	74	30.741	Oryzias_melastigma
ENSAMXG00000044123	-	70	33.088	ENSPKIG00000004150	-	79	33.088	Paramormyrops_kingsleyae
ENSAMXG00000044123	-	51	36.538	ENSPKIG00000025564	-	75	36.538	Paramormyrops_kingsleyae
ENSAMXG00000044123	-	55	35.747	ENSPMEG00000002869	-	54	35.747	Poecilia_mexicana
ENSAMXG00000044123	-	67	31.111	ENSPREG00000008374	-	61	31.111	Poecilia_reticulata
ENSAMXG00000044123	-	65	32.061	ENSPREG00000000138	-	53	32.061	Poecilia_reticulata
ENSAMXG00000044123	-	70	30.035	ENSPNYG00000023857	-	80	30.035	Pundamilia_nyererei
ENSAMXG00000044123	-	62	32.000	ENSPNAG00000013203	-	90	32.946	Pygocentrus_nattereri
ENSAMXG00000044123	-	64	34.375	ENSSDUG00000000707	-	79	34.375	Seriola_dumerili
ENSAMXG00000044123	-	70	32.000	ENSSPAG00000002518	-	56	32.000	Stegastes_partitus
ENSAMXG00000044123	-	71	32.246	ENSSPAG00000023050	-	78	32.246	Stegastes_partitus
ENSAMXG00000044123	-	51	34.123	ENSXMAG00000019451	-	55	34.123	Xiphophorus_maculatus