EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000005063 (Gene tree)
Gene ID: 105725508
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrKZ205964.1:5207481-5208629
Accession: 105725508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000000627	RRM_5	PF13893.6	6.1e-13	1	2
ENSANAP00000000627	RRM_5	PF13893.6	6.1e-13	2	2
ENSANAP00000000627	RRM_1	PF00076.22	3.3e-77	1	4
ENSANAP00000000627	RRM_1	PF00076.22	3.3e-77	2	4
ENSANAP00000000627	RRM_1	PF00076.22	3.3e-77	3	4
ENSANAP00000000627	RRM_1	PF00076.22	3.3e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000005384	PABPC5-201	1149	XM_012464574	ENSANAP00000000627	382 (aa)	XP_012319997	A0A2K5BW10

Gene Model

Click here to download ENSANAG00000005063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000005063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000005063	PABPC5	94	35.802	ENSANAG00000032553	ELAVL2	88	35.802
ENSANAG00000005063	PABPC5	99	58.933	ENSANAG00000017199	PABPC4L	85	60.112
ENSANAG00000005063	PABPC5	93	59.694	ENSANAG00000019429	-	98	59.375
ENSANAG00000005063	PABPC5	83	32.335	ENSANAG00000033266	-	51	33.333
ENSANAG00000005063	PABPC5	63	35.616	ENSANAG00000030590	CELF3	52	35.616
ENSANAG00000005063	PABPC5	94	63.333	ENSANAG00000027730	-	58	63.202
ENSANAG00000005063	PABPC5	74	30.508	ENSANAG00000018976	TRNAU1AP	58	30.409
ENSANAG00000005063	PABPC5	96	66.942	ENSANAG00000025079	PABPC4	60	67.135
ENSANAG00000005063	PABPC5	90	50.161	ENSANAG00000036324	-	61	52.632
ENSANAG00000005063	PABPC5	98	64.690	ENSANAG00000033352	-	58	65.730
ENSANAG00000005063	PABPC5	96	58.904	ENSANAG00000026826	PABPC1L	61	58.939
ENSANAG00000005063	PABPC5	98	57.303	ENSANAG00000026678	-	56	58.358
ENSANAG00000005063	PABPC5	96	55.923	ENSANAG00000019222	-	79	55.307
ENSANAG00000005063	PABPC5	95	53.333	ENSANAG00000035841	-	57	53.073
ENSANAG00000005063	PABPC5	93	59.694	ENSANAG00000019431	-	98	59.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000005063	PABPC5	100	100.000	ENSG00000174740	PABPC5	100	100.000	Homo_sapiens
ENSANAG00000005063	PABPC5	99	97.375	ENSAMEG00000020114	PABPC5	100	97.375	Ailuropoda_melanoleuca
ENSANAG00000005063	PABPC5	99	96.850	ENSBTAG00000019942	PABPC5	99	96.850	Bos_taurus
ENSANAG00000005063	PABPC5	100	99.476	ENSCJAG00000003665	PABPC5	100	99.476	Callithrix_jacchus
ENSANAG00000005063	PABPC5	99	96.850	ENSCAFG00000017452	PABPC5	99	96.850	Canis_familiaris
ENSANAG00000005063	PABPC5	99	96.850	ENSCHIG00000019004	PABPC5	99	96.850	Capra_hircus
ENSANAG00000005063	PABPC5	99	97.900	ENSTSYG00000036351	PABPC5	99	97.900	Carlito_syrichta
ENSANAG00000005063	PABPC5	99	88.421	ENSCAPG00000010714	PABPC5	99	88.421	Cavia_aperea
ENSANAG00000005063	PABPC5	99	94.488	ENSCPOG00000002555	PABPC5	99	94.488	Cavia_porcellus
ENSANAG00000005063	PABPC5	100	100.000	ENSCCAG00000032154	PABPC5	100	100.000	Cebus_capucinus
ENSANAG00000005063	PABPC5	100	99.738	ENSCATG00000043083	PABPC5	100	99.738	Cercocebus_atys
ENSANAG00000005063	PABPC5	99	95.801	ENSCLAG00000000647	PABPC5	99	95.801	Chinchilla_lanigera
ENSANAG00000005063	PABPC5	100	99.738	ENSCSAG00000000065	PABPC5	100	99.738	Chlorocebus_sabaeus
ENSANAG00000005063	PABPC5	100	99.738	ENSCANG00000011473	PABPC5	100	99.738	Colobus_angolensis_palliatus
ENSANAG00000005063	PABPC5	99	94.226	ENSCGRG00000018699	Pabpc5	99	94.226	Cricetulus_griseus_crigri
ENSANAG00000005063	PABPC5	99	78.796	ENSETEG00000011832	PABPC5	99	78.796	Echinops_telfairi
ENSANAG00000005063	PABPC5	99	97.638	ENSEASG00005014396	PABPC5	99	97.638	Equus_asinus_asinus
ENSANAG00000005063	PABPC5	99	97.638	ENSECAG00000003452	PABPC5	99	97.638	Equus_caballus
ENSANAG00000005063	PABPC5	99	97.113	ENSFCAG00000004998	PABPC5	99	97.113	Felis_catus
ENSANAG00000005063	PABPC5	99	96.325	ENSFDAG00000000126	PABPC5	99	96.325	Fukomys_damarensis
ENSANAG00000005063	PABPC5	100	100.000	ENSGGOG00000007622	PABPC5	100	100.000	Gorilla_gorilla
ENSANAG00000005063	PABPC5	95	96.774	ENSJJAG00000011960	Pabpc5	99	96.774	Jaculus_jaculus
ENSANAG00000005063	PABPC5	100	99.738	ENSMFAG00000024561	PABPC5	100	99.738	Macaca_fascicularis
ENSANAG00000005063	PABPC5	100	99.738	ENSMMUG00000011562	PABPC5	100	99.738	Macaca_mulatta
ENSANAG00000005063	PABPC5	100	99.738	ENSMNEG00000037604	PABPC5	100	99.738	Macaca_nemestrina
ENSANAG00000005063	PABPC5	100	99.738	ENSMLEG00000028318	PABPC5	100	99.738	Mandrillus_leucophaeus
ENSANAG00000005063	PABPC5	99	96.588	ENSMICG00000041706	PABPC5	99	96.588	Microcebus_murinus
ENSANAG00000005063	PABPC5	99	95.538	ENSMOCG00000001554	Pabpc5	99	95.538	Microtus_ochrogaster
ENSANAG00000005063	PABPC5	99	94.987	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.987	Mus_caroli
ENSANAG00000005063	PABPC5	99	95.515	ENSMUSG00000034732	Pabpc5	99	95.515	Mus_musculus
ENSANAG00000005063	PABPC5	99	95.801	MGP_PahariEiJ_G0031908	Pabpc5	99	95.801	Mus_pahari
ENSANAG00000005063	PABPC5	99	95.515	MGP_SPRETEiJ_G0034533	Pabpc5	99	95.515	Mus_spretus
ENSANAG00000005063	PABPC5	99	96.588	ENSMPUG00000018465	PABPC5	99	96.588	Mustela_putorius_furo
ENSANAG00000005063	PABPC5	99	96.063	ENSMLUG00000008244	PABPC5	99	96.063	Myotis_lucifugus
ENSANAG00000005063	PABPC5	95	95.853	ENSNGAG00000004371	Pabpc5	99	95.853	Nannospalax_galili
ENSANAG00000005063	PABPC5	100	100.000	ENSNLEG00000035086	PABPC5	100	100.000	Nomascus_leucogenys
ENSANAG00000005063	PABPC5	98	97.285	ENSOPRG00000000856	PABPC5	100	97.285	Ochotona_princeps
ENSANAG00000005063	PABPC5	99	97.900	ENSOCUG00000010919	PABPC5	99	97.900	Oryctolagus_cuniculus
ENSANAG00000005063	PABPC5	99	96.850	ENSOGAG00000006882	PABPC5	99	96.850	Otolemur_garnettii
ENSANAG00000005063	PABPC5	99	97.113	ENSOARG00000010260	PABPC5	99	97.113	Ovis_aries
ENSANAG00000005063	PABPC5	100	99.738	ENSPPAG00000007378	PABPC5	100	99.738	Pan_paniscus
ENSANAG00000005063	PABPC5	99	97.113	ENSPPRG00000010742	PABPC5	99	97.113	Panthera_pardus
ENSANAG00000005063	PABPC5	99	97.113	ENSPTIG00000001480	PABPC5	99	97.113	Panthera_tigris_altaica
ENSANAG00000005063	PABPC5	100	100.000	ENSPTRG00000022078	PABPC5	100	100.000	Pan_troglodytes
ENSANAG00000005063	PABPC5	100	99.738	ENSPANG00000018282	PABPC5	100	99.738	Papio_anubis
ENSANAG00000005063	PABPC5	99	95.013	ENSPEMG00000000171	Pabpc5	99	95.013	Peromyscus_maniculatus_bairdii
ENSANAG00000005063	PABPC5	100	100.000	ENSPPYG00000020526	PABPC5	100	100.000	Pongo_abelii
ENSANAG00000005063	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSANAG00000005063	PABPC5	99	97.375	ENSPCOG00000000676	PABPC5	99	97.375	Propithecus_coquereli
ENSANAG00000005063	PABPC5	99	97.375	ENSPVAG00000006465	PABPC5	99	97.375	Pteropus_vampyrus
ENSANAG00000005063	PABPC5	99	95.538	ENSRNOG00000003354	Pabpc5	99	95.538	Rattus_norvegicus
ENSANAG00000005063	PABPC5	100	99.738	ENSRBIG00000011760	PABPC5	100	99.738	Rhinopithecus_bieti
ENSANAG00000005063	PABPC5	100	99.738	ENSRROG00000036708	PABPC5	100	99.738	Rhinopithecus_roxellana
ENSANAG00000005063	PABPC5	100	99.738	ENSSBOG00000008658	PABPC5	100	99.738	Saimiri_boliviensis_boliviensis
ENSANAG00000005063	PABPC5	99	94.226	ENSSARG00000014012	PABPC5	99	94.226	Sorex_araneus
ENSANAG00000005063	PABPC5	99	96.850	ENSSSCG00000040194	PABPC5	99	96.850	Sus_scrofa
ENSANAG00000005063	PABPC5	99	98.163	ENSTBEG00000016482	PABPC5	99	98.163	Tupaia_belangeri
ENSANAG00000005063	PABPC5	99	96.850	ENSUAMG00000013627	PABPC5	99	96.850	Ursus_americanus
ENSANAG00000005063	PABPC5	99	96.588	ENSUMAG00000023934	PABPC5	99	96.588	Ursus_maritimus
ENSANAG00000005063	PABPC5	99	97.375	ENSVPAG00000001063	PABPC5	99	97.375	Vicugna_pacos
ENSANAG00000005063	PABPC5	99	97.113	ENSVVUG00000013172	PABPC5	99	97.113	Vulpes_vulpes