EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000017199 (Gene tree)
Gene ID: 105710750
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 1284 bases
Position: chrKZ198906.1:7383313-7384596
Accession: 105710750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000002141	RRM_5	PF13893.6	4.8e-14	1	3
ENSANAP00000002141	RRM_5	PF13893.6	4.8e-14	2	3
ENSANAP00000002141	RRM_5	PF13893.6	4.8e-14	3	3
ENSANAP00000002141	RRM_1	PF00076.22	5.7e-85	1	4
ENSANAP00000002141	RRM_1	PF00076.22	5.7e-85	2	4
ENSANAP00000002141	RRM_1	PF00076.22	5.7e-85	3	4
ENSANAP00000002141	RRM_1	PF00076.22	5.7e-85	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000018057	PABPC4L-201	1284	XM_012443230	ENSANAP00000002141	427 (aa)	XP_012298653	A0A2K5C0B0

Gene Model

Click here to download ENSANAG00000017199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000017199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000017199	PABPC4L	62	30.508	ENSANAG00000023645	-	64	30.508
ENSANAG00000017199	PABPC4L	66	30.220	ENSANAG00000038017	-	62	30.108
ENSANAG00000017199	PABPC4L	61	31.746	ENSANAG00000031609	-	53	31.522
ENSANAG00000017199	PABPC4L	85	63.265	ENSANAG00000019431	-	98	63.265
ENSANAG00000017199	PABPC4L	85	60.112	ENSANAG00000005063	PABPC5	99	58.933
ENSANAG00000017199	PABPC4L	76	30.252	ENSANAG00000037170	-	88	30.252
ENSANAG00000017199	PABPC4L	84	41.530	ENSANAG00000031025	SF3B4	54	41.530
ENSANAG00000017199	PABPC4L	87	71.081	ENSANAG00000033352	-	63	71.081
ENSANAG00000017199	PABPC4L	87	67.027	ENSANAG00000027730	-	61	67.027
ENSANAG00000017199	PABPC4L	85	63.265	ENSANAG00000019429	-	98	63.265
ENSANAG00000017199	PABPC4L	87	73.514	ENSANAG00000025079	PABPC4	61	73.514
ENSANAG00000017199	PABPC4L	90	62.259	ENSANAG00000026826	PABPC1L	62	62.259
ENSANAG00000017199	PABPC4L	87	60.745	ENSANAG00000026678	-	58	61.299
ENSANAG00000017199	PABPC4L	84	57.542	ENSANAG00000035841	-	62	57.542
ENSANAG00000017199	PABPC4L	84	32.317	ENSANAG00000018976	TRNAU1AP	53	30.303
ENSANAG00000017199	PABPC4L	75	58.562	ENSANAG00000036324	-	65	54.859
ENSANAG00000017199	PABPC4L	88	60.270	ENSANAG00000019222	-	82	60.270
ENSANAG00000017199	PABPC4L	75	42.105	ENSANAG00000028883	-	89	45.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000017199	PABPC4L	87	97.027	ENSG00000254535	PABPC4L	100	97.027	Homo_sapiens
ENSANAG00000017199	PABPC4L	86	87.534	ENSBTAG00000046902	PABPC4L	99	87.534	Bos_taurus
ENSANAG00000017199	PABPC4L	100	96.729	ENSCJAG00000045332	PABPC4L	100	96.729	Callithrix_jacchus
ENSANAG00000017199	PABPC4L	89	73.913	ENSCAFG00020019182	-	54	73.913	Canis_lupus_dingo
ENSANAG00000017199	PABPC4L	86	87.534	ENSCHIG00000007231	PABPC4L	99	87.534	Capra_hircus
ENSANAG00000017199	PABPC4L	85	80.000	ENSCAPG00000000555	PABPC4L	100	80.000	Cavia_aperea
ENSANAG00000017199	PABPC4L	87	77.297	ENSCPOG00000033167	PABPC4L	100	77.297	Cavia_porcellus
ENSANAG00000017199	PABPC4L	100	98.364	ENSCCAG00000031681	PABPC4L	100	98.364	Cebus_capucinus
ENSANAG00000017199	PABPC4L	87	81.892	ENSCLAG00000017628	PABPC4L	100	81.892	Chinchilla_lanigera
ENSANAG00000017199	PABPC4L	87	94.595	ENSCANG00000037677	PABPC4L	100	94.595	Colobus_angolensis_palliatus
ENSANAG00000017199	PABPC4L	87	82.162	ENSCGRG00001002070	Pabpc4l	100	82.162	Cricetulus_griseus_chok1gshd
ENSANAG00000017199	PABPC4L	87	82.162	ENSCGRG00000020086	Pabpc4l	100	82.162	Cricetulus_griseus_crigri
ENSANAG00000017199	PABPC4L	91	87.629	ENSDNOG00000031077	PABPC4L	100	87.629	Dasypus_novemcinctus
ENSANAG00000017199	PABPC4L	86	86.992	ENSEASG00005007883	PABPC4L	99	86.992	Equus_asinus_asinus
ENSANAG00000017199	PABPC4L	86	87.263	ENSECAG00000031416	PABPC4L	99	87.263	Equus_caballus
ENSANAG00000017199	PABPC4L	86	87.805	ENSFCAG00000028270	PABPC4L	99	87.805	Felis_catus
ENSANAG00000017199	PABPC4L	86	83.198	ENSFDAG00000019606	PABPC4L	99	83.198	Fukomys_damarensis
ENSANAG00000017199	PABPC4L	87	96.486	ENSGGOG00000024991	PABPC4L	100	96.486	Gorilla_gorilla
ENSANAG00000017199	PABPC4L	86	83.469	ENSHGLG00000020104	PABPC4L	99	83.469	Heterocephalus_glaber_female
ENSANAG00000017199	PABPC4L	86	83.469	ENSHGLG00100020648	PABPC4L	99	83.469	Heterocephalus_glaber_male
ENSANAG00000017199	PABPC4L	88	85.984	ENSSTOG00000019472	PABPC4L	99	85.984	Ictidomys_tridecemlineatus
ENSANAG00000017199	PABPC4L	86	81.843	ENSJJAG00000004090	Pabpc4l	99	81.843	Jaculus_jaculus
ENSANAG00000017199	PABPC4L	87	82.432	ENSMAUG00000016313	Pabpc4l	100	82.432	Mesocricetus_auratus
ENSANAG00000017199	PABPC4L	87	92.432	ENSMICG00000029683	PABPC4L	100	92.432	Microcebus_murinus
ENSANAG00000017199	PABPC4L	87	83.514	ENSMOCG00000007551	Pabpc4l	100	83.514	Microtus_ochrogaster
ENSANAG00000017199	PABPC4L	87	80.270	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	82.000	Mus_caroli
ENSANAG00000017199	PABPC4L	87	80.541	ENSMUSG00000090919	Pabpc4l	100	82.000	Mus_musculus
ENSANAG00000017199	PABPC4L	87	80.811	MGP_PahariEiJ_G0026409	Pabpc4l	100	80.814	Mus_pahari
ENSANAG00000017199	PABPC4L	87	80.000	MGP_SPRETEiJ_G0025903	Pabpc4l	100	82.000	Mus_spretus
ENSANAG00000017199	PABPC4L	86	78.862	ENSMLUG00000008254	PABPC4L	99	78.862	Myotis_lucifugus
ENSANAG00000017199	PABPC4L	87	86.757	ENSNGAG00000001502	Pabpc4l	100	86.757	Nannospalax_galili
ENSANAG00000017199	PABPC4L	87	96.486	ENSNLEG00000019300	PABPC4L	100	96.486	Nomascus_leucogenys
ENSANAG00000017199	PABPC4L	87	84.865	ENSOGAG00000026166	PABPC4L	100	84.865	Otolemur_garnettii
ENSANAG00000017199	PABPC4L	87	96.594	ENSPPAG00000043745	PABPC4L	93	96.594	Pan_paniscus
ENSANAG00000017199	PABPC4L	86	87.263	ENSPPRG00000018628	PABPC4L	99	87.263	Panthera_pardus
ENSANAG00000017199	PABPC4L	86	87.805	ENSPTIG00000010106	PABPC4L	99	87.805	Panthera_tigris_altaica
ENSANAG00000017199	PABPC4L	99	93.963	ENSPTRG00000045513	-	89	93.963	Pan_troglodytes
ENSANAG00000017199	PABPC4L	87	82.432	ENSPEMG00000012565	Pabpc4l	100	82.432	Peromyscus_maniculatus_bairdii
ENSANAG00000017199	PABPC4L	87	92.432	ENSPCOG00000025578	PABPC4L	100	92.432	Propithecus_coquereli
ENSANAG00000017199	PABPC4L	87	81.081	ENSRNOG00000029749	Pabpc4l	100	81.081	Rattus_norvegicus
ENSANAG00000017199	PABPC4L	87	93.784	ENSRBIG00000030229	PABPC4L	100	93.784	Rhinopithecus_bieti
ENSANAG00000017199	PABPC4L	87	93.514	ENSRROG00000020367	PABPC4L	100	93.514	Rhinopithecus_roxellana
ENSANAG00000017199	PABPC4L	87	97.027	ENSSBOG00000016382	PABPC4L	100	97.027	Saimiri_boliviensis_boliviensis
ENSANAG00000017199	PABPC4L	87	81.301	ENSSSCG00000009067	PABPC4L	99	81.301	Sus_scrofa
ENSANAG00000017199	PABPC4L	86	87.534	ENSUAMG00000001289	PABPC4L	99	87.534	Ursus_americanus
ENSANAG00000017199	PABPC4L	86	87.534	ENSUMAG00000014887	PABPC4L	99	87.534	Ursus_maritimus
ENSANAG00000017199	PABPC4L	75	76.074	ENSVVUG00000011060	-	74	76.074	Vulpes_vulpes