EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000018191 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tRNA-splicing ligase RtcB homolog pseudogene
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 1657 bases
Position: chrKZ195588.1:16075558-16077214
Accession: 105724801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000002447	RtcB	PF01139.17	1.1e-109	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000019444	-	1575	-	ENSANAP00000002447	524 (aa)	-	A0A2K5C184

Gene Model

Click here to download ENSANAG00000018191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000018191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000018191	-	69	88.889	ENSANAG00000023724	-	100	60.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000018191	-	91	83.960	ENSG00000100220	RTCB	100	83.960	Homo_sapiens
ENSANAG00000018191	-	91	79.604	ENSAPOG00000006040	rtcb	100	79.604	Acanthochromis_polyacanthus
ENSANAG00000018191	-	91	83.762	ENSAMEG00000016152	RTCB	100	83.762	Ailuropoda_melanoleuca
ENSANAG00000018191	-	91	75.446	ENSACIG00000009083	rtcb	100	75.446	Amphilophus_citrinellus
ENSANAG00000018191	-	91	79.802	ENSAOCG00000005662	rtcb	100	80.435	Amphiprion_ocellaris
ENSANAG00000018191	-	88	75.565	ENSAPEG00000024653	rtcb	100	75.565	Amphiprion_percula
ENSANAG00000018191	-	91	79.802	ENSAPEG00000024701	rtcb	100	79.802	Amphiprion_percula
ENSANAG00000018191	-	91	79.604	ENSATEG00000000618	rtcb	100	79.604	Anabas_testudineus
ENSANAG00000018191	-	91	78.420	ENSACAG00000014817	RTCB	100	78.420	Anolis_carolinensis
ENSANAG00000018191	-	91	79.406	ENSACLG00000008367	rtcb	100	79.783	Astatotilapia_calliptera
ENSANAG00000018191	-	91	79.406	ENSAMXG00000042320	rtcb	100	79.406	Astyanax_mexicanus
ENSANAG00000018191	-	91	83.564	ENSBTAG00000011070	RTCB	100	83.564	Bos_taurus
ENSANAG00000018191	-	91	62.178	WBGene00008877	rtcb-1	100	62.178	Caenorhabditis_elegans
ENSANAG00000018191	-	91	83.960	ENSCJAG00000006128	RTCB	100	83.960	Callithrix_jacchus
ENSANAG00000018191	-	91	80.792	ENSCAFG00000010789	-	100	80.792	Canis_familiaris
ENSANAG00000018191	-	91	83.762	ENSCAFG00000001785	RTCB	100	83.762	Canis_familiaris
ENSANAG00000018191	-	91	83.762	ENSCAFG00020004890	-	100	83.762	Canis_lupus_dingo
ENSANAG00000018191	-	79	80.866	ENSCAFG00020018953	-	99	80.866	Canis_lupus_dingo
ENSANAG00000018191	-	91	83.762	ENSCHIG00000027009	-	100	83.762	Capra_hircus
ENSANAG00000018191	-	91	83.564	ENSTSYG00000012320	RTCB	100	83.564	Carlito_syrichta
ENSANAG00000018191	-	86	83.438	ENSCAPG00000011647	RTCB	96	83.438	Cavia_aperea
ENSANAG00000018191	-	91	83.960	ENSCCAG00000000618	RTCB	100	83.960	Cebus_capucinus
ENSANAG00000018191	-	91	83.564	ENSCATG00000033424	RTCB	100	83.564	Cercocebus_atys
ENSANAG00000018191	-	91	83.366	ENSCLAG00000007997	RTCB	100	83.366	Chinchilla_lanigera
ENSANAG00000018191	-	91	83.762	ENSCSAG00000008351	RTCB	100	83.762	Chlorocebus_sabaeus
ENSANAG00000018191	-	91	70.495	ENSCHOG00000009123	RTCB	100	70.495	Choloepus_hoffmanni
ENSANAG00000018191	-	91	80.990	ENSCPBG00000023184	RTCB	100	80.990	Chrysemys_picta_bellii
ENSANAG00000018191	-	91	68.911	ENSCING00000003830	-	100	68.911	Ciona_intestinalis
ENSANAG00000018191	-	91	69.307	ENSCSAVG00000008124	-	99	69.307	Ciona_savignyi
ENSANAG00000018191	-	91	80.198	ENSCANG00000001891	RTCB	100	80.198	Colobus_angolensis_palliatus
ENSANAG00000018191	-	91	83.564	ENSCGRG00001011173	Rtcb	100	83.564	Cricetulus_griseus_chok1gshd
ENSANAG00000018191	-	85	83.864	ENSCGRG00000009587	-	96	83.864	Cricetulus_griseus_crigri
ENSANAG00000018191	-	91	79.406	ENSCSEG00000003986	rtcb	100	79.406	Cynoglossus_semilaevis
ENSANAG00000018191	-	74	77.644	ENSCVAG00000000569	rtcb	95	77.644	Cyprinodon_variegatus
ENSANAG00000018191	-	91	79.010	ENSDARG00000101047	rtcb	100	79.010	Danio_rerio
ENSANAG00000018191	-	72	87.047	ENSDNOG00000012425	RTCB	95	87.047	Dasypus_novemcinctus
ENSANAG00000018191	-	91	83.366	ENSDORG00000010855	Rtcb	100	83.366	Dipodomys_ordii
ENSANAG00000018191	-	90	72.255	FBgn0032781	RtcB	99	72.255	Drosophila_melanogaster
ENSANAG00000018191	-	91	79.406	ENSETEG00000001988	RTCB	100	79.406	Echinops_telfairi
ENSANAG00000018191	-	91	76.907	ENSEBUG00000014235	rtcb	100	76.907	Eptatretus_burgeri
ENSANAG00000018191	-	91	83.762	ENSEASG00005019059	RTCB	100	83.762	Equus_asinus_asinus
ENSANAG00000018191	-	91	83.762	ENSECAG00000023998	RTCB	100	83.762	Equus_caballus
ENSANAG00000018191	-	80	74.944	ENSEEUG00000006251	RTCB	100	74.944	Erinaceus_europaeus
ENSANAG00000018191	-	91	71.820	ENSELUG00000009275	rtcb	100	71.820	Esox_lucius
ENSANAG00000018191	-	91	83.960	ENSFCAG00000026480	RTCB	100	83.960	Felis_catus
ENSANAG00000018191	-	91	81.782	ENSFALG00000013334	RTCB	100	81.782	Ficedula_albicollis
ENSANAG00000018191	-	91	83.762	ENSFDAG00000018150	RTCB	100	83.762	Fukomys_damarensis
ENSANAG00000018191	-	91	80.198	ENSFHEG00000009595	rtcb	100	80.198	Fundulus_heteroclitus
ENSANAG00000018191	-	91	77.624	ENSGMOG00000018882	rtcb	100	77.624	Gadus_morhua
ENSANAG00000018191	-	91	81.584	ENSGALG00000012611	RTCB	100	81.584	Gallus_gallus
ENSANAG00000018191	-	91	80.198	ENSGAFG00000004198	rtcb	100	80.198	Gambusia_affinis
ENSANAG00000018191	-	91	78.812	ENSGACG00000000586	rtcb	100	78.812	Gasterosteus_aculeatus
ENSANAG00000018191	-	85	80.213	ENSGAGG00000019133	RTCB	98	80.213	Gopherus_agassizii
ENSANAG00000018191	-	91	83.960	ENSGGOG00000011402	RTCB	100	83.960	Gorilla_gorilla
ENSANAG00000018191	-	91	79.406	ENSHBUG00000020571	rtcb	100	79.406	Haplochromis_burtoni
ENSANAG00000018191	-	84	67.117	ENSHGLG00000001066	-	99	67.117	Heterocephalus_glaber_female
ENSANAG00000018191	-	91	83.762	ENSHGLG00000004492	RTCB	100	83.762	Heterocephalus_glaber_female
ENSANAG00000018191	-	91	83.762	ENSHGLG00100008965	RTCB	100	83.762	Heterocephalus_glaber_male
ENSANAG00000018191	-	91	76.529	ENSHCOG00000006450	rtcb	100	76.529	Hippocampus_comes
ENSANAG00000018191	-	91	80.000	ENSIPUG00000015443	rtcb	100	80.000	Ictalurus_punctatus
ENSANAG00000018191	-	91	83.762	ENSSTOG00000003878	RTCB	100	83.762	Ictidomys_tridecemlineatus
ENSANAG00000018191	-	91	82.970	ENSJJAG00000010667	Rtcb	100	82.970	Jaculus_jaculus
ENSANAG00000018191	-	91	79.406	ENSKMAG00000013178	rtcb	100	79.406	Kryptolebias_marmoratus
ENSANAG00000018191	-	91	79.802	ENSLBEG00000010566	RTCB	100	79.802	Labrus_bergylta
ENSANAG00000018191	-	91	79.010	ENSLBEG00000000214	rtcb	100	79.010	Labrus_bergylta
ENSANAG00000018191	-	91	80.000	ENSLACG00000013033	RTCB	100	80.000	Latimeria_chalumnae
ENSANAG00000018191	-	91	79.604	ENSLOCG00000016515	rtcb	99	79.604	Lepisosteus_oculatus
ENSANAG00000018191	-	91	83.168	ENSLAFG00000002082	RTCB	100	83.168	Loxodonta_africana
ENSANAG00000018191	-	91	83.762	ENSMFAG00000034419	RTCB	100	83.762	Macaca_fascicularis
ENSANAG00000018191	-	91	83.762	ENSMMUG00000006720	RTCB	100	83.762	Macaca_mulatta
ENSANAG00000018191	-	91	83.762	ENSMNEG00000040669	RTCB	100	83.762	Macaca_nemestrina
ENSANAG00000018191	-	91	83.564	ENSMLEG00000040505	RTCB	100	83.564	Mandrillus_leucophaeus
ENSANAG00000018191	-	91	79.406	ENSMAMG00000020676	rtcb	100	79.406	Mastacembelus_armatus
ENSANAG00000018191	-	91	79.406	ENSMZEG00005018942	rtcb	100	79.406	Maylandia_zebra
ENSANAG00000018191	-	91	81.262	ENSMGAG00000012805	RTCB	100	81.262	Meleagris_gallopavo
ENSANAG00000018191	-	56	86.275	ENSMAUG00000008301	Rtcb	100	86.275	Mesocricetus_auratus
ENSANAG00000018191	-	91	69.293	ENSMICG00000036677	-	98	71.193	Microcebus_murinus
ENSANAG00000018191	-	91	84.158	ENSMICG00000013303	-	100	84.158	Microcebus_murinus
ENSANAG00000018191	-	91	83.366	ENSMOCG00000002440	Rtcb	100	83.366	Microtus_ochrogaster
ENSANAG00000018191	-	91	79.604	ENSMMOG00000005987	rtcb	100	79.604	Mola_mola
ENSANAG00000018191	-	91	82.376	ENSMODG00000001414	RTCB	100	82.376	Monodelphis_domestica
ENSANAG00000018191	-	91	79.802	ENSMALG00000007603	rtcb	100	79.802	Monopterus_albus
ENSANAG00000018191	-	91	83.762	MGP_CAROLIEiJ_G0015689	Rtcb	100	83.762	Mus_caroli
ENSANAG00000018191	-	91	83.762	ENSMUSG00000001783	Rtcb	100	83.762	Mus_musculus
ENSANAG00000018191	-	91	83.762	MGP_PahariEiJ_G0031396	Rtcb	100	83.762	Mus_pahari
ENSANAG00000018191	-	91	83.762	MGP_SPRETEiJ_G0016507	Rtcb	100	83.762	Mus_spretus
ENSANAG00000018191	-	91	83.762	ENSMPUG00000012285	RTCB	100	83.762	Mustela_putorius_furo
ENSANAG00000018191	-	91	81.460	ENSMLUG00000007803	RTCB	100	81.460	Myotis_lucifugus
ENSANAG00000018191	-	78	89.333	ENSNGAG00000005093	Rtcb	100	89.333	Nannospalax_galili
ENSANAG00000018191	-	91	79.604	ENSNBRG00000017202	rtcb	100	79.604	Neolamprologus_brichardi
ENSANAG00000018191	-	91	83.960	ENSNLEG00000004960	RTCB	100	83.960	Nomascus_leucogenys
ENSANAG00000018191	-	81	86.275	ENSMEUG00000007809	-	86	86.275	Notamacropus_eugenii
ENSANAG00000018191	-	69	87.500	ENSOPRG00000003488	RTCB	78	87.500	Ochotona_princeps
ENSANAG00000018191	-	91	55.446	ENSODEG00000005042	-	100	55.446	Octodon_degus
ENSANAG00000018191	-	80	79.870	ENSODEG00000013033	-	100	79.870	Octodon_degus
ENSANAG00000018191	-	91	80.198	ENSONIG00000007474	rtcb	100	80.198	Oreochromis_niloticus
ENSANAG00000018191	-	91	82.772	ENSOANG00000005524	RTCB	100	82.772	Ornithorhynchus_anatinus
ENSANAG00000018191	-	85	82.979	ENSOCUG00000008270	RTCB	96	82.979	Oryctolagus_cuniculus
ENSANAG00000018191	-	91	79.208	ENSORLG00000020093	rtcb	100	79.208	Oryzias_latipes
ENSANAG00000018191	-	91	79.010	ENSORLG00020003706	rtcb	100	79.010	Oryzias_latipes_hni
ENSANAG00000018191	-	91	79.208	ENSORLG00015002968	rtcb	100	79.208	Oryzias_latipes_hsok
ENSANAG00000018191	-	91	79.208	ENSOMEG00000021278	rtcb	100	79.208	Oryzias_melastigma
ENSANAG00000018191	-	91	83.762	ENSOGAG00000001425	RTCB	100	83.762	Otolemur_garnettii
ENSANAG00000018191	-	91	83.762	ENSOARG00000018008	RTCB	100	83.762	Ovis_aries
ENSANAG00000018191	-	91	83.960	ENSPPAG00000028667	RTCB	100	83.960	Pan_paniscus
ENSANAG00000018191	-	91	83.960	ENSPPRG00000004038	RTCB	100	83.960	Panthera_pardus
ENSANAG00000018191	-	85	81.474	ENSPTIG00000020499	RTCB	97	81.684	Panthera_tigris_altaica
ENSANAG00000018191	-	91	83.960	ENSPTRG00000014287	RTCB	100	83.960	Pan_troglodytes
ENSANAG00000018191	-	91	83.762	ENSPANG00000016035	RTCB	100	83.762	Papio_anubis
ENSANAG00000018191	-	91	78.416	ENSPKIG00000001881	rtcb	100	78.416	Paramormyrops_kingsleyae
ENSANAG00000018191	-	83	82.174	ENSPSIG00000011690	RTCB	100	82.174	Pelodiscus_sinensis
ENSANAG00000018191	-	91	79.010	ENSPMGG00000016672	rtcb	100	79.010	Periophthalmus_magnuspinnatus
ENSANAG00000018191	-	91	83.762	ENSPEMG00000019548	Rtcb	100	83.762	Peromyscus_maniculatus_bairdii
ENSANAG00000018191	-	91	77.030	ENSPMAG00000005657	rtcb	100	77.030	Petromyzon_marinus
ENSANAG00000018191	-	91	82.772	ENSPCIG00000009467	RTCB	100	82.772	Phascolarctos_cinereus
ENSANAG00000018191	-	91	80.594	ENSPFOG00000003058	rtcb	100	80.594	Poecilia_formosa
ENSANAG00000018191	-	91	80.594	ENSPLAG00000017663	rtcb	100	80.594	Poecilia_latipinna
ENSANAG00000018191	-	91	80.594	ENSPMEG00000006227	rtcb	100	80.594	Poecilia_mexicana
ENSANAG00000018191	-	91	80.792	ENSPREG00000018467	rtcb	100	80.792	Poecilia_reticulata
ENSANAG00000018191	-	91	83.960	ENSPPYG00000011752	RTCB	100	83.960	Pongo_abelii
ENSANAG00000018191	-	85	69.280	ENSPCAG00000013641	RTCB	100	69.280	Procavia_capensis
ENSANAG00000018191	-	91	83.960	ENSPCOG00000017243	RTCB	100	83.960	Propithecus_coquereli
ENSANAG00000018191	-	85	82.979	ENSPVAG00000002380	RTCB	100	82.979	Pteropus_vampyrus
ENSANAG00000018191	-	91	79.406	ENSPNYG00000022760	rtcb	100	79.406	Pundamilia_nyererei
ENSANAG00000018191	-	91	80.396	ENSPNAG00000009209	rtcb	100	80.396	Pygocentrus_nattereri
ENSANAG00000018191	-	91	83.762	ENSRNOG00000004813	Rtcb	100	83.762	Rattus_norvegicus
ENSANAG00000018191	-	91	75.148	ENSRBIG00000042090	RTCB	100	75.148	Rhinopithecus_bieti
ENSANAG00000018191	-	91	79.604	ENSSBOG00000020085	-	100	79.604	Saimiri_boliviensis_boliviensis
ENSANAG00000018191	-	85	83.755	ENSSHAG00000016277	RTCB	100	83.755	Sarcophilus_harrisii
ENSANAG00000018191	-	91	78.614	ENSSFOG00015000763	rtcb	100	78.614	Scleropages_formosus
ENSANAG00000018191	-	91	78.812	ENSSFOG00015011572	RTCB	100	78.812	Scleropages_formosus
ENSANAG00000018191	-	91	75.644	ENSSMAG00000005096	rtcb	100	75.644	Scophthalmus_maximus
ENSANAG00000018191	-	91	78.218	ENSSDUG00000012605	rtcb	100	78.218	Seriola_dumerili
ENSANAG00000018191	-	91	78.218	ENSSLDG00000019458	rtcb	100	78.218	Seriola_lalandi_dorsalis
ENSANAG00000018191	-	62	91.429	ENSSARG00000004799	-	70	91.429	Sorex_araneus
ENSANAG00000018191	-	91	80.792	ENSSPUG00000012814	RTCB	100	80.792	Sphenodon_punctatus
ENSANAG00000018191	-	91	79.802	ENSSPAG00000004623	rtcb	100	79.802	Stegastes_partitus
ENSANAG00000018191	-	91	83.960	ENSSSCG00000000158	RTCB	100	83.960	Sus_scrofa
ENSANAG00000018191	-	91	81.782	ENSTGUG00000010947	RTCB	99	81.782	Taeniopygia_guttata
ENSANAG00000018191	-	83	80.217	ENSTRUG00000009880	rtcb	100	83.735	Takifugu_rubripes
ENSANAG00000018191	-	91	78.218	ENSTNIG00000002484	rtcb	100	78.218	Tetraodon_nigroviridis
ENSANAG00000018191	-	91	73.861	ENSTBEG00000004418	RTCB	100	73.861	Tupaia_belangeri
ENSANAG00000018191	-	85	82.766	ENSTTRG00000006417	RTCB	100	82.766	Tursiops_truncatus
ENSANAG00000018191	-	91	83.762	ENSUAMG00000022792	RTCB	100	83.762	Ursus_americanus
ENSANAG00000018191	-	91	83.762	ENSUMAG00000017225	RTCB	100	83.762	Ursus_maritimus
ENSANAG00000018191	-	91	83.762	ENSVPAG00000005375	RTCB	100	83.762	Vicugna_pacos
ENSANAG00000018191	-	91	83.762	ENSVVUG00000023408	RTCB	100	83.762	Vulpes_vulpes
ENSANAG00000018191	-	91	79.802	ENSXETG00000011523	rtcb	100	79.802	Xenopus_tropicalis
ENSANAG00000018191	-	91	80.594	ENSXMAG00000002855	rtcb	100	80.594	Xiphophorus_maculatus