EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSANAG00000018626 (Gene tree)
Gene ID
105731518
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Aotus_nancymaae
Status
putative
Strand
Minus strand
Length
12948 bases
Position
chrKZ202902.1:132307-145254
Accession
105731518
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSANAP00000002555RRM_1PF00076.223.9e-4312
ENSANAP00000002555RRM_1PF00076.223.9e-4322
ENSANAP00000002616RRM_1PF00076.224e-4312
ENSANAP00000002616RRM_1PF00076.224e-4322
ENSANAP00000002676RRM_1PF00076.224.4e-4312
ENSANAP00000002676RRM_1PF00076.224.4e-4322
ENSANAP00000002655RRM_1PF00076.224.4e-4312
ENSANAP00000002655RRM_1PF00076.224.4e-4322
ENSANAP00000002552RRM_1PF00076.224.5e-4312
ENSANAP00000002552RRM_1PF00076.224.5e-4322
ENSANAP00000002638RRM_1PF00076.225e-4312
ENSANAP00000002638RRM_1PF00076.225e-4322
ENSANAP00000002595RRM_1PF00076.226.8e-4312
ENSANAP00000002595RRM_1PF00076.226.8e-4322
ENSANAP00000002670RRM_1PF00076.229e-4312
ENSANAP00000002670RRM_1PF00076.229e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSANAT00000020060PUF60-2071860-ENSANAP00000002670619 (aa)-A0A2K5C1T8
ENSANAT00000020075PUF60-2081587-ENSANAP00000002676528 (aa)-A0A2K5C1V7
ENSANAT00000019792PUF60-2011876XM_012473313ENSANAP00000002552530 (aa)XP_012328736A0A2K5C1J1
ENSANAT00000019946PUF60-2041901-ENSANAP00000002616516 (aa)-A0A2K5C1Q0
ENSANAT00000019909PUF60-2032032-ENSANAP00000002595571 (aa)-A0A2K5C1L0
ENSANAT00000019985PUF60-2051692XM_012473310ENSANAP00000002638563 (aa)XP_012328733A0A2K5C1Q3
ENSANAT00000020023PUF60-2061683-ENSANAP00000002655560 (aa)-A0A2K5C1S2
ENSANAT00000019805PUF60-2021825XM_012473314ENSANAP00000002555513 (aa)XP_012328737A0A2K5C1H3
Gene Model
Click here to download ENSANAG00000018626's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000018626's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSANAG00000018626PUF605932.432ENSANAG00000030590CELF37832.979
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSANAG00000018626PUF6010099.623ENSG00000179950PUF6010099.623Homo_sapiens
ENSANAG00000018626PUF6010085.988ENSAPOG00000001713puf60b9985.227Acanthochromis_polyacanthus
ENSANAG00000018626PUF6010097.481ENSAMEG00000006406PUF609996.263Ailuropoda_melanoleuca
ENSANAG00000018626PUF6010085.221ENSACIG00000021705puf60b10085.221Amphilophus_citrinellus
ENSANAG00000018626PUF6010077.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSANAG00000018626PUF6010085.988ENSAOCG00000005395puf60b10085.988Amphiprion_ocellaris
ENSANAG00000018626PUF6010081.731ENSAOCG00000015558-10081.086Amphiprion_ocellaris
ENSANAG00000018626PUF6010072.361ENSAPEG00000001836-9976.275Amphiprion_percula
ENSANAG00000018626PUF6010080.422ENSAPEG00000011923puf60b9982.353Amphiprion_percula
ENSANAG00000018626PUF6010085.797ENSATEG00000001730puf60b9985.038Anabas_testudineus
ENSANAG00000018626PUF6010081.696ENSATEG00000006303-9981.524Anabas_testudineus
ENSANAG00000018626PUF6010098.256ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSANAG00000018626PUF6010096.917ENSACAG00000001645PUF609896.023Anolis_carolinensis
ENSANAG00000018626PUF6010085.221ENSACLG00000004462puf60b10085.221Astatotilapia_calliptera
ENSANAG00000018626PUF6010076.449ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSANAG00000018626PUF6010084.746ENSAMXG00000036570puf60a9784.736Astyanax_mexicanus
ENSANAG00000018626PUF6010099.245ENSBTAG00000037493PUF6010099.245Bos_taurus
ENSANAG00000018626PUF608250.162WBGene00004389rnp-68650.962Caenorhabditis_elegans
ENSANAG00000018626PUF6010099.811ENSCJAG00000021485PUF6010099.811Callithrix_jacchus
ENSANAG00000018626PUF6010099.225ENSCAFG00000001400PUF609997.687Canis_familiaris
ENSANAG00000018626PUF6010099.623ENSCAFG00020018754PUF6010099.623Canis_lupus_dingo
ENSANAG00000018626PUF6010099.225ENSCHIG00000001618PUF609298.378Capra_hircus
ENSANAG00000018626PUF6010099.612ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSANAG00000018626PUF6010093.462ENSCPOG00000014613PUF609992.692Cavia_porcellus
ENSANAG00000018626PUF6010099.645ENSCCAG00000007744PUF6010099.645Cebus_capucinus
ENSANAG00000018626PUF6010099.623ENSCATG00000035405PUF6010099.623Cercocebus_atys
ENSANAG00000018626PUF6010099.419ENSCLAG00000009154PUF6010099.291Chinchilla_lanigera
ENSANAG00000018626PUF6010099.612ENSCSAG00000008878PUF6010099.612Chlorocebus_sabaeus
ENSANAG00000018626PUF6010098.256ENSCPBG00000005595PUF609997.901Chrysemys_picta_bellii
ENSANAG00000018626PUF6010048.803ENSCING00000008436-10048.790Ciona_intestinalis
ENSANAG00000018626PUF606163.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSANAG00000018626PUF609755.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSANAG00000018626PUF609749.802ENSCSAVG00000004765-9750.617Ciona_savignyi
ENSANAG00000018626PUF608199.760ENSCANG00000041843PUF6010099.760Colobus_angolensis_palliatus
ENSANAG00000018626PUF6010098.837ENSCGRG00001017442Puf6010098.582Cricetulus_griseus_chok1gshd
ENSANAG00000018626PUF6010098.837ENSCGRG00000003717Puf609997.662Cricetulus_griseus_crigri
ENSANAG00000018626PUF609973.603ENSCSEG00000014845-9671.020Cynoglossus_semilaevis
ENSANAG00000018626PUF6010085.029ENSCSEG00000019887puf60b9384.250Cynoglossus_semilaevis
ENSANAG00000018626PUF609179.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSANAG00000018626PUF6010084.453ENSCVAG00000009386puf60b10085.605Cyprinodon_variegatus
ENSANAG00000018626PUF6010078.759ENSDARG00000001241puf60b9996.032Danio_rerio
ENSANAG00000018626PUF6010086.957ENSDARG00000032175puf60a9994.043Danio_rerio
ENSANAG00000018626PUF609883.826ENSDNOG00000043278PUF6010079.433Dasypus_novemcinctus
ENSANAG00000018626PUF6010099.225ENSDORG00000004585Puf6010098.559Dipodomys_ordii
ENSANAG00000018626PUF609551.150FBgn0028577hfp9949.733Drosophila_melanogaster
ENSANAG00000018626PUF6010061.017ENSEBUG00000014291puf60b8465.909Eptatretus_burgeri
ENSANAG00000018626PUF609870.238ENSEBUG00000005470-8872.428Eptatretus_burgeri
ENSANAG00000018626PUF6010099.623ENSEASG00005009695PUF6010099.623Equus_asinus_asinus
ENSANAG00000018626PUF6010099.612ENSECAG00000024681PUF609999.279Equus_caballus
ENSANAG00000018626PUF6010085.878ENSELUG00000018443-9985.799Esox_lucius
ENSANAG00000018626PUF6010083.846ENSELUG00000006507puf60b9980.183Esox_lucius
ENSANAG00000018626PUF6010099.245ENSFCAG00000001045PUF6010099.245Felis_catus
ENSANAG00000018626PUF6010085.853ENSFALG00000001136PUF609987.048Ficedula_albicollis
ENSANAG00000018626PUF6010099.225ENSFDAG00000017177PUF6010098.936Fukomys_damarensis
ENSANAG00000018626PUF609679.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSANAG00000018626PUF6010084.645ENSFHEG00000020046puf60b10085.797Fundulus_heteroclitus
ENSANAG00000018626PUF6010071.673ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSANAG00000018626PUF606798.256ENSGALG00000039901PUF609498.256Gallus_gallus
ENSANAG00000018626PUF6010079.537ENSGAFG00000004334-9979.042Gambusia_affinis
ENSANAG00000018626PUF6010084.069ENSGAFG00000021040puf60b10085.221Gambusia_affinis
ENSANAG00000018626PUF6010070.793ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSANAG00000018626PUF6010073.614ENSGACG00000004717puf60b10072.336Gasterosteus_aculeatus
ENSANAG00000018626PUF6010098.256ENSGAGG00000013289PUF609695.580Gopherus_agassizii
ENSANAG00000018626PUF6010099.623ENSGGOG00000004646PUF6010099.623Gorilla_gorilla
ENSANAG00000018626PUF6010082.534ENSHBUG00000009634-10082.738Haplochromis_burtoni
ENSANAG00000018626PUF6010085.221ENSHBUG00000015118puf60b10085.221Haplochromis_burtoni
ENSANAG00000018626PUF6010099.225ENSHGLG00000006111PUF6010098.936Heterocephalus_glaber_female
ENSANAG00000018626PUF6010099.225ENSHGLG00100012362PUF6010098.936Heterocephalus_glaber_male
ENSANAG00000018626PUF609866.798ENSHCOG00000000378-9965.038Hippocampus_comes
ENSANAG00000018626PUF6010082.070ENSHCOG00000015541puf60b10081.365Hippocampus_comes
ENSANAG00000018626PUF6010082.231ENSIPUG00000002453puf60a9982.609Ictalurus_punctatus
ENSANAG00000018626PUF6010078.571ENSIPUG00000004660puf60b9978.343Ictalurus_punctatus
ENSANAG00000018626PUF6010099.419ENSSTOG00000025037PUF6010098.579Ictidomys_tridecemlineatus
ENSANAG00000018626PUF6010099.031ENSJJAG00000001076Puf6010098.757Jaculus_jaculus
ENSANAG00000018626PUF6010078.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSANAG00000018626PUF6010084.645ENSKMAG00000016745puf60b10085.797Kryptolebias_marmoratus
ENSANAG00000018626PUF6010083.301ENSLBEG00000012505puf60b10083.301Labrus_bergylta
ENSANAG00000018626PUF607190.710ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSANAG00000018626PUF6010091.329ENSLOCG00000010106puf60b10088.743Lepisosteus_oculatus
ENSANAG00000018626PUF6010098.062ENSLAFG00000022929PUF6010095.374Loxodonta_africana
ENSANAG00000018626PUF6010099.623ENSMFAG00000043373PUF6010099.623Macaca_fascicularis
ENSANAG00000018626PUF6010099.623ENSMMUG00000013558PUF6010099.623Macaca_mulatta
ENSANAG00000018626PUF6010099.623ENSMNEG00000031099PUF6010099.623Macaca_nemestrina
ENSANAG00000018626PUF6010099.612ENSMLEG00000040009PUF6010099.612Mandrillus_leucophaeus
ENSANAG00000018626PUF6010085.605ENSMAMG00000010394puf60b10083.364Mastacembelus_armatus
ENSANAG00000018626PUF6010083.301ENSMAMG00000019476-9982.163Mastacembelus_armatus
ENSANAG00000018626PUF6010082.726ENSMZEG00005019425-9981.973Maylandia_zebra
ENSANAG00000018626PUF6010085.221ENSMZEG00005018515puf60b10085.221Maylandia_zebra
ENSANAG00000018626PUF6010098.256ENSMGAG00000013070PUF609997.714Meleagris_gallopavo
ENSANAG00000018626PUF607298.775ENSMAUG00000014267-10098.775Mesocricetus_auratus
ENSANAG00000018626PUF6010078.958ENSMAUG00000018549-10078.958Mesocricetus_auratus
ENSANAG00000018626PUF6010099.623ENSMICG00000012226PUF6010099.623Microcebus_murinus
ENSANAG00000018626PUF6010099.031ENSMOCG00000018780Puf6010098.759Microtus_ochrogaster
ENSANAG00000018626PUF6010073.308ENSMMOG00000018059-9976.484Mola_mola
ENSANAG00000018626PUF6010085.413ENSMMOG00000004217puf60b10085.413Mola_mola
ENSANAG00000018626PUF6010098.837ENSMODG00000009161PUF6010096.448Monodelphis_domestica
ENSANAG00000018626PUF6010081.382ENSMALG00000000200-9979.245Monopterus_albus
ENSANAG00000018626PUF6010078.119ENSMALG00000006797puf60b9977.462Monopterus_albus
ENSANAG00000018626PUF6010098.837MGP_CAROLIEiJ_G0019910Puf6010098.582Mus_caroli
ENSANAG00000018626PUF6010098.837ENSMUSG00000002524Puf6010098.582Mus_musculus
ENSANAG00000018626PUF6010098.837MGP_PahariEiJ_G0019920Puf6010098.582Mus_pahari
ENSANAG00000018626PUF6010098.837MGP_SPRETEiJ_G0020812Puf6010098.582Mus_spretus
ENSANAG00000018626PUF6010099.225ENSMPUG00000008137PUF609798.198Mustela_putorius_furo
ENSANAG00000018626PUF6010094.542ENSMLUG00000013032-10094.542Myotis_lucifugus
ENSANAG00000018626PUF6010098.450ENSMLUG00000000238-9897.658Myotis_lucifugus
ENSANAG00000018626PUF6010099.031ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSANAG00000018626PUF608382.805ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSANAG00000018626PUF6010082.917ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSANAG00000018626PUF6010099.612ENSNLEG00000002156PUF6010099.610Nomascus_leucogenys
ENSANAG00000018626PUF607599.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSANAG00000018626PUF609873.767ENSODEG00000015513-9971.132Octodon_degus
ENSANAG00000018626PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSANAG00000018626PUF6010085.221ENSONIG00000006247puf60b9984.470Oreochromis_niloticus
ENSANAG00000018626PUF6010082.917ENSONIG00000014030-9982.197Oreochromis_niloticus
ENSANAG00000018626PUF609778.320ENSOANG00000006962PUF609978.474Ornithorhynchus_anatinus
ENSANAG00000018626PUF6010085.029ENSORLG00000012279puf60b10084.645Oryzias_latipes
ENSANAG00000018626PUF609978.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSANAG00000018626PUF6010085.029ENSORLG00020007333puf6010084.645Oryzias_latipes_hni
ENSANAG00000018626PUF609979.198ENSORLG00020018144-9978.049Oryzias_latipes_hni
ENSANAG00000018626PUF6010084.130ENSORLG00015007718puf60b10084.512Oryzias_latipes_hsok
ENSANAG00000018626PUF609979.198ENSORLG00015016833-9978.172Oryzias_latipes_hsok
ENSANAG00000018626PUF609980.230ENSOMEG00000022185-9978.947Oryzias_melastigma
ENSANAG00000018626PUF6010082.707ENSOMEG00000001643puf60b9982.828Oryzias_melastigma
ENSANAG00000018626PUF6010099.419ENSOGAG00000006259PUF6010096.786Otolemur_garnettii
ENSANAG00000018626PUF6010096.705ENSOARG00000016235PUF609996.750Ovis_aries
ENSANAG00000018626PUF6010099.623ENSPPAG00000029933PUF6010099.623Pan_paniscus
ENSANAG00000018626PUF6010099.245ENSPPRG00000003257PUF6010099.245Panthera_pardus
ENSANAG00000018626PUF609899.010ENSPTIG00000009795PUF609996.935Panthera_tigris_altaica
ENSANAG00000018626PUF6010099.419ENSPTRG00000043963-9999.051Pan_troglodytes
ENSANAG00000018626PUF6010099.434ENSPTRG00000020670PUF6010099.434Pan_troglodytes
ENSANAG00000018626PUF6010099.623ENSPANG00000021936PUF6010099.623Papio_anubis
ENSANAG00000018626PUF6010086.424ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSANAG00000018626PUF6010087.692ENSPKIG00000012204puf60b10087.692Paramormyrops_kingsleyae
ENSANAG00000018626PUF6010098.062ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSANAG00000018626PUF6010084.160ENSPMGG00000013444puf60b9984.160Periophthalmus_magnuspinnatus
ENSANAG00000018626PUF6010099.031ENSPEMG00000008820Puf6010098.759Peromyscus_maniculatus_bairdii
ENSANAG00000018626PUF6010099.419ENSPCIG00000020270PUF609999.232Phascolarctos_cinereus
ENSANAG00000018626PUF6010080.925ENSPFOG00000011118-9980.151Poecilia_formosa
ENSANAG00000018626PUF6010084.645ENSPFOG00000019217puf60b9984.510Poecilia_formosa
ENSANAG00000018626PUF6010084.645ENSPLAG00000010754puf60b10085.797Poecilia_latipinna
ENSANAG00000018626PUF6010080.925ENSPLAG00000017025-9379.511Poecilia_latipinna
ENSANAG00000018626PUF6010084.645ENSPMEG00000000838puf60b10085.797Poecilia_mexicana
ENSANAG00000018626PUF6010080.925ENSPMEG00000009767-9379.887Poecilia_mexicana
ENSANAG00000018626PUF6010081.869ENSPREG00000005440puf60b10083.532Poecilia_reticulata
ENSANAG00000018626PUF608198.082ENSPPYG00000018951-9598.082Pongo_abelii
ENSANAG00000018626PUF608199.520ENSPCAG00000014837PUF6010099.520Procavia_capensis
ENSANAG00000018626PUF6010099.434ENSPCOG00000027981PUF6010099.434Propithecus_coquereli
ENSANAG00000018626PUF60100100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSANAG00000018626PUF6010082.726ENSPNYG00000004273-9981.973Pundamilia_nyererei
ENSANAG00000018626PUF6010085.221ENSPNYG00000002556puf60b10085.221Pundamilia_nyererei
ENSANAG00000018626PUF609984.630ENSPNAG00000019909puf60a10084.436Pygocentrus_nattereri
ENSANAG00000018626PUF609880.079ENSPNAG00000019415puf60b9674.101Pygocentrus_nattereri
ENSANAG00000018626PUF6010098.837ENSRNOG00000009960Puf6010098.404Rattus_norvegicus
ENSANAG00000018626PUF6010099.623ENSRBIG00000035274PUF6010099.623Rhinopithecus_bieti
ENSANAG00000018626PUF6010099.623ENSRROG00000029360PUF6010099.623Rhinopithecus_roxellana
ENSANAG00000018626PUF6010098.450ENSSBOG00000027089PUF609998.479Saimiri_boliviensis_boliviensis
ENSANAG00000018626PUF609098.922ENSSHAG00000006668PUF609696.282Sarcophilus_harrisii
ENSANAG00000018626PUF609686.032ENSSFOG00015019619puf60b9986.032Scleropages_formosus
ENSANAG00000018626PUF6010081.868ENSSFOG00015019371puf60a9887.123Scleropages_formosus
ENSANAG00000018626PUF607394.224ENSSMAG00000016381puf60b7294.224Scophthalmus_maximus
ENSANAG00000018626PUF6010084.023ENSSDUG00000009935puf60b10083.117Seriola_dumerili
ENSANAG00000018626PUF609981.081ENSSDUG00000007048-9979.962Seriola_dumerili
ENSANAG00000018626PUF6010080.455ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSANAG00000018626PUF6010085.797ENSSLDG00000024011puf60b10083.551Seriola_lalandi_dorsalis
ENSANAG00000018626PUF606785.260ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSANAG00000018626PUF6010082.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSANAG00000018626PUF6010083.178ENSSPAG00000012144puf60b10083.738Stegastes_partitus
ENSANAG00000018626PUF6010099.225ENSSSCG00000038800PUF6010098.830Sus_scrofa
ENSANAG00000018626PUF6010094.961ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSANAG00000018626PUF6010077.713ENSTRUG00000008843-10080.361Takifugu_rubripes
ENSANAG00000018626PUF6010084.645ENSTRUG00000005420puf60b10082.430Takifugu_rubripes
ENSANAG00000018626PUF6010084.645ENSTNIG00000013675puf60b10083.712Tetraodon_nigroviridis
ENSANAG00000018626PUF6010078.682ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSANAG00000018626PUF608181.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSANAG00000018626PUF606295.946ENSTBEG00000002751-9995.932Tupaia_belangeri
ENSANAG00000018626PUF6010098.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSANAG00000018626PUF6010099.623ENSUAMG00000024917PUF6010099.623Ursus_americanus
ENSANAG00000018626PUF6010094.767ENSUMAG00000000272PUF6010092.679Ursus_maritimus
ENSANAG00000018626PUF6010099.612ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSANAG00000018626PUF6010094.380ENSXETG00000012469puf609994.071Xenopus_tropicalis
ENSANAG00000018626PUF6010081.382ENSXCOG00000012355puf60b10085.317Xiphophorus_couchianus
ENSANAG00000018626PUF6010078.571ENSXMAG00000010507-9880.439Xiphophorus_maculatus
ENSANAG00000018626PUF6010084.645ENSXMAG00000001862puf60b10085.797Xiphophorus_maculatus

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