EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000018759 (Gene tree)
Gene ID: 105708206
Gene Symbol: -
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chrKZ203646.1:2426780-2427151
Accession: 105708206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000002547	LSM	PF01423.22	6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000019775	-	372	XM_012439474	ENSANAP00000002547	123 (aa)	XP_012294897	A0A2K5C1I6

Gene Model

Click here to download ENSANAG00000018759's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000018759's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000018759	-	99	98.361	ENSANAG00000031489	-	100	98.361
ENSANAG00000018759	-	55	30.000	ENSANAG00000028372	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000018759	-	100	97.561	ENSG00000181817	LSM10	100	97.561	Homo_sapiens
ENSANAG00000018759	-	100	90.244	ENSAMEG00000019854	LSM10	100	90.244	Ailuropoda_melanoleuca
ENSANAG00000018759	-	95	66.667	ENSACIG00000015420	oscp1a	77	66.667	Amphilophus_citrinellus
ENSANAG00000018759	-	90	65.766	ENSAOCG00000015607	LSM10	86	65.766	Amphiprion_ocellaris
ENSANAG00000018759	-	96	67.797	ENSAOCG00000014654	-	98	67.797	Amphiprion_ocellaris
ENSANAG00000018759	-	96	67.797	ENSAOCG00000015618	LSM10	98	67.797	Amphiprion_ocellaris
ENSANAG00000018759	-	90	65.766	ENSAPEG00000021851	LSM10	86	65.766	Amphiprion_percula
ENSANAG00000018759	-	96	67.797	ENSAPEG00000021845	-	98	67.797	Amphiprion_percula
ENSANAG00000018759	-	94	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSANAG00000018759	-	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSANAG00000018759	-	96	66.102	ENSACLG00000004728	oscp1a	96	66.102	Astatotilapia_calliptera
ENSANAG00000018759	-	97	64.706	ENSAMXG00000025301	oscp1a	98	64.706	Astyanax_mexicanus
ENSANAG00000018759	-	99	91.803	ENSBTAG00000024096	LSM10	100	91.803	Bos_taurus
ENSANAG00000018759	-	100	99.187	ENSCJAG00000044880	LSM10	100	99.187	Callithrix_jacchus
ENSANAG00000018759	-	100	91.870	ENSCAFG00000003382	LSM10	100	91.870	Canis_familiaris
ENSANAG00000018759	-	100	91.870	ENSCAFG00020008920	LSM10	100	91.870	Canis_lupus_dingo
ENSANAG00000018759	-	99	91.803	ENSCHIG00000009398	LSM10	100	91.803	Capra_hircus
ENSANAG00000018759	-	100	91.057	ENSCAPG00000012567	LSM10	100	91.057	Cavia_aperea
ENSANAG00000018759	-	100	91.057	ENSCPOG00000039302	LSM10	100	91.057	Cavia_porcellus
ENSANAG00000018759	-	99	96.721	ENSCCAG00000008378	-	99	96.721	Cebus_capucinus
ENSANAG00000018759	-	100	100.000	ENSCCAG00000018913	-	100	100.000	Cebus_capucinus
ENSANAG00000018759	-	100	97.561	ENSCATG00000006589	LSM10	100	97.561	Cercocebus_atys
ENSANAG00000018759	-	100	92.683	ENSCLAG00000008633	LSM10	100	92.683	Chinchilla_lanigera
ENSANAG00000018759	-	100	97.561	ENSCSAG00000000134	LSM10	100	97.561	Chlorocebus_sabaeus
ENSANAG00000018759	-	100	92.800	ENSCHOG00000008615	LSM10	100	92.800	Choloepus_hoffmanni
ENSANAG00000018759	-	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSANAG00000018759	-	100	97.561	ENSCANG00000019928	LSM10	100	97.561	Colobus_angolensis_palliatus
ENSANAG00000018759	-	98	91.667	ENSCGRG00001004317	-	98	91.667	Cricetulus_griseus_chok1gshd
ENSANAG00000018759	-	93	81.897	ENSCGRG00001022673	-	93	81.897	Cricetulus_griseus_chok1gshd
ENSANAG00000018759	-	98	91.667	ENSCGRG00000014935	-	98	91.667	Cricetulus_griseus_crigri
ENSANAG00000018759	-	93	81.897	ENSCGRG00000015514	-	93	81.897	Cricetulus_griseus_crigri
ENSANAG00000018759	-	98	61.667	ENSCSEG00000010374	oscp1a	81	61.667	Cynoglossus_semilaevis
ENSANAG00000018759	-	98	64.167	ENSCVAG00000001536	oscp1a	91	64.167	Cyprinodon_variegatus
ENSANAG00000018759	-	69	69.412	ENSDARG00000109563	CABZ01074453.1	99	69.412	Danio_rerio
ENSANAG00000018759	-	98	70.000	ENSDARG00000101222	oscp1a	99	70.000	Danio_rerio
ENSANAG00000018759	-	98	95.868	ENSDNOG00000036662	LSM10	98	95.868	Dasypus_novemcinctus
ENSANAG00000018759	-	100	91.057	ENSDORG00000007579	Lsm10	100	91.057	Dipodomys_ordii
ENSANAG00000018759	-	85	31.193	FBgn0033554	Lsm10	77	31.193	Drosophila_melanogaster
ENSANAG00000018759	-	100	87.805	ENSETEG00000005703	LSM10	100	87.805	Echinops_telfairi
ENSANAG00000018759	-	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSANAG00000018759	-	100	91.870	ENSEASG00005012194	LSM10	100	91.870	Equus_asinus_asinus
ENSANAG00000018759	-	100	92.683	ENSECAG00000005071	LSM10	100	92.683	Equus_caballus
ENSANAG00000018759	-	100	90.244	ENSEEUG00000012032	LSM10	100	90.244	Erinaceus_europaeus
ENSANAG00000018759	-	99	67.213	ENSELUG00000007452	oscp1a	100	67.213	Esox_lucius
ENSANAG00000018759	-	100	70.732	ENSFALG00000000851	LSM10	100	70.732	Ficedula_albicollis
ENSANAG00000018759	-	100	89.431	ENSFDAG00000021056	LSM10	100	89.431	Fukomys_damarensis
ENSANAG00000018759	-	93	65.217	ENSFHEG00000001058	oscp1a	98	65.217	Fundulus_heteroclitus
ENSANAG00000018759	-	87	64.486	ENSGMOG00000019832	oscp1a	90	64.486	Gadus_morhua
ENSANAG00000018759	-	100	73.171	ENSGALG00000002127	LSM10	100	73.171	Gallus_gallus
ENSANAG00000018759	-	95	58.333	ENSGAFG00000016445	oscp1a	97	58.333	Gambusia_affinis
ENSANAG00000018759	-	96	62.712	ENSGACG00000002329	oscp1a	97	62.712	Gasterosteus_aculeatus
ENSANAG00000018759	-	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSANAG00000018759	-	100	98.374	ENSGGOG00000003556	LSM10	100	98.374	Gorilla_gorilla
ENSANAG00000018759	-	96	66.102	ENSHBUG00000001722	oscp1a	96	66.102	Haplochromis_burtoni
ENSANAG00000018759	-	100	91.870	ENSHGLG00000011625	LSM10	100	91.870	Heterocephalus_glaber_female
ENSANAG00000018759	-	100	91.870	ENSHGLG00100001769	LSM10	100	91.870	Heterocephalus_glaber_male
ENSANAG00000018759	-	85	66.667	ENSIPUG00000005808	oscp1a	91	66.667	Ictalurus_punctatus
ENSANAG00000018759	-	100	91.057	ENSSTOG00000000606	LSM10	100	91.057	Ictidomys_tridecemlineatus
ENSANAG00000018759	-	96	63.559	ENSKMAG00000012143	oscp1a	98	63.559	Kryptolebias_marmoratus
ENSANAG00000018759	-	98	62.500	ENSLBEG00000017764	oscp1a	98	62.500	Labrus_bergylta
ENSANAG00000018759	-	100	73.984	ENSLACG00000015904	LSM10	95	73.984	Latimeria_chalumnae
ENSANAG00000018759	-	98	71.667	ENSLOCG00000018277	oscp1a	98	71.667	Lepisosteus_oculatus
ENSANAG00000018759	-	100	91.870	ENSLAFG00000009600	LSM10	100	91.870	Loxodonta_africana
ENSANAG00000018759	-	100	97.561	ENSMFAG00000009115	LSM10	100	97.561	Macaca_fascicularis
ENSANAG00000018759	-	100	97.561	ENSMMUG00000017338	LSM10	100	97.561	Macaca_mulatta
ENSANAG00000018759	-	100	97.561	ENSMNEG00000020023	LSM10	100	97.561	Macaca_nemestrina
ENSANAG00000018759	-	100	97.561	ENSMLEG00000025150	LSM10	100	97.561	Mandrillus_leucophaeus
ENSANAG00000018759	-	98	65.289	ENSMAMG00000004427	oscp1a	99	65.289	Mastacembelus_armatus
ENSANAG00000018759	-	96	66.102	ENSMZEG00005026307	oscp1a	96	66.102	Maylandia_zebra
ENSANAG00000018759	-	100	71.545	ENSMGAG00000015707	LSM10	100	71.545	Meleagris_gallopavo
ENSANAG00000018759	-	98	91.667	ENSMAUG00000016624	Lsm10	98	91.667	Mesocricetus_auratus
ENSANAG00000018759	-	98	91.667	ENSMOCG00000021943	Lsm10	98	91.667	Microtus_ochrogaster
ENSANAG00000018759	-	90	66.667	ENSMMOG00000013597	oscp1a	83	66.667	Mola_mola
ENSANAG00000018759	-	100	82.114	ENSMODG00000023328	LSM10	100	82.114	Monodelphis_domestica
ENSANAG00000018759	-	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSANAG00000018759	-	98	90.833	MGP_CAROLIEiJ_G0026467	Lsm10	100	89.247	Mus_caroli
ENSANAG00000018759	-	98	91.667	ENSMUSG00000050188	Lsm10	100	90.323	Mus_musculus
ENSANAG00000018759	-	98	91.667	MGP_PahariEiJ_G0028798	Lsm10	100	90.323	Mus_pahari
ENSANAG00000018759	-	98	91.667	MGP_SPRETEiJ_G0027446	Lsm10	100	90.323	Mus_spretus
ENSANAG00000018759	-	100	91.870	ENSMPUG00000018593	LSM10	100	91.870	Mustela_putorius_furo
ENSANAG00000018759	-	100	88.618	ENSMLUG00000023895	LSM10	100	88.618	Myotis_lucifugus
ENSANAG00000018759	-	100	91.870	ENSNGAG00000015011	Lsm10	100	91.870	Nannospalax_galili
ENSANAG00000018759	-	96	66.949	ENSNBRG00000014306	oscp1a	96	66.949	Neolamprologus_brichardi
ENSANAG00000018759	-	100	97.561	ENSNLEG00000033754	LSM10	100	97.561	Nomascus_leucogenys
ENSANAG00000018759	-	100	82.114	ENSMEUG00000006313	LSM10	100	82.114	Notamacropus_eugenii
ENSANAG00000018759	-	100	91.057	ENSOPRG00000001699	LSM10	100	91.057	Ochotona_princeps
ENSANAG00000018759	-	100	92.683	ENSODEG00000019161	LSM10	100	92.683	Octodon_degus
ENSANAG00000018759	-	96	66.949	ENSONIG00000020904	oscp1a	97	66.949	Oreochromis_niloticus
ENSANAG00000018759	-	100	74.797	ENSOANG00000002066	LSM10	100	74.797	Ornithorhynchus_anatinus
ENSANAG00000018759	-	100	90.244	ENSOCUG00000005333	LSM10	100	90.244	Oryctolagus_cuniculus
ENSANAG00000018759	-	96	65.254	ENSORLG00000009504	oscp1a	98	65.254	Oryzias_latipes
ENSANAG00000018759	-	96	65.254	ENSORLG00020016201	oscp1a	98	65.254	Oryzias_latipes_hni
ENSANAG00000018759	-	96	65.254	ENSORLG00015007794	oscp1a	97	65.254	Oryzias_latipes_hsok
ENSANAG00000018759	-	100	90.244	ENSOGAG00000002653	LSM10	100	90.244	Otolemur_garnettii
ENSANAG00000018759	-	99	91.803	ENSOARG00000009596	LSM10	100	91.803	Ovis_aries
ENSANAG00000018759	-	100	97.561	ENSPPAG00000023465	LSM10	100	97.561	Pan_paniscus
ENSANAG00000018759	-	100	92.683	ENSPPRG00000014619	LSM10	100	92.683	Panthera_pardus
ENSANAG00000018759	-	100	92.683	ENSPTIG00000004613	LSM10	100	92.683	Panthera_tigris_altaica
ENSANAG00000018759	-	100	97.561	ENSPTRG00000000539	LSM10	100	97.561	Pan_troglodytes
ENSANAG00000018759	-	100	97.561	ENSPANG00000023172	LSM10	100	97.561	Papio_anubis
ENSANAG00000018759	-	100	65.041	ENSPKIG00000003728	oscp1a	99	65.041	Paramormyrops_kingsleyae
ENSANAG00000018759	-	100	71.545	ENSPSIG00000000590	LSM10	100	71.545	Pelodiscus_sinensis
ENSANAG00000018759	-	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSANAG00000018759	-	84	86.408	ENSPCIG00000014865	LSM10	76	86.408	Phascolarctos_cinereus
ENSANAG00000018759	-	91	66.071	ENSPFOG00000020490	oscp1a	95	66.071	Poecilia_formosa
ENSANAG00000018759	-	96	64.407	ENSPLAG00000016537	oscp1a	89	64.407	Poecilia_latipinna
ENSANAG00000018759	-	93	65.789	ENSPMEG00000000174	oscp1a	98	65.789	Poecilia_mexicana
ENSANAG00000018759	-	96	64.407	ENSPREG00000009899	oscp1a	89	64.407	Poecilia_reticulata
ENSANAG00000018759	-	100	98.374	ENSPPYG00000001539	LSM10	100	98.374	Pongo_abelii
ENSANAG00000018759	-	100	91.057	ENSPCAG00000002520	LSM10	100	91.057	Procavia_capensis
ENSANAG00000018759	-	100	90.244	ENSPVAG00000008644	LSM10	100	90.244	Pteropus_vampyrus
ENSANAG00000018759	-	96	66.102	ENSPNYG00000003138	oscp1a	96	66.102	Pundamilia_nyererei
ENSANAG00000018759	-	96	64.407	ENSPNAG00000028829	oscp1a	98	64.407	Pygocentrus_nattereri
ENSANAG00000018759	-	98	92.500	ENSRNOG00000025716	Lsm10	98	92.500	Rattus_norvegicus
ENSANAG00000018759	-	100	97.561	ENSRBIG00000001561	LSM10	100	97.561	Rhinopithecus_bieti
ENSANAG00000018759	-	100	97.561	ENSRROG00000011414	LSM10	100	97.561	Rhinopithecus_roxellana
ENSANAG00000018759	-	100	100.000	ENSSBOG00000036413	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000018759	-	100	81.301	ENSSHAG00000018056	LSM10	100	81.301	Sarcophilus_harrisii
ENSANAG00000018759	-	99	64.754	ENSSFOG00015019954	lsm10	100	64.754	Scleropages_formosus
ENSANAG00000018759	-	93	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSANAG00000018759	-	99	63.415	ENSSDUG00000007090	oscp1a	100	63.415	Seriola_dumerili
ENSANAG00000018759	-	96	64.407	ENSSLDG00000000800	oscp1a	98	64.407	Seriola_lalandi_dorsalis
ENSANAG00000018759	-	100	88.000	ENSSARG00000004211	LSM10	100	89.600	Sorex_araneus
ENSANAG00000018759	-	94	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSANAG00000018759	-	100	90.244	ENSSSCG00000038916	LSM10	100	90.244	Sus_scrofa
ENSANAG00000018759	-	96	73.729	ENSTGUG00000001600	-	97	73.729	Taeniopygia_guttata
ENSANAG00000018759	-	96	73.729	ENSTGUG00000001602	-	97	73.729	Taeniopygia_guttata
ENSANAG00000018759	-	98	65.000	ENSTRUG00000010531	oscp1a	97	65.000	Takifugu_rubripes
ENSANAG00000018759	-	100	95.122	ENSTBEG00000016674	LSM10	100	95.122	Tupaia_belangeri
ENSANAG00000018759	-	100	90.244	ENSUAMG00000020265	LSM10	100	90.244	Ursus_americanus
ENSANAG00000018759	-	100	90.244	ENSUMAG00000001438	LSM10	57	90.244	Ursus_maritimus
ENSANAG00000018759	-	100	91.870	ENSVVUG00000023209	LSM10	100	91.870	Vulpes_vulpes
ENSANAG00000018759	-	100	69.106	ENSXETG00000027631	lsm10	100	69.106	Xenopus_tropicalis
ENSANAG00000018759	-	98	60.833	ENSXCOG00000018776	oscp1a	75	60.833	Xiphophorus_couchianus
ENSANAG00000018759	-	92	63.717	ENSXMAG00000019963	oscp1a	90	63.717	Xiphophorus_maculatus