EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000019974 (Gene tree)
Gene ID: 105727593
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 80834 bases
Position: chrKZ200175.1:4108638-4189471
Accession: 105727593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000003963	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSANAP00000003978	DND1_DSRM	PF14709.7	1.2e-24	1	1
ENSANAP00000003963	RRM_1	PF00076.22	9.5e-40	1	3
ENSANAP00000003963	RRM_1	PF00076.22	9.5e-40	2	3
ENSANAP00000003963	RRM_1	PF00076.22	9.5e-40	3	3
ENSANAP00000003978	RRM_1	PF00076.22	1.1e-39	1	3
ENSANAP00000003978	RRM_1	PF00076.22	1.1e-39	2	3
ENSANAP00000003978	RRM_1	PF00076.22	1.1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000021692	A1CF-202	1809	-	ENSANAP00000003978	602 (aa)	-	A0A2K5C5K3
ENSANAT00000021676	A1CF-201	1946	XM_012467585	ENSANAP00000003963	586 (aa)	XP_012323008	A0A2K5C5I6

Gene Model

Click here to download ENSANAG00000019974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000019974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000019974	A1CF	93	51.002	ENSANAG00000029193	RBM46	80	73.118
ENSANAG00000019974	A1CF	74	59.955	ENSANAG00000029440	RBM47	87	68.300
ENSANAG00000019974	A1CF	53	41.456	ENSANAG00000034181	-	56	41.456
ENSANAG00000019974	A1CF	53	52.215	ENSANAG00000036315	-	53	52.215
ENSANAG00000019974	A1CF	52	52.427	ENSANAG00000020675	SYNCRIP	70	44.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000019974	A1CF	100	98.637	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSANAG00000019974	A1CF	100	74.916	ENSAPOG00000008259	a1cf	100	74.916	Acanthochromis_polyacanthus
ENSANAG00000019974	A1CF	100	94.444	ENSAMEG00000000523	A1CF	100	94.444	Ailuropoda_melanoleuca
ENSANAG00000019974	A1CF	100	76.694	ENSACIG00000008632	a1cf	100	78.017	Amphilophus_citrinellus
ENSANAG00000019974	A1CF	100	75.581	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSANAG00000019974	A1CF	100	74.426	ENSAPEG00000009537	a1cf	100	75.246	Amphiprion_percula
ENSANAG00000019974	A1CF	100	77.393	ENSATEG00000013720	a1cf	100	78.713	Anabas_testudineus
ENSANAG00000019974	A1CF	100	87.395	ENSAPLG00000002964	A1CF	100	87.395	Anas_platyrhynchos
ENSANAG00000019974	A1CF	100	84.157	ENSACAG00000015269	A1CF	100	84.157	Anolis_carolinensis
ENSANAG00000019974	A1CF	100	74.461	ENSACLG00000017428	a1cf	100	76.451	Astatotilapia_calliptera
ENSANAG00000019974	A1CF	100	73.388	ENSAMXG00000018180	a1cf	100	73.554	Astyanax_mexicanus
ENSANAG00000019974	A1CF	100	96.252	ENSBTAG00000021195	A1CF	100	96.840	Bos_taurus
ENSANAG00000019974	A1CF	100	98.316	ENSCJAG00000005045	A1CF	100	98.316	Callithrix_jacchus
ENSANAG00000019974	A1CF	100	93.603	ENSCAFG00000015581	A1CF	100	94.444	Canis_familiaris
ENSANAG00000019974	A1CF	100	93.603	ENSCAFG00020026421	A1CF	100	94.444	Canis_lupus_dingo
ENSANAG00000019974	A1CF	100	93.950	ENSCHIG00000020411	A1CF	100	94.286	Capra_hircus
ENSANAG00000019974	A1CF	100	92.691	ENSTSYG00000001755	A1CF	100	97.107	Carlito_syrichta
ENSANAG00000019974	A1CF	100	83.436	ENSCAPG00000017386	A1CF	90	95.142	Cavia_aperea
ENSANAG00000019974	A1CF	100	95.286	ENSCPOG00000009807	A1CF	100	95.286	Cavia_porcellus
ENSANAG00000019974	A1CF	100	98.671	ENSCCAG00000018168	A1CF	100	98.671	Cebus_capucinus
ENSANAG00000019974	A1CF	100	98.294	ENSCATG00000043715	A1CF	100	98.294	Cercocebus_atys
ENSANAG00000019974	A1CF	100	94.799	ENSCLAG00000010424	A1CF	100	94.799	Chinchilla_lanigera
ENSANAG00000019974	A1CF	100	97.138	ENSCSAG00000007032	A1CF	100	97.138	Chlorocebus_sabaeus
ENSANAG00000019974	A1CF	99	90.698	ENSCHOG00000009089	A1CF	99	90.713	Choloepus_hoffmanni
ENSANAG00000019974	A1CF	100	87.899	ENSCPBG00000026464	A1CF	100	87.919	Chrysemys_picta_bellii
ENSANAG00000019974	A1CF	100	97.138	ENSCANG00000038032	A1CF	100	97.138	Colobus_angolensis_palliatus
ENSANAG00000019974	A1CF	100	92.941	ENSCGRG00001017413	A1cf	100	93.109	Cricetulus_griseus_chok1gshd
ENSANAG00000019974	A1CF	100	92.101	ENSCGRG00000017332	A1cf	100	92.773	Cricetulus_griseus_crigri
ENSANAG00000019974	A1CF	100	74.129	ENSCSEG00000002361	a1cf	100	75.622	Cynoglossus_semilaevis
ENSANAG00000019974	A1CF	100	76.238	ENSCVAG00000010520	a1cf	100	77.723	Cyprinodon_variegatus
ENSANAG00000019974	A1CF	100	79.223	ENSDARG00000002968	a1cf	100	80.574	Danio_rerio
ENSANAG00000019974	A1CF	100	93.782	ENSDNOG00000002829	A1CF	100	93.782	Dasypus_novemcinctus
ENSANAG00000019974	A1CF	82	93.116	ENSETEG00000012527	A1CF	84	90.753	Echinops_telfairi
ENSANAG00000019974	A1CF	100	95.645	ENSEASG00005012924	A1CF	100	95.645	Equus_asinus_asinus
ENSANAG00000019974	A1CF	100	95.142	ENSECAG00000010424	A1CF	100	95.142	Equus_caballus
ENSANAG00000019974	A1CF	78	81.878	ENSEEUG00000000013	A1CF	100	81.878	Erinaceus_europaeus
ENSANAG00000019974	A1CF	100	77.500	ENSELUG00000003159	a1cf	100	78.333	Esox_lucius
ENSANAG00000019974	A1CF	100	94.369	ENSFCAG00000011179	A1CF	100	94.539	Felis_catus
ENSANAG00000019974	A1CF	100	87.053	ENSFALG00000013183	A1CF	100	87.053	Ficedula_albicollis
ENSANAG00000019974	A1CF	100	95.400	ENSFDAG00000019371	A1CF	100	95.400	Fukomys_damarensis
ENSANAG00000019974	A1CF	100	71.452	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSANAG00000019974	A1CF	100	71.240	ENSGMOG00000018943	a1cf	100	71.240	Gadus_morhua
ENSANAG00000019974	A1CF	99	84.060	ENSGALG00000003765	A1CF	97	86.525	Gallus_gallus
ENSANAG00000019974	A1CF	100	71.333	ENSGAFG00000014868	a1cf	100	72.333	Gambusia_affinis
ENSANAG00000019974	A1CF	100	73.355	ENSGACG00000010241	a1cf	100	74.013	Gasterosteus_aculeatus
ENSANAG00000019974	A1CF	94	88.360	ENSGAGG00000016508	A1CF	98	88.380	Gopherus_agassizii
ENSANAG00000019974	A1CF	100	97.181	ENSGGOG00000009670	A1CF	100	97.181	Gorilla_gorilla
ENSANAG00000019974	A1CF	100	75.702	ENSHBUG00000021959	a1cf	100	77.686	Haplochromis_burtoni
ENSANAG00000019974	A1CF	100	94.958	ENSHGLG00000008955	A1CF	100	94.958	Heterocephalus_glaber_female
ENSANAG00000019974	A1CF	100	93.950	ENSHGLG00100000518	A1CF	100	93.950	Heterocephalus_glaber_male
ENSANAG00000019974	A1CF	100	69.494	ENSHCOG00000017669	a1cf	100	72.313	Hippocampus_comes
ENSANAG00000019974	A1CF	89	81.716	ENSIPUG00000010367	a1cf	96	81.716	Ictalurus_punctatus
ENSANAG00000019974	A1CF	100	76.098	ENSKMAG00000006568	a1cf	100	76.911	Kryptolebias_marmoratus
ENSANAG00000019974	A1CF	99	74.837	ENSLBEG00000020994	a1cf	98	76.480	Labrus_bergylta
ENSANAG00000019974	A1CF	100	82.373	ENSLACG00000008061	A1CF	100	82.203	Latimeria_chalumnae
ENSANAG00000019974	A1CF	100	80.968	ENSLOCG00000006302	a1cf	100	80.801	Lepisosteus_oculatus
ENSANAG00000019974	A1CF	100	93.445	ENSLAFG00000015462	A1CF	100	93.445	Loxodonta_africana
ENSANAG00000019974	A1CF	100	98.464	ENSMFAG00000035948	A1CF	100	98.464	Macaca_fascicularis
ENSANAG00000019974	A1CF	100	98.464	ENSMMUG00000007077	A1CF	100	98.464	Macaca_mulatta
ENSANAG00000019974	A1CF	100	98.294	ENSMNEG00000031454	A1CF	100	98.294	Macaca_nemestrina
ENSANAG00000019974	A1CF	100	96.970	ENSMLEG00000037223	A1CF	100	96.970	Mandrillus_leucophaeus
ENSANAG00000019974	A1CF	100	74.793	ENSMAMG00000010402	a1cf	100	77.318	Mastacembelus_armatus
ENSANAG00000019974	A1CF	100	74.958	ENSMZEG00005013245	a1cf	100	75.960	Maylandia_zebra
ENSANAG00000019974	A1CF	100	86.745	ENSMGAG00000001507	A1CF	100	86.745	Meleagris_gallopavo
ENSANAG00000019974	A1CF	100	92.101	ENSMAUG00000007422	A1cf	100	92.941	Mesocricetus_auratus
ENSANAG00000019974	A1CF	100	96.441	ENSMICG00000003377	A1CF	100	96.441	Microcebus_murinus
ENSANAG00000019974	A1CF	100	92.773	ENSMOCG00000021536	A1cf	100	92.605	Microtus_ochrogaster
ENSANAG00000019974	A1CF	100	68.605	ENSMMOG00000009422	a1cf	100	70.764	Mola_mola
ENSANAG00000019974	A1CF	89	92.706	ENSMODG00000016478	A1CF	97	92.706	Monodelphis_domestica
ENSANAG00000019974	A1CF	100	73.435	ENSMALG00000012992	a1cf	100	73.096	Monopterus_albus
ENSANAG00000019974	A1CF	100	93.526	MGP_CAROLIEiJ_G0022873	A1cf	100	93.867	Mus_caroli
ENSANAG00000019974	A1CF	100	93.526	ENSMUSG00000052595	A1cf	99	96.325	Mus_musculus
ENSANAG00000019974	A1CF	100	93.015	MGP_PahariEiJ_G0014366	A1cf	100	93.015	Mus_pahari
ENSANAG00000019974	A1CF	100	93.015	MGP_SPRETEiJ_G0023792	A1cf	100	93.356	Mus_spretus
ENSANAG00000019974	A1CF	100	88.889	ENSMPUG00000016971	A1CF	100	89.057	Mustela_putorius_furo
ENSANAG00000019974	A1CF	100	93.277	ENSMLUG00000016071	A1CF	100	93.277	Myotis_lucifugus
ENSANAG00000019974	A1CF	100	93.782	ENSNGAG00000015136	A1cf	100	93.782	Nannospalax_galili
ENSANAG00000019974	A1CF	100	76.033	ENSNBRG00000001712	a1cf	100	78.017	Neolamprologus_brichardi
ENSANAG00000019974	A1CF	100	97.815	ENSNLEG00000012028	A1CF	100	97.815	Nomascus_leucogenys
ENSANAG00000019974	A1CF	94	91.697	ENSMEUG00000015909	A1CF	100	91.697	Notamacropus_eugenii
ENSANAG00000019974	A1CF	88	83.810	ENSOPRG00000010667	A1CF	98	83.865	Ochotona_princeps
ENSANAG00000019974	A1CF	100	76.364	ENSONIG00000019105	a1cf	100	77.521	Oreochromis_niloticus
ENSANAG00000019974	A1CF	78	90.632	ENSOANG00000007360	A1CF	99	90.632	Ornithorhynchus_anatinus
ENSANAG00000019974	A1CF	100	94.388	ENSOCUG00000011587	A1CF	100	95.748	Oryctolagus_cuniculus
ENSANAG00000019974	A1CF	100	73.258	ENSORLG00000013342	a1cf	100	73.258	Oryzias_latipes
ENSANAG00000019974	A1CF	100	74.837	ENSORLG00020000586	a1cf	100	75.367	Oryzias_latipes_hni
ENSANAG00000019974	A1CF	100	74.673	ENSORLG00015018569	a1cf	100	75.204	Oryzias_latipes_hsok
ENSANAG00000019974	A1CF	100	76.119	ENSOMEG00000013531	a1cf	100	75.954	Oryzias_melastigma
ENSANAG00000019974	A1CF	100	94.613	ENSOGAG00000012884	A1CF	100	94.949	Otolemur_garnettii
ENSANAG00000019974	A1CF	100	93.950	ENSOARG00000013695	A1CF	100	94.286	Ovis_aries
ENSANAG00000019974	A1CF	100	97.181	ENSPPAG00000028115	A1CF	100	97.368	Pan_paniscus
ENSANAG00000019974	A1CF	100	93.434	ENSPPRG00000012180	A1CF	100	93.603	Panthera_pardus
ENSANAG00000019974	A1CF	100	93.434	ENSPTIG00000021223	A1CF	100	93.603	Panthera_tigris_altaica
ENSANAG00000019974	A1CF	100	98.296	ENSPTRG00000002508	A1CF	100	98.296	Pan_troglodytes
ENSANAG00000019974	A1CF	100	98.464	ENSPANG00000021988	A1CF	100	98.464	Papio_anubis
ENSANAG00000019974	A1CF	100	79.000	ENSPKIG00000025176	a1cf	100	79.000	Paramormyrops_kingsleyae
ENSANAG00000019974	A1CF	100	88.927	ENSPSIG00000010318	A1CF	100	88.927	Pelodiscus_sinensis
ENSANAG00000019974	A1CF	88	72.340	ENSPMGG00000013359	a1cf	99	68.322	Periophthalmus_magnuspinnatus
ENSANAG00000019974	A1CF	100	93.445	ENSPEMG00000015021	A1cf	100	93.445	Peromyscus_maniculatus_bairdii
ENSANAG00000019974	A1CF	100	91.482	ENSPCIG00000002175	A1CF	100	91.482	Phascolarctos_cinereus
ENSANAG00000019974	A1CF	100	75.407	ENSPFOG00000006683	a1cf	100	77.199	Poecilia_formosa
ENSANAG00000019974	A1CF	100	75.244	ENSPFOG00000007437	-	100	77.036	Poecilia_formosa
ENSANAG00000019974	A1CF	100	76.238	ENSPLAG00000001210	-	100	78.053	Poecilia_latipinna
ENSANAG00000019974	A1CF	100	76.238	ENSPLAG00000000026	a1cf	100	78.053	Poecilia_latipinna
ENSANAG00000019974	A1CF	100	67.647	ENSPMEG00000015529	-	100	69.444	Poecilia_mexicana
ENSANAG00000019974	A1CF	100	68.543	ENSPMEG00000000921	a1cf	100	70.364	Poecilia_mexicana
ENSANAG00000019974	A1CF	100	75.407	ENSPREG00000016298	a1cf	100	76.873	Poecilia_reticulata
ENSANAG00000019974	A1CF	100	98.978	ENSPPYG00000002819	A1CF	100	98.978	Pongo_abelii
ENSANAG00000019974	A1CF	79	74.784	ENSPCAG00000006463	A1CF	79	74.784	Procavia_capensis
ENSANAG00000019974	A1CF	100	95.638	ENSPCOG00000024172	A1CF	100	95.638	Propithecus_coquereli
ENSANAG00000019974	A1CF	100	74.878	ENSPNYG00000017944	a1cf	100	76.835	Pundamilia_nyererei
ENSANAG00000019974	A1CF	100	80.872	ENSPNAG00000007704	a1cf	100	80.872	Pygocentrus_nattereri
ENSANAG00000019974	A1CF	100	93.526	ENSRNOG00000033195	A1cf	100	93.867	Rattus_norvegicus
ENSANAG00000019974	A1CF	100	90.101	ENSRBIG00000042892	A1CF	100	97.012	Rhinopithecus_bieti
ENSANAG00000019974	A1CF	100	97.138	ENSRROG00000041398	A1CF	100	97.138	Rhinopithecus_roxellana
ENSANAG00000019974	A1CF	100	98.673	ENSSBOG00000021930	A1CF	100	98.807	Saimiri_boliviensis_boliviensis
ENSANAG00000019974	A1CF	100	90.119	ENSSHAG00000005096	A1CF	100	90.119	Sarcophilus_harrisii
ENSANAG00000019974	A1CF	100	79.832	ENSSFOG00015011774	a1cf	100	80.000	Scleropages_formosus
ENSANAG00000019974	A1CF	100	74.593	ENSSMAG00000013271	a1cf	100	74.919	Scophthalmus_maximus
ENSANAG00000019974	A1CF	100	75.456	ENSSDUG00000013930	a1cf	100	76.451	Seriola_dumerili
ENSANAG00000019974	A1CF	100	70.736	ENSSLDG00000004290	a1cf	100	71.739	Seriola_lalandi_dorsalis
ENSANAG00000019974	A1CF	99	81.513	ENSSARG00000005940	A1CF	96	85.484	Sorex_araneus
ENSANAG00000019974	A1CF	99	83.860	ENSSPUG00000006797	A1CF	99	83.416	Sphenodon_punctatus
ENSANAG00000019974	A1CF	100	95.126	ENSSSCG00000010431	A1CF	100	95.126	Sus_scrofa
ENSANAG00000019974	A1CF	100	85.953	ENSTGUG00000005090	A1CF	100	85.240	Taeniopygia_guttata
ENSANAG00000019974	A1CF	100	73.573	ENSTRUG00000001982	a1cf	100	73.899	Takifugu_rubripes
ENSANAG00000019974	A1CF	100	74.472	ENSTNIG00000003580	a1cf	100	74.472	Tetraodon_nigroviridis
ENSANAG00000019974	A1CF	100	86.899	ENSTTRG00000013190	A1CF	100	87.231	Tursiops_truncatus
ENSANAG00000019974	A1CF	100	95.734	ENSUAMG00000020065	A1CF	100	95.734	Ursus_americanus
ENSANAG00000019974	A1CF	100	93.939	ENSUMAG00000011162	A1CF	100	94.108	Ursus_maritimus
ENSANAG00000019974	A1CF	99	80.897	ENSVPAG00000006130	A1CF	99	80.897	Vicugna_pacos
ENSANAG00000019974	A1CF	100	95.222	ENSVVUG00000002504	A1CF	100	95.563	Vulpes_vulpes
ENSANAG00000019974	A1CF	100	77.629	ENSXETG00000006611	a1cf	100	77.462	Xenopus_tropicalis
ENSANAG00000019974	A1CF	100	77.575	ENSXCOG00000003302	a1cf	100	78.904	Xiphophorus_couchianus
ENSANAG00000019974	A1CF	100	76.557	ENSXMAG00000016703	a1cf	100	77.869	Xiphophorus_maculatus