EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000020017 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: X-ray repair cross-complementing protein 6 pseudogene
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 1959 bases
Position: chrKZ207384.1:939549-941507
Accession: 105732929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000004034	SAP	PF02037.27	1.4e-09	1	1
ENSANAP00000004042	SAP	PF02037.27	3.3e-09	1	1
ENSANAP00000004022	SAP	PF02037.27	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000021745	-	1674	-	ENSANAP00000004022	557 (aa)	-	A0A2K5C5R0
ENSANAT00000021768	-	1545	-	ENSANAP00000004042	514 (aa)	-	A0A2K5C5S8
ENSANAT00000021757	-	666	-	ENSANAP00000004034	221 (aa)	-	A0A2K5C5R9
ENSANAT00000021680	-	975	-	ENSANAP00000003966	324 (aa)	-	A0A2K5C5I2

Gene Model

Click here to download ENSANAG00000020017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000020017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000020017	-	91	97.525	ENSANAG00000018684	XRCC6	100	88.014
ENSANAG00000020017	-	100	80.000	ENSANAG00000023445	-	100	80.000
ENSANAG00000020017	-	100	76.882	ENSANAG00000035230	-	100	77.011

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000020017	-	91	96.535	ENSG00000196419	XRCC6	100	87.192	Homo_sapiens
ENSANAG00000020017	-	99	50.000	ENSAPOG00000012704	xrcc6	99	50.166	Acanthochromis_polyacanthus
ENSANAG00000020017	-	99	49.587	ENSACIG00000021277	xrcc6	99	49.752	Amphilophus_citrinellus
ENSANAG00000020017	-	99	49.175	ENSAOCG00000021344	xrcc6	99	49.175	Amphiprion_ocellaris
ENSANAG00000020017	-	99	49.010	ENSAPEG00000020712	xrcc6	99	49.010	Amphiprion_percula
ENSANAG00000020017	-	99	49.587	ENSATEG00000007119	xrcc6	99	49.752	Anabas_testudineus
ENSANAG00000020017	-	97	62.615	ENSAPLG00000004469	XRCC6	99	62.250	Anas_platyrhynchos
ENSANAG00000020017	-	99	50.083	ENSACLG00000018608	xrcc6	99	50.083	Astatotilapia_calliptera
ENSANAG00000020017	-	99	50.411	ENSAMXG00000007545	xrcc6	99	50.411	Astyanax_mexicanus
ENSANAG00000020017	-	100	91.556	ENSCJAG00000044926	-	100	91.556	Callithrix_jacchus
ENSANAG00000020017	-	100	92.444	ENSCJAG00000040177	-	100	92.444	Callithrix_jacchus
ENSANAG00000020017	-	91	97.525	ENSCJAG00000045512	XRCC6	100	88.177	Callithrix_jacchus
ENSANAG00000020017	-	81	94.972	ENSCJAG00000039518	-	100	82.988	Callithrix_jacchus
ENSANAG00000020017	-	100	92.444	ENSCJAG00000043192	-	100	92.444	Callithrix_jacchus
ENSANAG00000020017	-	99	76.645	ENSTSYG00000011348	XRCC6	99	76.809	Carlito_syrichta
ENSANAG00000020017	-	100	88.312	ENSCCAG00000030041	-	95	83.580	Cebus_capucinus
ENSANAG00000020017	-	93	86.792	ENSCCAG00000037663	-	97	77.414	Cebus_capucinus
ENSANAG00000020017	-	91	97.525	ENSCCAG00000030468	-	100	80.546	Cebus_capucinus
ENSANAG00000020017	-	100	74.324	ENSCCAG00000035711	-	100	74.662	Cebus_capucinus
ENSANAG00000020017	-	91	97.030	ENSCATG00000042366	XRCC6	100	87.356	Cercocebus_atys
ENSANAG00000020017	-	99	76.073	ENSCLAG00000016669	XRCC6	99	76.403	Chinchilla_lanigera
ENSANAG00000020017	-	91	97.030	ENSCSAG00000005784	XRCC6	100	87.356	Chlorocebus_sabaeus
ENSANAG00000020017	-	99	65.404	ENSCPBG00000020535	XRCC6	99	65.404	Chrysemys_picta_bellii
ENSANAG00000020017	-	98	32.209	ENSCING00000000633	-	97	32.209	Ciona_intestinalis
ENSANAG00000020017	-	92	38.537	ENSCSAVG00000000984	-	99	38.298	Ciona_savignyi
ENSANAG00000020017	-	91	97.030	ENSCANG00000031032	XRCC6	100	87.356	Colobus_angolensis_palliatus
ENSANAG00000020017	-	91	81.592	ENSCGRG00001019029	Xrcc6	99	68.812	Cricetulus_griseus_chok1gshd
ENSANAG00000020017	-	99	76.403	ENSCGRG00000001528	Xrcc6	99	76.568	Cricetulus_griseus_crigri
ENSANAG00000020017	-	90	58.621	ENSCSEG00000020434	xrcc6	99	49.261	Cynoglossus_semilaevis
ENSANAG00000020017	-	99	49.835	ENSCVAG00000002189	xrcc6	99	49.835	Cyprinodon_variegatus
ENSANAG00000020017	-	90	61.084	ENSDARG00000071551	xrcc6	99	51.320	Danio_rerio
ENSANAG00000020017	-	91	64.677	ENSETEG00000015333	-	77	69.231	Echinops_telfairi
ENSANAG00000020017	-	99	75.947	ENSEASG00005001514	XRCC6	99	76.442	Equus_asinus_asinus
ENSANAG00000020017	-	99	75.618	ENSECAG00000017563	XRCC6	99	76.827	Equus_caballus
ENSANAG00000020017	-	100	48.609	ENSELUG00000020301	xrcc6	100	48.936	Esox_lucius
ENSANAG00000020017	-	99	61.475	ENSFALG00000011908	XRCC6	97	61.967	Ficedula_albicollis
ENSANAG00000020017	-	99	50.411	ENSFHEG00000016833	xrcc6	99	50.411	Fundulus_heteroclitus
ENSANAG00000020017	-	94	53.333	ENSGMOG00000013524	xrcc6	99	42.036	Gadus_morhua
ENSANAG00000020017	-	99	62.029	ENSGALG00000011932	XRCC6	99	62.029	Gallus_gallus
ENSANAG00000020017	-	99	48.191	ENSGAFG00000008130	xrcc6	99	48.355	Gambusia_affinis
ENSANAG00000020017	-	99	47.213	ENSGACG00000004868	xrcc6	99	47.377	Gasterosteus_aculeatus
ENSANAG00000020017	-	99	65.733	ENSGAGG00000017518	XRCC6	99	65.733	Gopherus_agassizii
ENSANAG00000020017	-	100	87.225	ENSGGOG00000026303	-	100	87.225	Gorilla_gorilla
ENSANAG00000020017	-	91	96.040	ENSGGOG00000015885	XRCC6	100	87.192	Gorilla_gorilla
ENSANAG00000020017	-	90	57.635	ENSHBUG00000023281	xrcc6	99	50.089	Haplochromis_burtoni
ENSANAG00000020017	-	99	74.545	ENSHGLG00000018078	XRCC6	99	74.876	Heterocephalus_glaber_female
ENSANAG00000020017	-	99	74.545	ENSHGLG00100011264	XRCC6	99	74.876	Heterocephalus_glaber_male
ENSANAG00000020017	-	89	58.291	ENSHCOG00000009821	xrcc6	99	47.769	Hippocampus_comes
ENSANAG00000020017	-	91	57.561	ENSIPUG00000000767	xrcc6	99	49.671	Ictalurus_punctatus
ENSANAG00000020017	-	99	78.418	ENSSTOG00000009490	XRCC6	99	78.583	Ictidomys_tridecemlineatus
ENSANAG00000020017	-	99	70.181	ENSJJAG00000017136	Xrcc6	99	71.334	Jaculus_jaculus
ENSANAG00000020017	-	99	49.505	ENSKMAG00000002141	xrcc6	99	50.000	Kryptolebias_marmoratus
ENSANAG00000020017	-	91	56.863	ENSLBEG00000002691	xrcc6	99	48.768	Labrus_bergylta
ENSANAG00000020017	-	83	58.824	ENSLOCG00000011533	xrcc6	96	58.824	Lepisosteus_oculatus
ENSANAG00000020017	-	100	90.090	ENSMFAG00000003352	XRCC6	100	90.090	Macaca_fascicularis
ENSANAG00000020017	-	91	97.030	ENSMMUG00000001856	XRCC6	100	87.356	Macaca_mulatta
ENSANAG00000020017	-	91	97.030	ENSMNEG00000035076	XRCC6	100	87.356	Macaca_nemestrina
ENSANAG00000020017	-	91	97.030	ENSMLEG00000019869	XRCC6	100	87.356	Mandrillus_leucophaeus
ENSANAG00000020017	-	89	55.721	ENSMAMG00000003405	xrcc6	96	48.714	Mastacembelus_armatus
ENSANAG00000020017	-	99	48.350	ENSMAMG00000003368	xrcc6	99	48.350	Mastacembelus_armatus
ENSANAG00000020017	-	99	49.587	ENSMZEG00005028080	xrcc6	99	49.587	Maylandia_zebra
ENSANAG00000020017	-	99	61.375	ENSMGAG00000012146	XRCC6	99	61.338	Meleagris_gallopavo
ENSANAG00000020017	-	99	75.743	ENSMAUG00000017340	Xrcc6	99	75.908	Mesocricetus_auratus
ENSANAG00000020017	-	99	75.578	ENSMOCG00000015717	Xrcc6	99	75.743	Microtus_ochrogaster
ENSANAG00000020017	-	99	48.926	ENSMMOG00000003536	xrcc6	99	48.926	Mola_mola
ENSANAG00000020017	-	99	50.083	ENSMALG00000013912	xrcc6	94	50.413	Monopterus_albus
ENSANAG00000020017	-	99	69.142	MGP_CAROLIEiJ_G0020067	Xrcc6	99	69.307	Mus_caroli
ENSANAG00000020017	-	99	74.587	ENSMUSG00000022471	Xrcc6	99	74.752	Mus_musculus
ENSANAG00000020017	-	99	73.927	MGP_PahariEiJ_G0020069	Xrcc6	99	74.092	Mus_pahari
ENSANAG00000020017	-	97	75.000	MGP_SPRETEiJ_G0020967	Xrcc6	99	75.215	Mus_spretus
ENSANAG00000020017	-	99	74.587	ENSNGAG00000013750	Xrcc6	99	74.752	Nannospalax_galili
ENSANAG00000020017	-	99	50.579	ENSNBRG00000004125	xrcc6	99	50.579	Neolamprologus_brichardi
ENSANAG00000020017	-	100	89.778	ENSNLEG00000034343	-	100	89.778	Nomascus_leucogenys
ENSANAG00000020017	-	91	79.602	ENSOPRG00000002386	XRCC6	99	74.483	Ochotona_princeps
ENSANAG00000020017	-	99	76.263	ENSODEG00000015847	XRCC6	99	76.263	Octodon_degus
ENSANAG00000020017	-	99	50.328	ENSONIG00000019715	xrcc6	99	50.656	Oreochromis_niloticus
ENSANAG00000020017	-	92	75.490	ENSOANG00000011328	XRCC6	98	72.906	Ornithorhynchus_anatinus
ENSANAG00000020017	-	100	76.974	ENSOCUG00000006948	XRCC6	100	77.632	Oryctolagus_cuniculus
ENSANAG00000020017	-	99	48.361	ENSORLG00020007820	xrcc6	99	48.361	Oryzias_latipes_hni
ENSANAG00000020017	-	99	47.869	ENSORLG00015006406	xrcc6	99	47.869	Oryzias_latipes_hsok
ENSANAG00000020017	-	99	47.869	ENSOMEG00000008998	xrcc6	99	48.033	Oryzias_melastigma
ENSANAG00000020017	-	99	77.759	ENSOGAG00000008821	XRCC6	99	77.759	Otolemur_garnettii
ENSANAG00000020017	-	91	96.535	ENSPPAG00000037167	XRCC6	100	81.419	Pan_paniscus
ENSANAG00000020017	-	100	88.444	ENSPPAG00000043936	-	100	88.444	Pan_paniscus
ENSANAG00000020017	-	91	96.535	ENSPTRG00000045824	XRCC6	99	88.316	Pan_troglodytes
ENSANAG00000020017	-	100	88.444	ENSPTRG00000043309	-	100	88.444	Pan_troglodytes
ENSANAG00000020017	-	100	88.444	ENSPTRG00000040111	-	100	88.444	Pan_troglodytes
ENSANAG00000020017	-	91	96.535	ENSPTRG00000022548	XRCC6	99	88.316	Pan_troglodytes
ENSANAG00000020017	-	91	97.030	ENSPANG00000001252	XRCC6	99	88.316	Papio_anubis
ENSANAG00000020017	-	91	61.463	ENSPKIG00000003974	xrcc6	99	53.223	Paramormyrops_kingsleyae
ENSANAG00000020017	-	92	72.059	ENSPSIG00000016499	-	99	64.961	Pelodiscus_sinensis
ENSANAG00000020017	-	99	49.498	ENSPMGG00000014220	xrcc6	100	49.833	Periophthalmus_magnuspinnatus
ENSANAG00000020017	-	99	75.083	ENSPEMG00000023446	Xrcc6	99	75.248	Peromyscus_maniculatus_bairdii
ENSANAG00000020017	-	100	70.115	ENSPCIG00000026409	XRCC6	99	70.115	Phascolarctos_cinereus
ENSANAG00000020017	-	99	48.768	ENSPFOG00000017173	xrcc6	99	48.768	Poecilia_formosa
ENSANAG00000020017	-	99	48.440	ENSPLAG00000000562	xrcc6	99	48.440	Poecilia_latipinna
ENSANAG00000020017	-	99	48.933	ENSPMEG00000018478	xrcc6	99	48.933	Poecilia_mexicana
ENSANAG00000020017	-	99	48.773	ENSPREG00000020957	xrcc6	93	48.773	Poecilia_reticulata
ENSANAG00000020017	-	100	85.495	ENSPPYG00000011876	XRCC6	100	85.836	Pongo_abelii
ENSANAG00000020017	-	99	75.083	ENSPVAG00000001168	XRCC6	99	75.413	Pteropus_vampyrus
ENSANAG00000020017	-	99	50.083	ENSPNYG00000003815	xrcc6	99	47.642	Pundamilia_nyererei
ENSANAG00000020017	-	99	74.587	ENSRNOG00000006392	Xrcc6	99	74.752	Rattus_norvegicus
ENSANAG00000020017	-	91	97.030	ENSRBIG00000039794	XRCC6	100	82.314	Rhinopithecus_bieti
ENSANAG00000020017	-	100	88.987	ENSRROG00000030297	XRCC6	100	88.987	Rhinopithecus_roxellana
ENSANAG00000020017	-	100	86.667	ENSRROG00000037576	-	100	86.667	Rhinopithecus_roxellana
ENSANAG00000020017	-	100	84.163	ENSSBOG00000025802	-	100	84.163	Saimiri_boliviensis_boliviensis
ENSANAG00000020017	-	91	97.030	ENSSBOG00000024724	-	100	77.641	Saimiri_boliviensis_boliviensis
ENSANAG00000020017	-	99	69.243	ENSSHAG00000010790	XRCC6	99	69.408	Sarcophilus_harrisii
ENSANAG00000020017	-	90	62.871	ENSSFOG00015014409	xrcc6	99	53.871	Scleropages_formosus
ENSANAG00000020017	-	99	49.917	ENSSMAG00000006496	xrcc6	99	50.083	Scophthalmus_maximus
ENSANAG00000020017	-	99	49.261	ENSSDUG00000007542	xrcc6	99	49.261	Seriola_dumerili
ENSANAG00000020017	-	99	48.768	ENSSLDG00000009974	xrcc6	99	48.768	Seriola_lalandi_dorsalis
ENSANAG00000020017	-	99	64.803	ENSSPUG00000012086	XRCC6	99	64.909	Sphenodon_punctatus
ENSANAG00000020017	-	99	49.589	ENSSPAG00000015199	xrcc6	99	49.754	Stegastes_partitus
ENSANAG00000020017	-	97	63.918	ENSTGUG00000009852	-	99	62.562	Taeniopygia_guttata
ENSANAG00000020017	-	99	49.007	ENSTRUG00000017070	xrcc6	99	49.007	Takifugu_rubripes
ENSANAG00000020017	-	90	58.252	ENSTNIG00000012947	xrcc6	99	50.847	Tetraodon_nigroviridis
ENSANAG00000020017	-	97	69.174	ENSTBEG00000011736	XRCC6	99	69.880	Tupaia_belangeri
ENSANAG00000020017	-	99	62.603	ENSTTRG00000006749	XRCC6	90	76.176	Tursiops_truncatus
ENSANAG00000020017	-	99	48.768	ENSXMAG00000009691	xrcc6	99	48.768	Xiphophorus_maculatus