EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000020297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 429 bases
Position: chrJYKP02095457.1:8218-8646
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000004392	LSM	PF01423.22	6.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000022146	-	330	-	ENSANAP00000004392	109 (aa)	-	A0A2K5C6R7

Gene Model

Click here to download ENSANAG00000020297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000020297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000020297	-	65	91.549	ENSANAG00000032845	SNRPF	83	91.549
ENSANAG00000020297	-	61	50.000	ENSANAG00000030568	-	83	50.000
ENSANAG00000020297	-	65	61.972	ENSANAG00000025860	-	79	61.972
ENSANAG00000020297	-	58	47.619	ENSANAG00000021839	-	77	47.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000020297	-	65	91.549	ENSG00000139343	SNRPF	83	91.549	Homo_sapiens
ENSANAG00000020297	-	73	83.750	ENSAPOG00000003377	snrpf	62	83.750	Acanthochromis_polyacanthus
ENSANAG00000020297	-	65	91.549	ENSAMEG00000002166	-	84	91.549	Ailuropoda_melanoleuca
ENSANAG00000020297	-	69	78.667	ENSAMEG00000018718	-	86	79.730	Ailuropoda_melanoleuca
ENSANAG00000020297	-	65	88.732	ENSACIG00000013216	snrpf	84	88.732	Amphilophus_citrinellus
ENSANAG00000020297	-	65	88.732	ENSAOCG00000015108	snrpf	84	88.732	Amphiprion_ocellaris
ENSANAG00000020297	-	65	88.732	ENSAPEG00000022022	snrpf	84	88.732	Amphiprion_percula
ENSANAG00000020297	-	70	85.526	ENSATEG00000022625	snrpf	81	85.526	Anabas_testudineus
ENSANAG00000020297	-	71	85.714	ENSACAG00000014073	SNRPF	87	85.714	Anolis_carolinensis
ENSANAG00000020297	-	65	88.732	ENSACLG00000016066	snrpf	84	88.732	Astatotilapia_calliptera
ENSANAG00000020297	-	65	88.732	ENSAMXG00000007421	snrpf	82	88.732	Astyanax_mexicanus
ENSANAG00000020297	-	68	86.486	ENSBTAG00000050012	-	88	85.915	Bos_taurus
ENSANAG00000020297	-	65	91.549	ENSBTAG00000016271	SNRPF	83	91.549	Bos_taurus
ENSANAG00000020297	-	70	68.421	WBGene00004918	snr-5	84	70.423	Caenorhabditis_elegans
ENSANAG00000020297	-	65	91.549	ENSCJAG00000002705	-	83	91.549	Callithrix_jacchus
ENSANAG00000020297	-	63	86.957	ENSCAFG00000031151	-	83	87.324	Canis_familiaris
ENSANAG00000020297	-	65	91.549	ENSCAFG00000006395	-	64	91.549	Canis_familiaris
ENSANAG00000020297	-	72	82.051	ENSCAFG00020013161	-	74	90.000	Canis_lupus_dingo
ENSANAG00000020297	-	63	86.957	ENSCAFG00020010823	-	83	87.324	Canis_lupus_dingo
ENSANAG00000020297	-	65	80.282	ENSTSYG00000030635	-	82	80.282	Carlito_syrichta
ENSANAG00000020297	-	89	74.000	ENSTSYG00000031636	-	78	73.118	Carlito_syrichta
ENSANAG00000020297	-	65	84.722	ENSTSYG00000036502	-	82	84.722	Carlito_syrichta
ENSANAG00000020297	-	65	91.549	ENSCAPG00000007242	SNRPF	84	91.549	Cavia_aperea
ENSANAG00000020297	-	65	91.549	ENSCPOG00000013898	SNRPF	83	91.549	Cavia_porcellus
ENSANAG00000020297	-	90	75.248	ENSCCAG00000033627	-	71	74.444	Cebus_capucinus
ENSANAG00000020297	-	65	91.549	ENSCCAG00000037378	-	83	91.549	Cebus_capucinus
ENSANAG00000020297	-	75	91.463	ENSCCAG00000017356	-	83	91.549	Cebus_capucinus
ENSANAG00000020297	-	65	91.549	ENSCLAG00000007200	SNRPF	83	91.549	Chinchilla_lanigera
ENSANAG00000020297	-	82	74.286	ENSCSAG00000003602	-	85	74.286	Chlorocebus_sabaeus
ENSANAG00000020297	-	55	90.000	ENSCHOG00000009392	SNRPF	94	90.000	Choloepus_hoffmanni
ENSANAG00000020297	-	75	80.488	ENSCPBG00000001985	-	85	81.690	Chrysemys_picta_bellii
ENSANAG00000020297	-	75	82.927	ENSCPBG00000026463	-	83	83.099	Chrysemys_picta_bellii
ENSANAG00000020297	-	65	83.099	ENSCPBG00000006227	-	83	83.099	Chrysemys_picta_bellii
ENSANAG00000020297	-	95	72.222	ENSCPBG00000024287	-	78	71.134	Chrysemys_picta_bellii
ENSANAG00000020297	-	75	81.707	ENSCSAVG00000007498	-	81	83.099	Ciona_savignyi
ENSANAG00000020297	-	65	84.507	ENSCGRG00001008965	-	55	84.507	Cricetulus_griseus_chok1gshd
ENSANAG00000020297	-	65	91.549	ENSCGRG00001017100	-	83	91.549	Cricetulus_griseus_chok1gshd
ENSANAG00000020297	-	65	91.549	ENSCGRG00000000336	-	83	91.549	Cricetulus_griseus_crigri
ENSANAG00000020297	-	70	85.526	ENSCGRG00000018878	-	89	84.507	Cricetulus_griseus_crigri
ENSANAG00000020297	-	75	80.488	ENSCSEG00000004748	snrpf	83	87.324	Cynoglossus_semilaevis
ENSANAG00000020297	-	73	83.750	ENSCVAG00000000397	snrpf	63	83.750	Cyprinodon_variegatus
ENSANAG00000020297	-	65	86.301	ENSDARG00000105037	snrpf	83	86.301	Danio_rerio
ENSANAG00000020297	-	68	75.676	ENSDNOG00000049373	-	64	75.676	Dasypus_novemcinctus
ENSANAG00000020297	-	84	75.510	ENSDNOG00000043775	-	60	75.510	Dasypus_novemcinctus
ENSANAG00000020297	-	74	81.609	ENSDNOG00000048989	-	78	81.609	Dasypus_novemcinctus
ENSANAG00000020297	-	62	85.294	ENSDORG00000025351	-	94	85.294	Dipodomys_ordii
ENSANAG00000020297	-	54	89.831	ENSDORG00000029740	-	72	89.831	Dipodomys_ordii
ENSANAG00000020297	-	75	73.171	FBgn0000426	SmF	81	76.056	Drosophila_melanogaster
ENSANAG00000020297	-	65	91.549	ENSETEG00000001558	-	83	91.549	Echinops_telfairi
ENSANAG00000020297	-	74	69.136	ENSEBUG00000001793	-	72	77.612	Eptatretus_burgeri
ENSANAG00000020297	-	82	71.429	ENSECAG00000019817	SNRPF	80	74.747	Equus_caballus
ENSANAG00000020297	-	65	91.549	ENSEEUG00000013509	SNRPF	84	91.549	Erinaceus_europaeus
ENSANAG00000020297	-	65	88.732	ENSELUG00000003121	RUXF	83	88.732	Esox_lucius
ENSANAG00000020297	-	91	74.000	ENSELUG00000007737	RUXF	82	87.324	Esox_lucius
ENSANAG00000020297	-	65	67.606	ENSFCAG00000021942	-	82	67.606	Felis_catus
ENSANAG00000020297	-	65	91.549	ENSFCAG00000029966	-	83	91.549	Felis_catus
ENSANAG00000020297	-	80	67.742	ENSFCAG00000031148	-	80	65.517	Felis_catus
ENSANAG00000020297	-	65	91.549	ENSFALG00000010799	SNRPF	83	91.549	Ficedula_albicollis
ENSANAG00000020297	-	65	91.549	ENSFDAG00000002831	-	83	91.549	Fukomys_damarensis
ENSANAG00000020297	-	80	75.862	ENSFHEG00000003240	snrpf	67	85.714	Fundulus_heteroclitus
ENSANAG00000020297	-	65	88.732	ENSGMOG00000007741	snrpf	84	88.732	Gadus_morhua
ENSANAG00000020297	-	65	91.549	ENSGALG00000011409	SNRPF	83	91.549	Gallus_gallus
ENSANAG00000020297	-	65	88.732	ENSGAFG00000016187	snrpf	82	88.732	Gambusia_affinis
ENSANAG00000020297	-	65	90.141	ENSGACG00000020055	snrpf	84	90.141	Gasterosteus_aculeatus
ENSANAG00000020297	-	55	86.667	ENSGAGG00000011163	-	86	89.796	Gopherus_agassizii
ENSANAG00000020297	-	68	86.486	ENSGAGG00000012945	-	80	75.862	Gopherus_agassizii
ENSANAG00000020297	-	62	77.941	ENSGAGG00000014132	-	82	77.941	Gopherus_agassizii
ENSANAG00000020297	-	72	86.076	ENSGAGG00000022991	-	80	88.235	Gopherus_agassizii
ENSANAG00000020297	-	55	86.667	ENSGAGG00000020974	-	50	86.667	Gopherus_agassizii
ENSANAG00000020297	-	69	69.333	ENSGGOG00000039564	-	85	67.606	Gorilla_gorilla
ENSANAG00000020297	-	76	74.699	ENSGGOG00000039936	-	78	73.239	Gorilla_gorilla
ENSANAG00000020297	-	65	91.549	ENSGGOG00000001127	-	84	91.549	Gorilla_gorilla
ENSANAG00000020297	-	65	90.141	ENSHGLG00000021172	-	83	90.141	Heterocephalus_glaber_female
ENSANAG00000020297	-	65	91.549	ENSHGLG00000009108	SNRPF	83	91.549	Heterocephalus_glaber_female
ENSANAG00000020297	-	65	90.141	ENSHGLG00100019596	-	83	90.141	Heterocephalus_glaber_male
ENSANAG00000020297	-	65	91.549	ENSHGLG00100008103	-	84	91.549	Heterocephalus_glaber_male
ENSANAG00000020297	-	56	77.941	ENSHCOG00000018663	snrpf	53	77.941	Hippocampus_comes
ENSANAG00000020297	-	65	88.732	ENSIPUG00000018994	snrpf	84	88.732	Ictalurus_punctatus
ENSANAG00000020297	-	65	91.549	ENSSTOG00000010434	-	83	91.549	Ictidomys_tridecemlineatus
ENSANAG00000020297	-	78	76.471	ENSJJAG00000004558	-	88	77.027	Jaculus_jaculus
ENSANAG00000020297	-	61	86.567	ENSJJAG00000004828	-	86	87.500	Jaculus_jaculus
ENSANAG00000020297	-	65	91.549	ENSJJAG00000011272	-	83	91.549	Jaculus_jaculus
ENSANAG00000020297	-	75	80.488	ENSJJAG00000010502	-	85	81.690	Jaculus_jaculus
ENSANAG00000020297	-	65	88.732	ENSKMAG00000013566	snrpf	83	88.732	Kryptolebias_marmoratus
ENSANAG00000020297	-	65	87.324	ENSLBEG00000008800	snrpf	83	87.324	Labrus_bergylta
ENSANAG00000020297	-	86	72.165	ENSLACG00000002456	-	83	72.165	Latimeria_chalumnae
ENSANAG00000020297	-	65	88.732	ENSLOCG00000015744	snrpf	83	88.732	Lepisosteus_oculatus
ENSANAG00000020297	-	65	91.549	ENSLAFG00000017426	SNRPF	83	91.549	Loxodonta_africana
ENSANAG00000020297	-	65	87.324	ENSMAMG00000016593	snrpf	84	87.324	Mastacembelus_armatus
ENSANAG00000020297	-	65	88.732	ENSMZEG00005014701	snrpf	84	88.732	Maylandia_zebra
ENSANAG00000020297	-	65	91.549	ENSMGAG00000011453	-	64	91.549	Meleagris_gallopavo
ENSANAG00000020297	-	65	85.915	ENSMAUG00000008799	-	83	85.915	Mesocricetus_auratus
ENSANAG00000020297	-	79	70.930	ENSMAUG00000010289	-	88	70.667	Mesocricetus_auratus
ENSANAG00000020297	-	58	92.063	ENSMAUG00000016909	-	85	92.063	Mesocricetus_auratus
ENSANAG00000020297	-	58	92.063	ENSMAUG00000019737	-	85	92.063	Mesocricetus_auratus
ENSANAG00000020297	-	65	91.549	ENSMICG00000012153	-	83	91.549	Microcebus_murinus
ENSANAG00000020297	-	77	71.000	ENSMICG00000030494	-	80	72.000	Microcebus_murinus
ENSANAG00000020297	-	62	76.471	ENSMOCG00000020220	-	87	76.471	Microtus_ochrogaster
ENSANAG00000020297	-	65	91.549	ENSMOCG00000020437	Snrpf	83	91.549	Microtus_ochrogaster
ENSANAG00000020297	-	65	81.690	ENSMOCG00000022166	-	78	81.690	Microtus_ochrogaster
ENSANAG00000020297	-	65	87.324	ENSMMOG00000007127	snrpf	83	87.324	Mola_mola
ENSANAG00000020297	-	65	91.549	ENSMODG00000008091	SNRPF	62	91.549	Monodelphis_domestica
ENSANAG00000020297	-	65	88.732	ENSMALG00000012328	snrpf	84	88.732	Monopterus_albus
ENSANAG00000020297	-	65	91.549	MGP_CAROLIEiJ_G0015735	-	83	91.549	Mus_caroli
ENSANAG00000020297	-	65	91.549	ENSMUSG00000020018	Snrpf	83	91.549	Mus_musculus
ENSANAG00000020297	-	65	91.549	MGP_PahariEiJ_G0031350	Snrpf	83	91.549	Mus_pahari
ENSANAG00000020297	-	65	91.549	MGP_SPRETEiJ_G0016553	Snrpf	83	91.549	Mus_spretus
ENSANAG00000020297	-	65	91.549	ENSMPUG00000007176	-	63	91.549	Mustela_putorius_furo
ENSANAG00000020297	-	81	75.532	ENSMLUG00000027932	-	89	75.532	Myotis_lucifugus
ENSANAG00000020297	-	65	91.549	ENSMLUG00000013577	-	84	91.549	Myotis_lucifugus
ENSANAG00000020297	-	81	75.532	ENSMLUG00000026149	-	89	75.532	Myotis_lucifugus
ENSANAG00000020297	-	75	75.610	ENSMLUG00000026269	-	67	73.239	Myotis_lucifugus
ENSANAG00000020297	-	81	75.532	ENSMLUG00000029201	-	89	75.532	Myotis_lucifugus
ENSANAG00000020297	-	65	91.549	ENSNGAG00000024292	-	83	91.549	Nannospalax_galili
ENSANAG00000020297	-	58	84.127	ENSNGAG00000005851	-	71	83.333	Nannospalax_galili
ENSANAG00000020297	-	71	85.714	ENSNBRG00000011682	snrpf	78	85.714	Neolamprologus_brichardi
ENSANAG00000020297	-	65	61.972	ENSMEUG00000000671	SNRPF	84	61.972	Notamacropus_eugenii
ENSANAG00000020297	-	65	91.549	ENSODEG00000010328	-	84	91.549	Octodon_degus
ENSANAG00000020297	-	86	69.307	ENSOCUG00000010925	SNRPF	88	70.000	Oryctolagus_cuniculus
ENSANAG00000020297	-	65	88.732	ENSORLG00020008216	snrpf	83	88.732	Oryzias_latipes_hni
ENSANAG00000020297	-	65	88.732	ENSORLG00015007418	snrpf	83	88.732	Oryzias_latipes_hsok
ENSANAG00000020297	-	65	90.141	ENSOMEG00000003018	snrpf	84	90.141	Oryzias_melastigma
ENSANAG00000020297	-	65	90.141	ENSOGAG00000030323	-	83	90.141	Otolemur_garnettii
ENSANAG00000020297	-	83	70.297	ENSOARG00000011853	-	88	70.297	Ovis_aries
ENSANAG00000020297	-	72	69.231	ENSPPAG00000037479	-	89	67.568	Pan_paniscus
ENSANAG00000020297	-	76	74.699	ENSPPAG00000037544	-	78	73.239	Pan_paniscus
ENSANAG00000020297	-	73	71.250	ENSPPRG00000007449	-	72	70.423	Panthera_pardus
ENSANAG00000020297	-	65	91.549	ENSPPRG00000005875	-	83	91.549	Panthera_pardus
ENSANAG00000020297	-	73	73.750	ENSPTIG00000005117	-	85	70.423	Panthera_tigris_altaica
ENSANAG00000020297	-	65	91.549	ENSPTIG00000007520	SNRPF	83	91.549	Panthera_tigris_altaica
ENSANAG00000020297	-	76	74.699	ENSPTRG00000043814	-	78	73.239	Pan_troglodytes
ENSANAG00000020297	-	69	69.333	ENSPTRG00000047717	-	85	67.606	Pan_troglodytes
ENSANAG00000020297	-	65	88.732	ENSPKIG00000014784	snrpf	78	88.732	Paramormyrops_kingsleyae
ENSANAG00000020297	-	65	91.549	ENSPSIG00000016462	SNRPF	83	91.549	Pelodiscus_sinensis
ENSANAG00000020297	-	65	87.324	ENSPMGG00000023548	snrpf	83	87.324	Periophthalmus_magnuspinnatus
ENSANAG00000020297	-	65	91.549	ENSPEMG00000023326	Snrpf	83	91.549	Peromyscus_maniculatus_bairdii
ENSANAG00000020297	-	65	88.732	ENSPLAG00000023932	snrpf	84	88.732	Poecilia_latipinna
ENSANAG00000020297	-	65	88.732	ENSPMEG00000003377	snrpf	84	88.732	Poecilia_mexicana
ENSANAG00000020297	-	65	88.732	ENSPREG00000022635	snrpf	82	88.732	Poecilia_reticulata
ENSANAG00000020297	-	65	91.549	ENSPPYG00000004847	-	83	91.549	Pongo_abelii
ENSANAG00000020297	-	65	91.549	ENSPCOG00000023833	-	83	91.549	Propithecus_coquereli
ENSANAG00000020297	-	65	91.549	ENSPVAG00000009036	SNRPF	83	91.549	Pteropus_vampyrus
ENSANAG00000020297	-	65	88.732	ENSPNYG00000021712	snrpf	84	88.732	Pundamilia_nyererei
ENSANAG00000020297	-	65	90.141	ENSPNAG00000019117	snrpf	84	90.141	Pygocentrus_nattereri
ENSANAG00000020297	-	65	91.549	ENSRNOG00000005556	Snrpf	83	91.549	Rattus_norvegicus
ENSANAG00000020297	-	65	88.732	ENSRBIG00000030414	-	83	88.732	Rhinopithecus_bieti
ENSANAG00000020297	-	65	88.732	ENSRROG00000021975	-	83	88.732	Rhinopithecus_roxellana
ENSANAG00000020297	-	72	53.750	YPR182W	SMX3	92	53.750	Saccharomyces_cerevisiae
ENSANAG00000020297	-	67	82.192	ENSSBOG00000027638	-	84	82.192	Saimiri_boliviensis_boliviensis
ENSANAG00000020297	-	65	78.873	ENSSBOG00000032297	-	81	78.873	Saimiri_boliviensis_boliviensis
ENSANAG00000020297	-	65	91.549	ENSSBOG00000036179	-	83	91.549	Saimiri_boliviensis_boliviensis
ENSANAG00000020297	-	65	91.549	ENSSBOG00000012868	-	83	91.549	Saimiri_boliviensis_boliviensis
ENSANAG00000020297	-	82	73.404	ENSSHAG00000012294	SNRPF	85	73.404	Sarcophilus_harrisii
ENSANAG00000020297	-	56	86.885	ENSSFOG00015021523	snrpf	91	86.885	Scleropages_formosus
ENSANAG00000020297	-	65	90.141	ENSSMAG00000005533	snrpf	82	90.141	Scophthalmus_maximus
ENSANAG00000020297	-	56	86.885	ENSSDUG00000016283	snrpf	73	86.885	Seriola_dumerili
ENSANAG00000020297	-	71	70.130	ENSSLDG00000003885	-	87	73.239	Seriola_lalandi_dorsalis
ENSANAG00000020297	-	70	85.526	ENSSLDG00000005119	snrpf	86	86.667	Seriola_lalandi_dorsalis
ENSANAG00000020297	-	65	91.549	ENSSPUG00000014590	-	84	91.549	Sphenodon_punctatus
ENSANAG00000020297	-	65	88.732	ENSSPAG00000003283	snrpf	81	88.732	Stegastes_partitus
ENSANAG00000020297	-	65	91.549	ENSSSCG00000000895	SNRPF	83	91.549	Sus_scrofa
ENSANAG00000020297	-	53	86.207	ENSTRUG00000014956	snrpf	84	86.207	Takifugu_rubripes
ENSANAG00000020297	-	65	87.324	ENSTNIG00000012672	snrpf	83	87.324	Tetraodon_nigroviridis
ENSANAG00000020297	-	65	61.972	ENSTTRG00000006070	SNRPF	83	61.972	Tursiops_truncatus
ENSANAG00000020297	-	78	78.824	ENSUAMG00000001101	-	87	79.730	Ursus_americanus
ENSANAG00000020297	-	65	91.549	ENSUAMG00000008176	-	83	91.549	Ursus_americanus
ENSANAG00000020297	-	65	91.549	ENSUMAG00000003528	-	83	91.549	Ursus_maritimus
ENSANAG00000020297	-	68	79.730	ENSUMAG00000006177	-	87	79.730	Ursus_maritimus
ENSANAG00000020297	-	65	91.549	ENSVPAG00000008712	-	83	91.549	Vicugna_pacos
ENSANAG00000020297	-	68	85.135	ENSVVUG00000023821	-	91	84.507	Vulpes_vulpes
ENSANAG00000020297	-	65	67.123	ENSXETG00000021630	snrpf	84	64.384	Xenopus_tropicalis
ENSANAG00000020297	-	65	88.732	ENSXCOG00000013860	snrpf	82	88.732	Xiphophorus_couchianus
ENSANAG00000020297	-	65	88.732	ENSXMAG00000015448	snrpf	84	88.732	Xiphophorus_maculatus