EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000020385 (Gene tree)
Gene ID: 105714883
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 5202 bases
Position: chrKZ196241.1:1420024-1425225
Accession: 105714883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000004608	RNA_pol_L_2	PF13656.6	5.4e-29	1	1
ENSANAP00000004620	RNA_pol_L_2	PF13656.6	9.5e-29	1	1
ENSANAP00000004613	RNA_pol_L_2	PF13656.6	3.3e-18	1	1
ENSANAP00000004608	RNA_pol_L	PF01193.24	6.1e-10	1	1
ENSANAP00000004620	RNA_pol_L	PF01193.24	1e-09	1	1
ENSANAP00000004613	RNA_pol_L	PF01193.24	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000022370	-	264	-	ENSANAP00000004613	87 (aa)	-	A0A2K5C7E3
ENSANAT00000022365	-	384	XM_012449006	ENSANAP00000004608	127 (aa)	XP_012304429	A0A2K5C7E0
ENSANAT00000022377	-	462	-	ENSANAP00000004620	153 (aa)	-	A0A2K5C7I9

Gene Model

Click here to download ENSANAG00000020385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000020385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000020385	-	78	31.373	ENSANAG00000024486	POLR1D	77	31.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000020385	-	100	92.126	ENSBTAG00000005446	POLR2J	100	92.126	Bos_taurus
ENSANAG00000020385	-	100	92.126	ENSCAFG00020013154	-	100	92.126	Canis_lupus_dingo
ENSANAG00000020385	-	100	92.126	ENSCHIG00000009008	-	100	92.126	Capra_hircus
ENSANAG00000020385	-	82	98.592	ENSCAPG00000013625	-	96	84.426	Cavia_aperea
ENSANAG00000020385	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSANAG00000020385	-	68	100.000	ENSCHOG00000008325	-	100	67.273	Choloepus_hoffmanni
ENSANAG00000020385	-	82	98.592	ENSCPBG00000027774	-	84	90.000	Chrysemys_picta_bellii
ENSANAG00000020385	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSANAG00000020385	-	79	85.915	ENSGGOG00000003934	-	84	85.915	Gorilla_gorilla
ENSANAG00000020385	-	70	98.361	ENSGGOG00000038950	-	82	76.056	Gorilla_gorilla
ENSANAG00000020385	-	94	76.829	ENSGGOG00000043186	-	86	76.829	Gorilla_gorilla
ENSANAG00000020385	-	69	95.000	ENSLACG00000022567	-	59	93.548	Latimeria_chalumnae
ENSANAG00000020385	-	100	100.000	ENSMFAG00000039168	-	100	100.000	Macaca_fascicularis
ENSANAG00000020385	-	100	92.126	ENSMLEG00000033262	-	100	92.126	Mandrillus_leucophaeus
ENSANAG00000020385	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSANAG00000020385	-	89	87.013	ENSPTRG00000050290	-	87	87.013	Pan_troglodytes
ENSANAG00000020385	-	100	92.126	ENSPTRG00000019132	-	100	92.126	Pan_troglodytes
ENSANAG00000020385	-	69	85.000	ENSPTRG00000052689	-	95	58.451	Pan_troglodytes
ENSANAG00000020385	-	97	76.190	ENSPTRG00000028611	-	98	60.448	Pan_troglodytes
ENSANAG00000020385	-	100	100.000	ENSPANG00000015179	-	100	100.000	Papio_anubis
ENSANAG00000020385	-	100	88.976	ENSPKIG00000013014	-	100	88.976	Paramormyrops_kingsleyae
ENSANAG00000020385	-	89	92.373	ENSPCAG00000003269	-	65	97.391	Procavia_capensis
ENSANAG00000020385	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSANAG00000020385	-	100	100.000	ENSRROG00000035578	-	100	100.000	Rhinopithecus_roxellana
ENSANAG00000020385	-	70	98.876	ENSTTRG00000014846	-	100	77.622	Tursiops_truncatus
ENSANAG00000020385	-	89	70.755	ENSVPAG00000007077	-	63	74.545	Vicugna_pacos
ENSANAG00000020385	-	100	92.126	ENSVVUG00000023727	-	100	92.126	Vulpes_vulpes