EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000020573 (Gene tree)
Gene ID: 105721799
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3A
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 91851 bases
Position: chrKZ207552.1:2146304-2238154
Accession: 105721799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000004947	APOBEC_N	PF08210.11	4.3e-48	1	1
ENSANAP00000004950	APOBEC_N	PF08210.11	1.3e-47	1	1
ENSANAP00000004942	APOBEC_N	PF08210.11	1.8e-47	1	1
ENSANAP00000004947	APOBEC_C	PF05240.14	6.9e-32	1	1
ENSANAP00000004942	APOBEC_C	PF05240.14	6.5e-31	1	1
ENSANAP00000004950	APOBEC_C	PF05240.14	3.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000022700	-	1941	-	ENSANAP00000004942	199 (aa)	-	A0A2K5C8D7
ENSANAT00000022708	-	669	XM_012458974	ENSANAP00000004950	222 (aa)	XP_012314397	A0A2K5C8B7
ENSANAT00000022705	-	1941	XM_012458975	ENSANAP00000004947	199 (aa)	XP_012314398	A0A2K5C8E2

Gene Model

Click here to download ENSANAG00000020573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000020573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000020573	-	93	44.681	ENSANAG00000022438	AICDA	89	44.681
ENSANAG00000020573	-	95	66.316	ENSANAG00000031271	APOBEC3G	97	66.316
ENSANAG00000020573	-	88	61.446	ENSANAG00000027961	-	98	61.446
ENSANAG00000020573	-	94	60.000	ENSANAG00000028416	-	97	60.000
ENSANAG00000020573	-	90	30.270	ENSANAG00000026993	APOBEC2	77	30.270
ENSANAG00000020573	-	92	37.245	ENSANAG00000025410	APOBEC3H	81	37.245
ENSANAG00000020573	-	97	37.949	ENSANAG00000030088	-	95	39.487
ENSANAG00000020573	-	69	32.374	ENSANAG00000027743	APOBEC1	50	32.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000020573	-	93	63.978	ENSG00000239713	APOBEC3G	96	63.978	Homo_sapiens
ENSANAG00000020573	-	98	47.761	ENSAMEG00000010815	-	85	47.761	Ailuropoda_melanoleuca
ENSANAG00000020573	-	93	51.596	ENSBTAG00000037800	-	98	51.596	Bos_taurus
ENSANAG00000020573	-	94	87.766	ENSCJAG00000011578	-	79	86.224	Callithrix_jacchus
ENSANAG00000020573	-	98	64.894	ENSCJAG00000023368	APOBEC3G	99	64.894	Callithrix_jacchus
ENSANAG00000020573	-	63	52.000	ENSCAFG00000023589	-	89	52.000	Canis_familiaris
ENSANAG00000020573	-	97	42.929	ENSCAFG00000015211	-	97	42.929	Canis_familiaris
ENSANAG00000020573	-	98	45.500	ENSCAFG00020002641	-	84	46.970	Canis_lupus_dingo
ENSANAG00000020573	-	98	46.193	ENSCAFG00020002661	-	83	46.000	Canis_lupus_dingo
ENSANAG00000020573	-	99	47.739	ENSCHIG00000012694	-	90	48.128	Capra_hircus
ENSANAG00000020573	-	100	90.452	ENSCCAG00000030928	-	97	90.452	Cebus_capucinus
ENSANAG00000020573	-	94	67.553	ENSCCAG00000033147	-	93	67.553	Cebus_capucinus
ENSANAG00000020573	-	98	65.957	ENSCCAG00000032232	-	99	65.957	Cebus_capucinus
ENSANAG00000020573	-	95	55.263	ENSCCAG00000032509	-	98	55.263	Cebus_capucinus
ENSANAG00000020573	-	99	55.814	ENSCSAG00000006376	APOBEC3G	85	55.814	Chlorocebus_sabaeus
ENSANAG00000020573	-	94	58.929	ENSCANG00000029968	-	74	58.929	Colobus_angolensis_palliatus
ENSANAG00000020573	-	92	35.829	ENSDNOG00000039749	-	79	37.433	Dasypus_novemcinctus
ENSANAG00000020573	-	99	55.500	ENSEASG00005018643	-	84	55.500	Equus_asinus_asinus
ENSANAG00000020573	-	100	55.000	ENSECAG00000032756	-	68	55.000	Equus_caballus
ENSANAG00000020573	-	99	56.373	ENSECAG00000022371	APOBEC3Z1B	86	56.373	Equus_caballus
ENSANAG00000020573	-	93	60.795	ENSGGOG00000013750	APOBEC3G	94	60.795	Gorilla_gorilla
ENSANAG00000020573	-	94	52.660	ENSLAFG00000008890	-	90	52.660	Loxodonta_africana
ENSANAG00000020573	-	94	58.201	ENSLAFG00000005275	-	99	58.201	Loxodonta_africana
ENSANAG00000020573	-	94	56.915	ENSLAFG00000020906	-	92	56.915	Loxodonta_africana
ENSANAG00000020573	-	99	60.914	ENSMFAG00000044711	APOBEC3G	85	60.914	Macaca_fascicularis
ENSANAG00000020573	-	99	60.914	ENSMMUG00000039346	APOBEC3G	93	60.914	Macaca_mulatta
ENSANAG00000020573	-	99	60.914	ENSMNEG00000038847	APOBEC3G	94	60.606	Macaca_nemestrina
ENSANAG00000020573	-	99	59.391	ENSMLEG00000024444	APOBEC3G	92	59.391	Mandrillus_leucophaeus
ENSANAG00000020573	-	98	57.921	ENSMICG00000043748	-	99	57.921	Microcebus_murinus
ENSANAG00000020573	-	93	59.459	ENSMICG00000047191	-	98	59.459	Microcebus_murinus
ENSANAG00000020573	-	91	49.724	ENSMPUG00000013235	-	96	47.396	Mustela_putorius_furo
ENSANAG00000020573	-	94	47.396	ENSMLUG00000014565	-	100	47.396	Myotis_lucifugus
ENSANAG00000020573	-	88	47.727	ENSMLUG00000000517	-	98	47.727	Myotis_lucifugus
ENSANAG00000020573	-	97	46.632	ENSMLUG00000024957	-	88	46.632	Myotis_lucifugus
ENSANAG00000020573	-	95	43.386	ENSMLUG00000028652	-	83	43.229	Myotis_lucifugus
ENSANAG00000020573	-	97	49.223	ENSMLUG00000023022	-	86	49.223	Myotis_lucifugus
ENSANAG00000020573	-	97	50.000	ENSMLUG00000000977	-	97	50.000	Myotis_lucifugus
ENSANAG00000020573	-	92	57.851	ENSMLUG00000026771	-	73	57.851	Myotis_lucifugus
ENSANAG00000020573	-	55	50.909	ENSMLUG00000022226	-	81	50.909	Myotis_lucifugus
ENSANAG00000020573	-	94	60.938	ENSMLUG00000008631	-	97	60.938	Myotis_lucifugus
ENSANAG00000020573	-	95	54.887	ENSMLUG00000024853	-	99	54.887	Myotis_lucifugus
ENSANAG00000020573	-	92	62.791	ENSNLEG00000018922	-	95	62.791	Nomascus_leucogenys
ENSANAG00000020573	-	94	54.255	ENSOPRG00000002326	-	99	54.255	Ochotona_princeps
ENSANAG00000020573	-	98	52.632	ENSOCUG00000023532	-	90	47.881	Oryctolagus_cuniculus
ENSANAG00000020573	-	98	63.861	ENSOGAG00000024822	-	98	63.861	Otolemur_garnettii
ENSANAG00000020573	-	97	68.041	ENSOGAG00000032518	-	99	68.041	Otolemur_garnettii
ENSANAG00000020573	-	93	47.340	ENSOARG00000016213	APOBEC3Z1	98	47.340	Ovis_aries
ENSANAG00000020573	-	93	63.784	ENSPPAG00000033277	-	76	63.784	Pan_paniscus
ENSANAG00000020573	-	93	63.978	ENSPTRG00000014387	APOBEC3G	96	63.978	Pan_troglodytes
ENSANAG00000020573	-	96	60.733	ENSPPYG00000011833	APOBEC3G	91	60.733	Pongo_abelii
ENSANAG00000020573	-	64	58.594	ENSPCAG00000001848	-	93	58.594	Procavia_capensis
ENSANAG00000020573	-	95	54.255	ENSPCAG00000015518	-	77	54.255	Procavia_capensis
ENSANAG00000020573	-	93	57.219	ENSPCOG00000016357	-	99	55.392	Propithecus_coquereli
ENSANAG00000020573	-	99	52.525	ENSPVAG00000004045	-	98	52.525	Pteropus_vampyrus
ENSANAG00000020573	-	95	63.492	ENSRBIG00000035436	APOBEC3G	93	63.492	Rhinopithecus_bieti
ENSANAG00000020573	-	94	58.511	ENSSBOG00000025673	-	90	58.511	Saimiri_boliviensis_boliviensis
ENSANAG00000020573	-	100	90.955	ENSSBOG00000029091	-	97	90.955	Saimiri_boliviensis_boliviensis
ENSANAG00000020573	-	95	64.211	ENSSBOG00000026566	-	97	64.211	Saimiri_boliviensis_boliviensis
ENSANAG00000020573	-	97	69.681	ENSSBOG00000021384	-	98	69.681	Saimiri_boliviensis_boliviensis
ENSANAG00000020573	-	93	66.667	ENSSBOG00000023468	-	77	66.667	Saimiri_boliviensis_boliviensis
ENSANAG00000020573	-	95	74.211	ENSSBOG00000018208	-	99	74.211	Saimiri_boliviensis_boliviensis
ENSANAG00000020573	-	96	51.546	ENSTTRG00000009395	-	95	51.546	Tursiops_truncatus
ENSANAG00000020573	-	99	46.569	ENSUMAG00000014447	-	99	46.569	Ursus_maritimus
ENSANAG00000020573	-	98	46.766	ENSUMAG00000002249	-	91	46.766	Ursus_maritimus
ENSANAG00000020573	-	62	40.000	ENSVVUG00000022583	-	61	40.299	Vulpes_vulpes