EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000020616 (Gene tree)
Gene ID: 105721015
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 16323 bases
Position: chrKZ201810.1:11873746-11890068
Accession: 105721015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000005028	zf-C2H2	PF00096.26	1e-12	1	2
ENSANAP00000005028	zf-C2H2	PF00096.26	1e-12	2	2
ENSANAP00000005028	zf-met	PF12874.7	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000022786	PRDM12-201	1020	XM_021674014	ENSANAP00000005028	340 (aa)	XP_021529689	A0A2K5C8J5

Gene Model

Click here to download ENSANAG00000020616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000020616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000020616	PRDM12	100	99.706	ENSG00000130711	PRDM12	93	99.706	Homo_sapiens
ENSANAG00000020616	PRDM12	99	65.156	ENSAPOG00000018234	-	96	65.439	Acanthochromis_polyacanthus
ENSANAG00000020616	PRDM12	97	79.202	ENSAPOG00000016051	prdm12b	94	77.778	Acanthochromis_polyacanthus
ENSANAG00000020616	PRDM12	95	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSANAG00000020616	PRDM12	97	79.539	ENSACIG00000019578	prdm12b	94	78.873	Amphilophus_citrinellus
ENSANAG00000020616	PRDM12	99	77.961	ENSACIG00000005193	-	96	77.961	Amphilophus_citrinellus
ENSANAG00000020616	PRDM12	97	80.403	ENSAOCG00000015040	prdm12b	94	79.213	Amphiprion_ocellaris
ENSANAG00000020616	PRDM12	97	81.105	ENSAPEG00000015092	prdm12b	94	79.887	Amphiprion_percula
ENSANAG00000020616	PRDM12	96	79.762	ENSAPEG00000022849	-	89	78.655	Amphiprion_percula
ENSANAG00000020616	PRDM12	99	80.702	ENSATEG00000014595	-	99	80.702	Anabas_testudineus
ENSANAG00000020616	PRDM12	99	81.287	ENSACLG00000011876	prdm12b	94	81.287	Astatotilapia_calliptera
ENSANAG00000020616	PRDM12	95	80.994	ENSACLG00000007631	-	87	80.994	Astatotilapia_calliptera
ENSANAG00000020616	PRDM12	99	82.006	ENSAMXG00000008540	PRDM12	93	82.006	Astyanax_mexicanus
ENSANAG00000020616	PRDM12	96	87.725	ENSAMXG00000033665	prdm12b	94	85.960	Astyanax_mexicanus
ENSANAG00000020616	PRDM12	100	99.118	ENSBTAG00000023797	PRDM12	94	99.118	Bos_taurus
ENSANAG00000020616	PRDM12	100	100.000	ENSCJAG00000020540	PRDM12	94	100.000	Callithrix_jacchus
ENSANAG00000020616	PRDM12	87	98.316	ENSCAFG00000023076	PRDM12	92	98.316	Canis_familiaris
ENSANAG00000020616	PRDM12	100	99.412	ENSCAFG00020024046	PRDM12	93	99.412	Canis_lupus_dingo
ENSANAG00000020616	PRDM12	100	99.412	ENSCHIG00000025005	PRDM12	94	99.412	Capra_hircus
ENSANAG00000020616	PRDM12	100	91.765	ENSCPOG00000005901	PRDM12	100	91.765	Cavia_porcellus
ENSANAG00000020616	PRDM12	100	100.000	ENSCCAG00000037485	PRDM12	94	100.000	Cebus_capucinus
ENSANAG00000020616	PRDM12	100	100.000	ENSCATG00000020327	PRDM12	94	100.000	Cercocebus_atys
ENSANAG00000020616	PRDM12	98	97.305	ENSCLAG00000005499	PRDM12	92	97.305	Chinchilla_lanigera
ENSANAG00000020616	PRDM12	100	100.000	ENSCSAG00000014756	PRDM12	93	100.000	Chlorocebus_sabaeus
ENSANAG00000020616	PRDM12	100	92.647	ENSCPBG00000022628	PRDM12	96	92.647	Chrysemys_picta_bellii
ENSANAG00000020616	PRDM12	100	98.529	ENSCGRG00001015005	Prdm12	93	98.529	Cricetulus_griseus_chok1gshd
ENSANAG00000020616	PRDM12	96	82.544	ENSCVAG00000017166	prdm12b	94	80.802	Cyprinodon_variegatus
ENSANAG00000020616	PRDM12	96	77.493	ENSCVAG00000000944	-	90	77.493	Cyprinodon_variegatus
ENSANAG00000020616	PRDM12	99	85.260	ENSDARG00000007430	prdm12b	95	85.260	Danio_rerio
ENSANAG00000020616	PRDM12	99	98.529	ENSDNOG00000042302	PRDM12	94	98.529	Dasypus_novemcinctus
ENSANAG00000020616	PRDM12	95	62.963	ENSEBUG00000016780	prdm12b	78	64.387	Eptatretus_burgeri
ENSANAG00000020616	PRDM12	100	99.118	ENSEASG00005008472	PRDM12	94	99.118	Equus_asinus_asinus
ENSANAG00000020616	PRDM12	100	98.824	ENSECAG00000005933	PRDM12	94	98.824	Equus_caballus
ENSANAG00000020616	PRDM12	95	83.025	ENSELUG00000013674	PRDM12	89	83.025	Esox_lucius
ENSANAG00000020616	PRDM12	99	84.330	ENSELUG00000009905	prdm12b	95	84.330	Esox_lucius
ENSANAG00000020616	PRDM12	100	99.412	ENSFCAG00000043086	PRDM12	94	99.412	Felis_catus
ENSANAG00000020616	PRDM12	100	92.941	ENSFALG00000001445	PRDM12	86	92.941	Ficedula_albicollis
ENSANAG00000020616	PRDM12	96	79.009	ENSFHEG00000007746	-	88	79.941	Fundulus_heteroclitus
ENSANAG00000020616	PRDM12	95	82.789	ENSFHEG00000003944	prdm12b	94	80.398	Fundulus_heteroclitus
ENSANAG00000020616	PRDM12	98	81.982	ENSGMOG00000011797	prdm12b	96	80.882	Gadus_morhua
ENSANAG00000020616	PRDM12	100	92.941	ENSGALG00000003895	PRDM12	96	92.941	Gallus_gallus
ENSANAG00000020616	PRDM12	98	82.596	ENSGAFG00000010827	prdm12b	93	81.429	Gambusia_affinis
ENSANAG00000020616	PRDM12	100	81.089	ENSGACG00000016713	prdm12b	94	81.089	Gasterosteus_aculeatus
ENSANAG00000020616	PRDM12	100	92.941	ENSGAGG00000014083	PRDM12	96	92.941	Gopherus_agassizii
ENSANAG00000020616	PRDM12	100	99.412	ENSGGOG00000010568	PRDM12	93	99.412	Gorilla_gorilla
ENSANAG00000020616	PRDM12	95	80.994	ENSHBUG00000022537	-	80	80.994	Haplochromis_burtoni
ENSANAG00000020616	PRDM12	99	79.603	ENSHBUG00000022878	prdm12b	94	80.453	Haplochromis_burtoni
ENSANAG00000020616	PRDM12	100	97.059	ENSHGLG00000013939	PRDM12	93	97.059	Heterocephalus_glaber_female
ENSANAG00000020616	PRDM12	98	75.953	ENSHCOG00000021167	-	95	75.953	Hippocampus_comes
ENSANAG00000020616	PRDM12	95	80.702	ENSHCOG00000003663	prdm12b	93	77.686	Hippocampus_comes
ENSANAG00000020616	PRDM12	99	79.009	ENSIPUG00000019544	PRDM12	94	79.009	Ictalurus_punctatus
ENSANAG00000020616	PRDM12	96	87.126	ENSIPUG00000017053	prdm12b	94	85.303	Ictalurus_punctatus
ENSANAG00000020616	PRDM12	99	98.817	ENSSTOG00000005986	PRDM12	88	98.817	Ictidomys_tridecemlineatus
ENSANAG00000020616	PRDM12	97	98.485	ENSJJAG00000005424	Prdm12	100	98.485	Jaculus_jaculus
ENSANAG00000020616	PRDM12	94	81.040	ENSKMAG00000021205	-	92	81.040	Kryptolebias_marmoratus
ENSANAG00000020616	PRDM12	96	77.562	ENSKMAG00000016921	prdm12b	93	75.200	Kryptolebias_marmoratus
ENSANAG00000020616	PRDM12	95	83.832	ENSLBEG00000017769	prdm12b	92	81.375	Labrus_bergylta
ENSANAG00000020616	PRDM12	95	81.009	ENSLBEG00000007776	-	89	81.306	Labrus_bergylta
ENSANAG00000020616	PRDM12	99	89.971	ENSLACG00000017560	PRDM12	96	89.971	Latimeria_chalumnae
ENSANAG00000020616	PRDM12	98	86.431	ENSLOCG00000005429	prdm12b	94	86.297	Lepisosteus_oculatus
ENSANAG00000020616	PRDM12	100	97.688	ENSLAFG00000006979	PRDM12	93	97.688	Loxodonta_africana
ENSANAG00000020616	PRDM12	100	100.000	ENSMFAG00000040322	PRDM12	93	100.000	Macaca_fascicularis
ENSANAG00000020616	PRDM12	100	100.000	ENSMNEG00000037234	PRDM12	94	100.000	Macaca_nemestrina
ENSANAG00000020616	PRDM12	95	80.952	ENSMAMG00000018988	-	86	80.952	Mastacembelus_armatus
ENSANAG00000020616	PRDM12	96	82.111	ENSMAMG00000013212	prdm12b	94	80.398	Mastacembelus_armatus
ENSANAG00000020616	PRDM12	95	80.994	ENSMZEG00005000415	PRDM12	86	80.994	Maylandia_zebra
ENSANAG00000020616	PRDM12	100	92.941	ENSMGAG00000005438	PRDM12	96	92.941	Meleagris_gallopavo
ENSANAG00000020616	PRDM12	100	98.235	ENSMAUG00000013040	Prdm12	93	98.235	Mesocricetus_auratus
ENSANAG00000020616	PRDM12	99	99.410	ENSMICG00000015480	PRDM12	94	99.410	Microcebus_murinus
ENSANAG00000020616	PRDM12	100	98.235	ENSMOCG00000021026	Prdm12	93	98.235	Microtus_ochrogaster
ENSANAG00000020616	PRDM12	100	95.000	ENSMODG00000012108	PRDM12	96	95.000	Monodelphis_domestica
ENSANAG00000020616	PRDM12	99	68.966	ENSMALG00000021901	prdm12b	93	68.966	Monopterus_albus
ENSANAG00000020616	PRDM12	100	98.235	MGP_CAROLIEiJ_G0023414	Prdm12	93	98.235	Mus_caroli
ENSANAG00000020616	PRDM12	100	98.235	ENSMUSG00000079466	Prdm12	93	98.235	Mus_musculus
ENSANAG00000020616	PRDM12	100	98.235	MGP_PahariEiJ_G0024871	Prdm12	93	98.235	Mus_pahari
ENSANAG00000020616	PRDM12	100	98.235	MGP_SPRETEiJ_G0024331	Prdm12	93	98.235	Mus_spretus
ENSANAG00000020616	PRDM12	100	96.176	ENSNGAG00000018480	Prdm12	95	96.176	Nannospalax_galili
ENSANAG00000020616	PRDM12	97	76.023	ENSNBRG00000024312	-	95	76.316	Neolamprologus_brichardi
ENSANAG00000020616	PRDM12	97	79.885	ENSNBRG00000006727	prdm12b	94	79.775	Neolamprologus_brichardi
ENSANAG00000020616	PRDM12	100	84.412	ENSMEUG00000003828	PRDM12	96	84.412	Notamacropus_eugenii
ENSANAG00000020616	PRDM12	97	98.182	ENSOPRG00000008680	PRDM12	100	98.182	Ochotona_princeps
ENSANAG00000020616	PRDM12	100	97.941	ENSODEG00000016282	PRDM12	64	97.941	Octodon_degus
ENSANAG00000020616	PRDM12	60	95.567	ENSOANG00000001043	PRDM12	94	95.567	Ornithorhynchus_anatinus
ENSANAG00000020616	PRDM12	92	92.971	ENSOCUG00000008241	PRDM12	100	92.971	Oryctolagus_cuniculus
ENSANAG00000020616	PRDM12	95	79.472	ENSORLG00000017558	-	87	80.059	Oryzias_latipes
ENSANAG00000020616	PRDM12	100	79.330	ENSORLG00000007114	prdm12b	94	79.888	Oryzias_latipes
ENSANAG00000020616	PRDM12	97	80.403	ENSORLG00020019565	prdm12b	94	79.609	Oryzias_latipes_hni
ENSANAG00000020616	PRDM12	95	79.240	ENSORLG00020013167	-	87	79.825	Oryzias_latipes_hni
ENSANAG00000020616	PRDM12	95	79.472	ENSORLG00015003435	-	87	80.059	Oryzias_latipes_hsok
ENSANAG00000020616	PRDM12	97	80.115	ENSORLG00015007621	prdm12b	94	79.330	Oryzias_latipes_hsok
ENSANAG00000020616	PRDM12	99	79.155	ENSOMEG00000004134	prdm12b	94	78.670	Oryzias_melastigma
ENSANAG00000020616	PRDM12	99	76.519	ENSOMEG00000007762	-	97	76.796	Oryzias_melastigma
ENSANAG00000020616	PRDM12	98	99.399	ENSOGAG00000007557	PRDM12	100	99.399	Otolemur_garnettii
ENSANAG00000020616	PRDM12	84	99.303	ENSPPAG00000031506	-	97	99.303	Pan_paniscus
ENSANAG00000020616	PRDM12	100	90.909	ENSPPRG00000023024	PRDM12	87	90.909	Panthera_pardus
ENSANAG00000020616	PRDM12	100	99.706	ENSPTRG00000043324	-	93	99.706	Pan_troglodytes
ENSANAG00000020616	PRDM12	100	99.706	ENSPTRG00000021475	PRDM12	93	99.706	Pan_troglodytes
ENSANAG00000020616	PRDM12	100	100.000	ENSPANG00000025967	PRDM12	94	100.000	Papio_anubis
ENSANAG00000020616	PRDM12	98	85.057	ENSPKIG00000007228	prdm12b	95	84.943	Paramormyrops_kingsleyae
ENSANAG00000020616	PRDM12	100	78.000	ENSPKIG00000004305	PRDM12	99	78.286	Paramormyrops_kingsleyae
ENSANAG00000020616	PRDM12	100	92.059	ENSPSIG00000006739	PRDM12	96	92.059	Pelodiscus_sinensis
ENSANAG00000020616	PRDM12	97	82.544	ENSPMGG00000008867	prdm12b	94	81.089	Periophthalmus_magnuspinnatus
ENSANAG00000020616	PRDM12	97	81.250	ENSPMGG00000002356	-	88	81.250	Periophthalmus_magnuspinnatus
ENSANAG00000020616	PRDM12	98	98.494	ENSPEMG00000009969	Prdm12	95	94.556	Peromyscus_maniculatus_bairdii
ENSANAG00000020616	PRDM12	100	95.294	ENSPCIG00000024119	PRDM12	96	95.294	Phascolarctos_cinereus
ENSANAG00000020616	PRDM12	99	81.429	ENSPFOG00000019841	prdm12b	94	81.429	Poecilia_formosa
ENSANAG00000020616	PRDM12	97	83.333	ENSPLAG00000016626	prdm12b	92	81.556	Poecilia_latipinna
ENSANAG00000020616	PRDM12	95	82.371	ENSPMEG00000016698	prdm12b	92	81.009	Poecilia_mexicana
ENSANAG00000020616	PRDM12	96	76.331	ENSPREG00000003211	-	93	76.331	Poecilia_reticulata
ENSANAG00000020616	PRDM12	97	83.186	ENSPREG00000015073	prdm12b	92	81.429	Poecilia_reticulata
ENSANAG00000020616	PRDM12	100	98.824	ENSPPYG00000019694	PRDM12	97	98.824	Pongo_abelii
ENSANAG00000020616	PRDM12	100	99.412	ENSPCOG00000022255	PRDM12	93	99.412	Propithecus_coquereli
ENSANAG00000020616	PRDM12	100	99.118	ENSPVAG00000001511	PRDM12	93	99.118	Pteropus_vampyrus
ENSANAG00000020616	PRDM12	99	78.873	ENSPNYG00000009607	prdm12b	94	79.718	Pundamilia_nyererei
ENSANAG00000020616	PRDM12	95	80.994	ENSPNYG00000013589	-	86	80.994	Pundamilia_nyererei
ENSANAG00000020616	PRDM12	96	88.323	ENSPNAG00000024532	prdm12b	94	86.744	Pygocentrus_nattereri
ENSANAG00000020616	PRDM12	95	80.606	ENSPNAG00000013396	PRDM12	92	78.261	Pygocentrus_nattereri
ENSANAG00000020616	PRDM12	100	98.235	ENSRNOG00000009218	Prdm12	93	98.235	Rattus_norvegicus
ENSANAG00000020616	PRDM12	100	93.696	ENSRBIG00000042712	PRDM12	96	93.696	Rhinopithecus_bieti
ENSANAG00000020616	PRDM12	94	100.000	ENSRROG00000043554	PRDM12	100	100.000	Rhinopithecus_roxellana
ENSANAG00000020616	PRDM12	100	94.428	ENSSHAG00000015972	PRDM12	96	94.428	Sarcophilus_harrisii
ENSANAG00000020616	PRDM12	96	79.096	ENSSMAG00000003754	prdm12b	93	77.901	Scophthalmus_maximus
ENSANAG00000020616	PRDM12	99	81.105	ENSSDUG00000019071	-	95	81.105	Seriola_dumerili
ENSANAG00000020616	PRDM12	99	78.393	ENSSDUG00000023498	prdm12b	94	78.393	Seriola_dumerili
ENSANAG00000020616	PRDM12	95	84.049	ENSSLDG00000013562	-	93	84.049	Seriola_lalandi_dorsalis
ENSANAG00000020616	PRDM12	99	78.771	ENSSLDG00000009557	prdm12b	94	78.771	Seriola_lalandi_dorsalis
ENSANAG00000020616	PRDM12	100	92.353	ENSSPUG00000013424	PRDM12	96	92.353	Sphenodon_punctatus
ENSANAG00000020616	PRDM12	95	81.287	ENSSPAG00000018824	prdm12b	94	79.272	Stegastes_partitus
ENSANAG00000020616	PRDM12	95	71.976	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSANAG00000020616	PRDM12	100	99.412	ENSSSCG00000005703	PRDM12	93	99.412	Sus_scrofa
ENSANAG00000020616	PRDM12	97	82.544	ENSTRUG00000018659	prdm12b	94	81.268	Takifugu_rubripes
ENSANAG00000020616	PRDM12	95	81.325	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSANAG00000020616	PRDM12	97	83.186	ENSTNIG00000009020	prdm12b	93	81.609	Tetraodon_nigroviridis
ENSANAG00000020616	PRDM12	99	76.989	ENSTNIG00000005859	-	99	76.989	Tetraodon_nigroviridis
ENSANAG00000020616	PRDM12	100	98.529	ENSUAMG00000009653	PRDM12	94	98.529	Ursus_americanus
ENSANAG00000020616	PRDM12	98	99.398	ENSVVUG00000027662	PRDM12	79	99.398	Vulpes_vulpes
ENSANAG00000020616	PRDM12	97	83.036	ENSXCOG00000002836	prdm12b	93	81.268	Xiphophorus_couchianus
ENSANAG00000020616	PRDM12	96	80.000	ENSXMAG00000028012	-	88	80.000	Xiphophorus_maculatus
ENSANAG00000020616	PRDM12	96	82.544	ENSXMAG00000005537	prdm12b	93	80.802	Xiphophorus_maculatus