EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000021554 (Gene tree)
Gene ID: 105718072
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 97288 bases
Position: chrKZ199586.1:13419574-13516861
Accession: 105718072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000007186	Ago_hook	PF10427.9	2.9e-21	1	1
ENSANAP00000007192	Ago_hook	PF10427.9	3.2e-21	1	1
ENSANAP00000007213	Ago_hook	PF10427.9	3.2e-21	1	1
ENSANAP00000007200	Ago_hook	PF10427.9	5.1e-21	1	1
ENSANAP00000007200	RRM_1	PF00076.22	0.00032	1	1
ENSANAP00000007213	RRM_1	PF00076.22	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000024968	TNRC6C-202	5802	-	ENSANAP00000007192	1933 (aa)	-	A0A2K5CEE7
ENSANAT00000024962	TNRC6C-201	5829	XM_012453614	ENSANAP00000007186	1942 (aa)	XP_012309037	A0A2K5CEX1
ENSANAT00000024976	TNRC6C-203	5552	-	ENSANAP00000007200	1668 (aa)	-	A0A2K5CET2
ENSANAT00000024989	TNRC6C-204	5067	-	ENSANAP00000007213	1688 (aa)	-	A0A2K5CES7

Gene Model

Click here to download ENSANAG00000021554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000021554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000021554	TNRC6C	99	37.283	ENSANAG00000035042	TNRC6B	89	53.012
ENSANAG00000021554	TNRC6C	99	42.731	ENSANAG00000025252	TNRC6A	97	50.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000021554	TNRC6C	100	98.354	ENSG00000078687	TNRC6C	100	98.947	Homo_sapiens
ENSANAG00000021554	TNRC6C	80	54.506	ENSAPOG00000019749	tnrc6c1	98	49.079	Acanthochromis_polyacanthus
ENSANAG00000021554	TNRC6C	100	87.014	ENSAMEG00000013756	TNRC6C	99	88.628	Ailuropoda_melanoleuca
ENSANAG00000021554	TNRC6C	91	52.885	ENSACIG00000008075	tnrc6c1	98	54.545	Amphilophus_citrinellus
ENSANAG00000021554	TNRC6C	77	68.800	ENSAOCG00000023968	tnrc6c1	99	49.055	Amphiprion_ocellaris
ENSANAG00000021554	TNRC6C	80	54.354	ENSAPEG00000009020	tnrc6c1	99	48.952	Amphiprion_percula
ENSANAG00000021554	TNRC6C	99	86.150	ENSAPLG00000005456	TNRC6C	100	86.009	Anas_platyrhynchos
ENSANAG00000021554	TNRC6C	99	86.352	ENSACAG00000016198	TNRC6C	98	86.406	Anolis_carolinensis
ENSANAG00000021554	TNRC6C	93	48.470	ENSACLG00000000424	tnrc6c1	99	48.238	Astatotilapia_calliptera
ENSANAG00000021554	TNRC6C	100	87.596	ENSBTAG00000018658	TNRC6C	100	87.596	Bos_taurus
ENSANAG00000021554	TNRC6C	100	98.919	ENSCJAG00000019431	TNRC6C	100	98.919	Callithrix_jacchus
ENSANAG00000021554	TNRC6C	99	90.635	ENSCAFG00000005224	TNRC6C	99	90.687	Canis_familiaris
ENSANAG00000021554	TNRC6C	100	90.583	ENSCAFG00020006661	TNRC6C	99	91.080	Canis_lupus_dingo
ENSANAG00000021554	TNRC6C	100	87.160	ENSCHIG00000026004	TNRC6C	100	85.412	Capra_hircus
ENSANAG00000021554	TNRC6C	100	93.171	ENSTSYG00000005403	TNRC6C	100	94.922	Carlito_syrichta
ENSANAG00000021554	TNRC6C	100	84.353	ENSCAPG00000007307	TNRC6C	99	83.342	Cavia_aperea
ENSANAG00000021554	TNRC6C	100	89.816	ENSCPOG00000000467	TNRC6C	100	87.605	Cavia_porcellus
ENSANAG00000021554	TNRC6C	100	99.053	ENSCCAG00000030524	TNRC6C	100	99.053	Cebus_capucinus
ENSANAG00000021554	TNRC6C	100	98.046	ENSCATG00000033135	TNRC6C	100	98.046	Cercocebus_atys
ENSANAG00000021554	TNRC6C	100	92.599	ENSCLAG00000011139	TNRC6C	99	89.740	Chinchilla_lanigera
ENSANAG00000021554	TNRC6C	100	97.684	ENSCSAG00000005167	TNRC6C	100	97.684	Chlorocebus_sabaeus
ENSANAG00000021554	TNRC6C	75	91.733	ENSCHOG00000000088	TNRC6C	72	90.851	Choloepus_hoffmanni
ENSANAG00000021554	TNRC6C	100	87.478	ENSCPBG00000027960	TNRC6C	100	87.478	Chrysemys_picta_bellii
ENSANAG00000021554	TNRC6C	100	97.633	ENSCANG00000041771	TNRC6C	100	97.633	Colobus_angolensis_palliatus
ENSANAG00000021554	TNRC6C	100	89.334	ENSCGRG00001022686	Tnrc6c	100	87.920	Cricetulus_griseus_chok1gshd
ENSANAG00000021554	TNRC6C	100	89.757	ENSCGRG00000018041	Tnrc6c	100	87.920	Cricetulus_griseus_crigri
ENSANAG00000021554	TNRC6C	94	49.487	ENSCSEG00000012744	tnrc6c1	98	45.811	Cynoglossus_semilaevis
ENSANAG00000021554	TNRC6C	100	53.239	ENSDARG00000076847	tnrc6c1	99	53.742	Danio_rerio
ENSANAG00000021554	TNRC6C	100	88.453	ENSDNOG00000003247	TNRC6C	99	88.773	Dasypus_novemcinctus
ENSANAG00000021554	TNRC6C	100	85.697	ENSDORG00000004558	Tnrc6c	100	85.227	Dipodomys_ordii
ENSANAG00000021554	TNRC6C	90	83.217	ENSETEG00000005527	TNRC6C	86	83.803	Echinops_telfairi
ENSANAG00000021554	TNRC6C	100	90.828	ENSEASG00005004799	TNRC6C	100	90.592	Equus_asinus_asinus
ENSANAG00000021554	TNRC6C	100	90.828	ENSECAG00000012486	TNRC6C	99	90.031	Equus_caballus
ENSANAG00000021554	TNRC6C	96	91.312	ENSEEUG00000010008	TNRC6C	96	91.864	Erinaceus_europaeus
ENSANAG00000021554	TNRC6C	100	88.777	ENSFCAG00000028358	TNRC6C	100	88.777	Felis_catus
ENSANAG00000021554	TNRC6C	100	83.918	ENSFALG00000000848	TNRC6C	100	85.432	Ficedula_albicollis
ENSANAG00000021554	TNRC6C	100	91.060	ENSFDAG00000010368	TNRC6C	100	89.119	Fukomys_damarensis
ENSANAG00000021554	TNRC6C	89	70.511	ENSFHEG00000002936	tnrc6c1	99	45.812	Fundulus_heteroclitus
ENSANAG00000021554	TNRC6C	100	88.225	ENSGALG00000001725	TNRC6C	100	87.988	Gallus_gallus
ENSANAG00000021554	TNRC6C	100	48.369	ENSGAFG00000019019	tnrc6c1	100	48.758	Gambusia_affinis
ENSANAG00000021554	TNRC6C	95	52.701	ENSGACG00000012320	tnrc6c1	97	47.914	Gasterosteus_aculeatus
ENSANAG00000021554	TNRC6C	100	86.895	ENSGAGG00000022043	TNRC6C	99	87.045	Gopherus_agassizii
ENSANAG00000021554	TNRC6C	100	97.737	ENSGGOG00000011304	TNRC6C	100	97.737	Gorilla_gorilla
ENSANAG00000021554	TNRC6C	98	49.238	ENSHBUG00000010846	tnrc6c1	99	48.360	Haplochromis_burtoni
ENSANAG00000021554	TNRC6C	100	92.303	ENSHGLG00000004809	TNRC6C	99	89.328	Heterocephalus_glaber_female
ENSANAG00000021554	TNRC6C	100	91.338	ENSHGLG00100012597	TNRC6C	99	89.537	Heterocephalus_glaber_male
ENSANAG00000021554	TNRC6C	99	50.814	ENSIPUG00000000818	tnrc6c1	98	51.911	Ictalurus_punctatus
ENSANAG00000021554	TNRC6C	100	91.307	ENSSTOG00000009101	TNRC6C	100	88.627	Ictidomys_tridecemlineatus
ENSANAG00000021554	TNRC6C	100	88.627	ENSJJAG00000017055	Tnrc6c	99	86.524	Jaculus_jaculus
ENSANAG00000021554	TNRC6C	99	48.305	ENSKMAG00000021023	tnrc6c1	100	50.806	Kryptolebias_marmoratus
ENSANAG00000021554	TNRC6C	100	75.763	ENSLACG00000015283	TNRC6C	100	74.124	Latimeria_chalumnae
ENSANAG00000021554	TNRC6C	99	56.561	ENSLOCG00000013377	tnrc6c1	99	55.436	Lepisosteus_oculatus
ENSANAG00000021554	TNRC6C	100	90.395	ENSLAFG00000011122	TNRC6C	99	88.594	Loxodonta_africana
ENSANAG00000021554	TNRC6C	100	98.165	ENSMFAG00000043943	TNRC6C	100	98.165	Macaca_fascicularis
ENSANAG00000021554	TNRC6C	100	98.165	ENSMMUG00000011924	TNRC6C	100	98.165	Macaca_mulatta
ENSANAG00000021554	TNRC6C	100	98.203	ENSMNEG00000030405	TNRC6C	100	98.147	Macaca_nemestrina
ENSANAG00000021554	TNRC6C	100	98.147	ENSMLEG00000033436	TNRC6C	100	98.147	Mandrillus_leucophaeus
ENSANAG00000021554	TNRC6C	95	52.997	ENSMAMG00000023613	tnrc6c1	100	50.833	Mastacembelus_armatus
ENSANAG00000021554	TNRC6C	98	50.563	ENSMZEG00005010920	tnrc6c1	99	48.238	Maylandia_zebra
ENSANAG00000021554	TNRC6C	99	80.114	ENSMGAG00000003906	TNRC6C	100	80.196	Meleagris_gallopavo
ENSANAG00000021554	TNRC6C	100	89.275	ENSMAUG00000021618	Tnrc6c	100	88.863	Mesocricetus_auratus
ENSANAG00000021554	TNRC6C	100	93.961	ENSMICG00000003952	TNRC6C	100	93.546	Microcebus_murinus
ENSANAG00000021554	TNRC6C	100	91.297	ENSMOCG00000015879	Tnrc6c	100	88.559	Microtus_ochrogaster
ENSANAG00000021554	TNRC6C	93	55.299	ENSMMOG00000005203	tnrc6c1	100	50.594	Mola_mola
ENSANAG00000021554	TNRC6C	100	86.816	ENSMODG00000001785	TNRC6C	99	85.120	Monodelphis_domestica
ENSANAG00000021554	TNRC6C	100	91.060	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.334	Mus_caroli
ENSANAG00000021554	TNRC6C	100	90.823	ENSMUSG00000025571	Tnrc6c	100	88.110	Mus_musculus
ENSANAG00000021554	TNRC6C	100	90.705	MGP_PahariEiJ_G0018593	Tnrc6c	100	87.998	Mus_pahari
ENSANAG00000021554	TNRC6C	100	90.882	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.166	Mus_spretus
ENSANAG00000021554	TNRC6C	99	88.410	ENSMPUG00000013348	TNRC6C	98	88.450	Mustela_putorius_furo
ENSANAG00000021554	TNRC6C	100	81.182	ENSMLUG00000014431	TNRC6C	98	81.481	Myotis_lucifugus
ENSANAG00000021554	TNRC6C	100	90.454	ENSNGAG00000012203	Tnrc6c	99	88.698	Nannospalax_galili
ENSANAG00000021554	TNRC6C	91	53.461	ENSNBRG00000005344	tnrc6c1	99	48.808	Neolamprologus_brichardi
ENSANAG00000021554	TNRC6C	99	95.766	ENSNLEG00000000047	TNRC6C	99	95.766	Nomascus_leucogenys
ENSANAG00000021554	TNRC6C	97	81.565	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSANAG00000021554	TNRC6C	100	91.652	ENSODEG00000012499	TNRC6C	100	91.533	Octodon_degus
ENSANAG00000021554	TNRC6C	94	51.251	ENSONIG00000002210	tnrc6c1	96	51.729	Oreochromis_niloticus
ENSANAG00000021554	TNRC6C	99	63.589	ENSOANG00000009758	-	100	61.091	Ornithorhynchus_anatinus
ENSANAG00000021554	TNRC6C	84	80.153	ENSOCUG00000006122	TNRC6C	95	77.878	Oryctolagus_cuniculus
ENSANAG00000021554	TNRC6C	91	50.275	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSANAG00000021554	TNRC6C	91	50.214	ENSORLG00020016510	tnrc6c1	100	49.087	Oryzias_latipes_hni
ENSANAG00000021554	TNRC6C	72	45.277	ENSORLG00015000171	tnrc6c1	98	44.529	Oryzias_latipes_hsok
ENSANAG00000021554	TNRC6C	91	50.889	ENSOMEG00000000357	tnrc6c1	99	48.062	Oryzias_melastigma
ENSANAG00000021554	TNRC6C	100	90.451	ENSOGAG00000007197	TNRC6C	100	91.748	Otolemur_garnettii
ENSANAG00000021554	TNRC6C	95	84.461	ENSOARG00000006041	TNRC6C	97	84.506	Ovis_aries
ENSANAG00000021554	TNRC6C	100	97.987	ENSPPAG00000027160	TNRC6C	100	97.987	Pan_paniscus
ENSANAG00000021554	TNRC6C	100	88.777	ENSPPRG00000018881	TNRC6C	100	88.777	Panthera_pardus
ENSANAG00000021554	TNRC6C	90	86.463	ENSPTIG00000008791	TNRC6C	69	72.862	Panthera_tigris_altaica
ENSANAG00000021554	TNRC6C	100	98.250	ENSPTRG00000009699	TNRC6C	100	98.250	Pan_troglodytes
ENSANAG00000021554	TNRC6C	100	98.147	ENSPANG00000019994	TNRC6C	100	98.147	Papio_anubis
ENSANAG00000021554	TNRC6C	59	62.027	ENSPKIG00000005428	tnrc6c1	100	51.103	Paramormyrops_kingsleyae
ENSANAG00000021554	TNRC6C	100	85.985	ENSPSIG00000018069	TNRC6C	100	83.613	Pelodiscus_sinensis
ENSANAG00000021554	TNRC6C	79	54.194	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSANAG00000021554	TNRC6C	100	90.395	ENSPEMG00000009785	Tnrc6c	100	87.684	Peromyscus_maniculatus_bairdii
ENSANAG00000021554	TNRC6C	58	86.303	ENSPCIG00000017421	-	99	86.303	Phascolarctos_cinereus
ENSANAG00000021554	TNRC6C	100	48.321	ENSPFOG00000012560	tnrc6c1	97	56.535	Poecilia_formosa
ENSANAG00000021554	TNRC6C	100	48.487	ENSPLAG00000021055	tnrc6c1	100	49.580	Poecilia_latipinna
ENSANAG00000021554	TNRC6C	100	98.147	ENSPPYG00000008679	TNRC6C	99	98.147	Pongo_abelii
ENSANAG00000021554	TNRC6C	93	92.180	ENSPCAG00000012510	TNRC6C	91	92.180	Procavia_capensis
ENSANAG00000021554	TNRC6C	100	94.435	ENSPCOG00000021451	TNRC6C	100	94.139	Propithecus_coquereli
ENSANAG00000021554	TNRC6C	96	88.392	ENSPVAG00000002008	TNRC6C	95	88.136	Pteropus_vampyrus
ENSANAG00000021554	TNRC6C	100	47.911	ENSPNYG00000014477	tnrc6c1	99	47.998	Pundamilia_nyererei
ENSANAG00000021554	TNRC6C	100	90.124	ENSRNOG00000022395	Tnrc6c	100	89.829	Rattus_norvegicus
ENSANAG00000021554	TNRC6C	100	97.987	ENSRBIG00000027777	TNRC6C	100	97.987	Rhinopithecus_bieti
ENSANAG00000021554	TNRC6C	100	98.096	ENSRROG00000042912	TNRC6C	100	98.096	Rhinopithecus_roxellana
ENSANAG00000021554	TNRC6C	100	98.765	ENSSBOG00000023981	TNRC6C	100	98.765	Saimiri_boliviensis_boliviensis
ENSANAG00000021554	TNRC6C	52	85.946	ENSSHAG00000018330	-	100	88.532	Sarcophilus_harrisii
ENSANAG00000021554	TNRC6C	78	65.217	ENSSFOG00015006475	tnrc6c1	89	65.217	Scleropages_formosus
ENSANAG00000021554	TNRC6C	76	56.289	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSANAG00000021554	TNRC6C	100	48.724	ENSSMAG00000012761	tnrc6c1	99	50.489	Scophthalmus_maximus
ENSANAG00000021554	TNRC6C	100	50.542	ENSSDUG00000002366	tnrc6c1	99	49.446	Seriola_dumerili
ENSANAG00000021554	TNRC6C	100	48.726	ENSSLDG00000025613	tnrc6c1	100	50.083	Seriola_lalandi_dorsalis
ENSANAG00000021554	TNRC6C	91	89.224	ENSSARG00000006816	TNRC6C	91	89.076	Sorex_araneus
ENSANAG00000021554	TNRC6C	82	85.034	ENSSPUG00000007341	TNRC6C	99	84.564	Sphenodon_punctatus
ENSANAG00000021554	TNRC6C	78	53.667	ENSSPAG00000014977	tnrc6c1	97	48.756	Stegastes_partitus
ENSANAG00000021554	TNRC6C	100	85.444	ENSSSCG00000034373	TNRC6C	100	87.825	Sus_scrofa
ENSANAG00000021554	TNRC6C	100	87.995	ENSTGUG00000007733	TNRC6C	100	85.570	Taeniopygia_guttata
ENSANAG00000021554	TNRC6C	87	51.611	ENSTRUG00000011685	tnrc6c1	100	49.283	Takifugu_rubripes
ENSANAG00000021554	TNRC6C	88	51.753	ENSTNIG00000005273	tnrc6c1	100	60.097	Tetraodon_nigroviridis
ENSANAG00000021554	TNRC6C	64	90.234	ENSTBEG00000005046	TNRC6C	100	82.498	Tupaia_belangeri
ENSANAG00000021554	TNRC6C	100	90.597	ENSTTRG00000010828	TNRC6C	97	90.302	Tursiops_truncatus
ENSANAG00000021554	TNRC6C	100	88.360	ENSUMAG00000013614	TNRC6C	99	89.364	Ursus_maritimus
ENSANAG00000021554	TNRC6C	52	80.979	ENSVPAG00000006765	-	99	80.985	Vicugna_pacos
ENSANAG00000021554	TNRC6C	100	91.248	ENSVVUG00000015268	TNRC6C	100	91.307	Vulpes_vulpes
ENSANAG00000021554	TNRC6C	100	75.485	ENSXETG00000019470	tnrc6c	100	74.956	Xenopus_tropicalis
ENSANAG00000021554	TNRC6C	100	49.656	ENSXMAG00000025971	tnrc6c1	100	48.895	Xiphophorus_maculatus