EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000021577 (Gene tree)
Gene ID: 105718374
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 45526 bases
Position: chrKZ197284.1:269306-314831
Accession: 105718374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000007166	SF3b1	PF08920.10	5.3e-47	1	1
ENSANAP00000007147	SF3b1	PF08920.10	6.1e-47	1	1
ENSANAP00000007096	SF3b1	PF08920.10	6.1e-47	1	1
ENSANAP00000007121	SF3b1	PF08920.10	6.1e-47	1	1
ENSANAP00000007159	SF3b1	PF08920.10	6.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000024869	SF3B1-201	6427	XM_021667743	ENSANAP00000007096	1304 (aa)	XP_021523418	A0A2K5CEP3
ENSANAT00000024941	SF3B1-206	6447	XM_021667748	ENSANAP00000007166	1158 (aa)	XP_021523423	A0A2K5CEV3
ENSANAT00000024934	SF3B1-205	3909	-	ENSANAP00000007159	1302 (aa)	-	A0A2K5CEW2
ENSANAT00000024921	SF3B1-204	3900	-	ENSANAP00000007147	1299 (aa)	-	A0A2K5CEA2
ENSANAT00000024894	SF3B1-203	6277	XM_021667742	ENSANAP00000007121	1304 (aa)	XP_021523417	A0A2K5CEP3
ENSANAT00000024892	SF3B1-202	435	XM_021667750	ENSANAP00000007119	144 (aa)	XP_021523425	A0A2K5CES0

Gene Model

Click here to download ENSANAG00000021577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000021577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000021577	SF3B1	100	100.000	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSANAG00000021577	SF3B1	100	94.953	ENSAPOG00000011894	sf3b1	100	93.622	Acanthochromis_polyacanthus
ENSANAG00000021577	SF3B1	100	100.000	ENSAMEG00000013809	SF3B1	99	99.923	Ailuropoda_melanoleuca
ENSANAG00000021577	SF3B1	100	94.416	ENSACIG00000020910	sf3b1	97	93.064	Amphilophus_citrinellus
ENSANAG00000021577	SF3B1	100	95.038	ENSAOCG00000004478	sf3b1	100	93.622	Amphiprion_ocellaris
ENSANAG00000021577	SF3B1	100	95.038	ENSAPEG00000012937	sf3b1	100	93.622	Amphiprion_percula
ENSANAG00000021577	SF3B1	100	94.949	ENSATEG00000020435	sf3b1	100	93.693	Anabas_testudineus
ENSANAG00000021577	SF3B1	100	99.741	ENSAPLG00000003993	SF3B1	99	99.382	Anas_platyrhynchos
ENSANAG00000021577	SF3B1	100	99.223	ENSACAG00000009612	SF3B1	100	98.850	Anolis_carolinensis
ENSANAG00000021577	SF3B1	100	94.264	ENSACLG00000023470	sf3b1	100	92.705	Astatotilapia_calliptera
ENSANAG00000021577	SF3B1	100	95.377	ENSAMXG00000002219	sf3b1	100	93.997	Astyanax_mexicanus
ENSANAG00000021577	SF3B1	100	99.923	ENSBTAG00000008915	SF3B1	100	99.923	Bos_taurus
ENSANAG00000021577	SF3B1	99	70.318	WBGene00011605	sftb-1	98	66.516	Caenorhabditis_elegans
ENSANAG00000021577	SF3B1	100	100.000	ENSCJAG00000003902	SF3B1	100	100.000	Callithrix_jacchus
ENSANAG00000021577	SF3B1	100	100.000	ENSCAFG00000010826	SF3B1	100	100.000	Canis_familiaris
ENSANAG00000021577	SF3B1	100	100.000	ENSCAFG00020004750	SF3B1	100	100.000	Canis_lupus_dingo
ENSANAG00000021577	SF3B1	100	99.923	ENSCHIG00000015226	SF3B1	100	99.923	Capra_hircus
ENSANAG00000021577	SF3B1	100	99.923	ENSTSYG00000009214	SF3B1	100	99.923	Carlito_syrichta
ENSANAG00000021577	SF3B1	100	100.000	ENSCAPG00000006547	SF3B1	99	99.923	Cavia_aperea
ENSANAG00000021577	SF3B1	100	100.000	ENSCPOG00000009353	SF3B1	100	100.000	Cavia_porcellus
ENSANAG00000021577	SF3B1	100	100.000	ENSCCAG00000020506	SF3B1	100	100.000	Cebus_capucinus
ENSANAG00000021577	SF3B1	100	100.000	ENSCATG00000035735	SF3B1	100	100.000	Cercocebus_atys
ENSANAG00000021577	SF3B1	100	100.000	ENSCLAG00000014767	SF3B1	99	100.000	Chinchilla_lanigera
ENSANAG00000021577	SF3B1	100	100.000	ENSCSAG00000011505	SF3B1	100	100.000	Chlorocebus_sabaeus
ENSANAG00000021577	SF3B1	80	96.154	ENSCHOG00000009860	SF3B1	76	98.438	Choloepus_hoffmanni
ENSANAG00000021577	SF3B1	100	99.396	ENSCPBG00000021902	SF3B1	100	99.233	Chrysemys_picta_bellii
ENSANAG00000021577	SF3B1	69	80.586	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSANAG00000021577	SF3B1	99	83.348	ENSCSAVG00000002559	-	99	79.771	Ciona_savignyi
ENSANAG00000021577	SF3B1	100	100.000	ENSCANG00000029415	SF3B1	100	100.000	Colobus_angolensis_palliatus
ENSANAG00000021577	SF3B1	100	100.000	ENSCGRG00001016990	Sf3b1	100	100.000	Cricetulus_griseus_chok1gshd
ENSANAG00000021577	SF3B1	100	100.000	ENSCGRG00000005301	Sf3b1	100	100.000	Cricetulus_griseus_crigri
ENSANAG00000021577	SF3B1	100	91.495	ENSCSEG00000003860	sf3b1	100	89.939	Cynoglossus_semilaevis
ENSANAG00000021577	SF3B1	96	95.251	ENSCVAG00000003680	sf3b1	99	93.676	Cyprinodon_variegatus
ENSANAG00000021577	SF3B1	100	94.949	ENSDARG00000056138	sf3b1	100	93.394	Danio_rerio
ENSANAG00000021577	SF3B1	100	100.000	ENSDNOG00000011754	SF3B1	100	99.923	Dasypus_novemcinctus
ENSANAG00000021577	SF3B1	100	100.000	ENSDORG00000002399	Sf3b1	100	97.297	Dipodomys_ordii
ENSANAG00000021577	SF3B1	100	80.000	FBgn0031266	Sf3b1	100	76.618	Drosophila_melanogaster
ENSANAG00000021577	SF3B1	83	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSANAG00000021577	SF3B1	100	89.338	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSANAG00000021577	SF3B1	100	99.923	ENSEASG00005020159	SF3B1	98	99.923	Equus_asinus_asinus
ENSANAG00000021577	SF3B1	100	99.923	ENSECAG00000021657	SF3B1	98	99.923	Equus_caballus
ENSANAG00000021577	SF3B1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSANAG00000021577	SF3B1	100	94.048	ENSELUG00000005977	sf3b1	98	92.981	Esox_lucius
ENSANAG00000021577	SF3B1	100	100.000	ENSFCAG00000005038	SF3B1	100	100.000	Felis_catus
ENSANAG00000021577	SF3B1	100	99.827	ENSFALG00000004281	SF3B1	99	99.459	Ficedula_albicollis
ENSANAG00000021577	SF3B1	100	100.000	ENSFDAG00000017510	SF3B1	100	100.000	Fukomys_damarensis
ENSANAG00000021577	SF3B1	100	94.949	ENSFHEG00000014333	sf3b1	100	92.938	Fundulus_heteroclitus
ENSANAG00000021577	SF3B1	100	94.597	ENSGMOG00000006773	sf3b1	100	93.531	Gadus_morhua
ENSANAG00000021577	SF3B1	100	99.741	ENSGALG00000008038	SF3B1	100	99.387	Gallus_gallus
ENSANAG00000021577	SF3B1	100	94.692	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSANAG00000021577	SF3B1	100	94.931	ENSGACG00000008839	sf3b1	100	93.674	Gasterosteus_aculeatus
ENSANAG00000021577	SF3B1	100	99.396	ENSGAGG00000017478	SF3B1	100	98.553	Gopherus_agassizii
ENSANAG00000021577	SF3B1	100	92.884	ENSGGOG00000009264	SF3B1	100	93.942	Gorilla_gorilla
ENSANAG00000021577	SF3B1	99	94.340	ENSHBUG00000007705	sf3b1	99	92.770	Haplochromis_burtoni
ENSANAG00000021577	SF3B1	100	100.000	ENSHGLG00000008285	-	99	100.000	Heterocephalus_glaber_female
ENSANAG00000021577	SF3B1	100	97.755	ENSHGLG00100005535	-	99	97.992	Heterocephalus_glaber_male
ENSANAG00000021577	SF3B1	100	94.553	ENSHCOG00000016775	sf3b1	100	92.825	Hippocampus_comes
ENSANAG00000021577	SF3B1	100	95.291	ENSIPUG00000013171	sf3b1	100	93.997	Ictalurus_punctatus
ENSANAG00000021577	SF3B1	100	100.000	ENSSTOG00000011034	SF3B1	100	100.000	Ictidomys_tridecemlineatus
ENSANAG00000021577	SF3B1	100	99.914	ENSJJAG00000010903	Sf3b1	99	99.922	Jaculus_jaculus
ENSANAG00000021577	SF3B1	100	94.369	ENSKMAG00000004009	sf3b1	100	93.030	Kryptolebias_marmoratus
ENSANAG00000021577	SF3B1	100	95.095	ENSLBEG00000022208	sf3b1	100	93.435	Labrus_bergylta
ENSANAG00000021577	SF3B1	100	93.499	ENSLACG00000014832	SF3B1	99	92.490	Latimeria_chalumnae
ENSANAG00000021577	SF3B1	100	96.147	ENSLOCG00000003899	sf3b1	100	94.765	Lepisosteus_oculatus
ENSANAG00000021577	SF3B1	100	100.000	ENSLAFG00000001956	SF3B1	100	100.000	Loxodonta_africana
ENSANAG00000021577	SF3B1	100	100.000	ENSMMUG00000022430	SF3B1	99	100.000	Macaca_mulatta
ENSANAG00000021577	SF3B1	100	100.000	ENSMNEG00000042333	SF3B1	100	100.000	Macaca_nemestrina
ENSANAG00000021577	SF3B1	100	93.023	ENSMLEG00000026141	SF3B1	99	94.027	Mandrillus_leucophaeus
ENSANAG00000021577	SF3B1	100	94.863	ENSMAMG00000010241	sf3b1	100	93.617	Mastacembelus_armatus
ENSANAG00000021577	SF3B1	100	94.264	ENSMZEG00005021254	sf3b1	100	92.705	Maylandia_zebra
ENSANAG00000021577	SF3B1	100	99.741	ENSMGAG00000007017	SF3B1	99	98.764	Meleagris_gallopavo
ENSANAG00000021577	SF3B1	100	95.250	ENSMAUG00000009071	Sf3b1	99	95.753	Mesocricetus_auratus
ENSANAG00000021577	SF3B1	100	99.923	ENSMICG00000013879	SF3B1	100	99.923	Microcebus_murinus
ENSANAG00000021577	SF3B1	100	95.078	ENSMOCG00000000455	Sf3b1	100	95.311	Microtus_ochrogaster
ENSANAG00000021577	SF3B1	84	93.059	ENSMMOG00000000475	sf3b1	100	93.059	Mola_mola
ENSANAG00000021577	SF3B1	100	99.655	ENSMODG00000012275	SF3B1	100	99.310	Monodelphis_domestica
ENSANAG00000021577	SF3B1	100	94.777	ENSMALG00000017211	sf3b1	100	93.541	Monopterus_albus
ENSANAG00000021577	SF3B1	100	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	100	100.000	Mus_caroli
ENSANAG00000021577	SF3B1	100	100.000	ENSMUSG00000025982	Sf3b1	100	100.000	Mus_musculus
ENSANAG00000021577	SF3B1	100	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	100	100.000	Mus_spretus
ENSANAG00000021577	SF3B1	100	100.000	ENSMPUG00000007799	SF3B1	100	100.000	Mustela_putorius_furo
ENSANAG00000021577	SF3B1	100	98.773	ENSMLUG00000000840	SF3B1	100	98.773	Myotis_lucifugus
ENSANAG00000021577	SF3B1	100	100.000	ENSNGAG00000021884	-	100	99.769	Nannospalax_galili
ENSANAG00000021577	SF3B1	100	94.502	ENSNBRG00000015816	sf3b1	100	89.109	Neolamprologus_brichardi
ENSANAG00000021577	SF3B1	100	100.000	ENSNLEG00000006861	SF3B1	100	100.000	Nomascus_leucogenys
ENSANAG00000021577	SF3B1	71	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSANAG00000021577	SF3B1	100	89.637	ENSOPRG00000008596	SF3B1	100	88.113	Ochotona_princeps
ENSANAG00000021577	SF3B1	100	100.000	ENSODEG00000011153	-	100	100.000	Octodon_degus
ENSANAG00000021577	SF3B1	100	94.264	ENSONIG00000013758	sf3b1	100	92.705	Oreochromis_niloticus
ENSANAG00000021577	SF3B1	94	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSANAG00000021577	SF3B1	100	94.777	ENSORLG00000020219	sf3b1	100	93.389	Oryzias_latipes
ENSANAG00000021577	SF3B1	100	94.777	ENSORLG00020001746	sf3b1	100	93.389	Oryzias_latipes_hni
ENSANAG00000021577	SF3B1	64	90.952	ENSORLG00015001759	sf3b1	98	90.952	Oryzias_latipes_hsok
ENSANAG00000021577	SF3B1	100	94.777	ENSOMEG00000019231	sf3b1	100	93.394	Oryzias_melastigma
ENSANAG00000021577	SF3B1	100	99.923	ENSOARG00000015374	SF3B1	100	99.923	Ovis_aries
ENSANAG00000021577	SF3B1	100	100.000	ENSPPAG00000035007	SF3B1	100	100.000	Pan_paniscus
ENSANAG00000021577	SF3B1	100	100.000	ENSPPRG00000009090	SF3B1	100	100.000	Panthera_pardus
ENSANAG00000021577	SF3B1	100	100.000	ENSPTIG00000021557	SF3B1	100	100.000	Panthera_tigris_altaica
ENSANAG00000021577	SF3B1	99	91.455	ENSPTRG00000012771	SF3B1	99	91.455	Pan_troglodytes
ENSANAG00000021577	SF3B1	100	100.000	ENSPANG00000013417	SF3B1	100	100.000	Papio_anubis
ENSANAG00000021577	SF3B1	100	96.055	ENSPKIG00000000784	sf3b1	100	94.901	Paramormyrops_kingsleyae
ENSANAG00000021577	SF3B1	100	98.014	ENSPSIG00000017222	SF3B1	99	97.692	Pelodiscus_sinensis
ENSANAG00000021577	SF3B1	89	95.761	ENSPMGG00000004330	sf3b1	99	93.850	Periophthalmus_magnuspinnatus
ENSANAG00000021577	SF3B1	100	100.000	ENSPEMG00000010699	Sf3b1	100	100.000	Peromyscus_maniculatus_bairdii
ENSANAG00000021577	SF3B1	99	92.612	ENSPMAG00000001311	sf3b1	100	90.205	Petromyzon_marinus
ENSANAG00000021577	SF3B1	100	99.655	ENSPCIG00000010642	SF3B1	100	99.233	Phascolarctos_cinereus
ENSANAG00000021577	SF3B1	100	94.692	ENSPFOG00000000073	sf3b1	100	93.323	Poecilia_formosa
ENSANAG00000021577	SF3B1	100	94.692	ENSPLAG00000002293	sf3b1	100	93.394	Poecilia_latipinna
ENSANAG00000021577	SF3B1	100	94.692	ENSPMEG00000000446	sf3b1	98	93.394	Poecilia_mexicana
ENSANAG00000021577	SF3B1	100	94.777	ENSPREG00000019652	sf3b1	100	93.470	Poecilia_reticulata
ENSANAG00000021577	SF3B1	100	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSANAG00000021577	SF3B1	100	99.847	ENSPCAG00000009292	SF3B1	100	99.847	Procavia_capensis
ENSANAG00000021577	SF3B1	100	99.923	ENSPCOG00000024074	SF3B1	100	99.923	Propithecus_coquereli
ENSANAG00000021577	SF3B1	100	100.000	ENSPVAG00000008302	SF3B1	100	100.000	Pteropus_vampyrus
ENSANAG00000021577	SF3B1	100	94.264	ENSPNYG00000014939	sf3b1	100	92.629	Pundamilia_nyererei
ENSANAG00000021577	SF3B1	100	95.291	ENSPNAG00000008288	sf3b1	100	93.997	Pygocentrus_nattereri
ENSANAG00000021577	SF3B1	100	100.000	ENSRNOG00000013516	Sf3b1	100	100.000	Rattus_norvegicus
ENSANAG00000021577	SF3B1	100	96.028	ENSRBIG00000026096	SF3B1	100	96.237	Rhinopithecus_bieti
ENSANAG00000021577	SF3B1	100	100.000	ENSRROG00000031308	SF3B1	100	100.000	Rhinopithecus_roxellana
ENSANAG00000021577	SF3B1	100	100.000	ENSSBOG00000020080	SF3B1	100	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000021577	SF3B1	100	99.655	ENSSHAG00000017564	SF3B1	100	99.310	Sarcophilus_harrisii
ENSANAG00000021577	SF3B1	100	95.637	ENSSFOG00015021535	sf3b1	100	94.761	Scleropages_formosus
ENSANAG00000021577	SF3B1	99	94.364	ENSSMAG00000013977	sf3b1	99	92.803	Scophthalmus_maximus
ENSANAG00000021577	SF3B1	100	94.863	ENSSDUG00000017422	sf3b1	100	93.389	Seriola_dumerili
ENSANAG00000021577	SF3B1	100	94.777	ENSSLDG00000019495	sf3b1	100	93.313	Seriola_lalandi_dorsalis
ENSANAG00000021577	SF3B1	79	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSANAG00000021577	SF3B1	100	99.223	ENSSPUG00000000410	SF3B1	100	99.080	Sphenodon_punctatus
ENSANAG00000021577	SF3B1	100	95.034	ENSSPAG00000010451	sf3b1	99	93.693	Stegastes_partitus
ENSANAG00000021577	SF3B1	100	100.000	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSANAG00000021577	SF3B1	100	99.655	ENSTGUG00000010553	SF3B1	100	99.310	Taeniopygia_guttata
ENSANAG00000021577	SF3B1	100	94.521	ENSTRUG00000015534	sf3b1	100	93.237	Takifugu_rubripes
ENSANAG00000021577	SF3B1	88	100.000	ENSTBEG00000008714	SF3B1	93	100.000	Tupaia_belangeri
ENSANAG00000021577	SF3B1	91	100.000	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSANAG00000021577	SF3B1	94	95.847	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSANAG00000021577	SF3B1	100	100.000	ENSUMAG00000020945	SF3B1	100	100.000	Ursus_maritimus
ENSANAG00000021577	SF3B1	100	91.871	ENSVPAG00000005798	SF3B1	100	91.871	Vicugna_pacos
ENSANAG00000021577	SF3B1	100	100.000	ENSVVUG00000025948	SF3B1	95	100.000	Vulpes_vulpes
ENSANAG00000021577	SF3B1	100	97.755	ENSXETG00000013339	sf3b1	100	96.628	Xenopus_tropicalis
ENSANAG00000021577	SF3B1	100	90.768	ENSXCOG00000018086	sf3b1	100	89.794	Xiphophorus_couchianus
ENSANAG00000021577	SF3B1	100	94.692	ENSXMAG00000007369	sf3b1	100	93.692	Xiphophorus_maculatus