EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSANAG00000021713 (Gene tree)
Gene ID
105707565
Gene Symbol
UPF3A
Alias
HUPF3A|RENT3A|UPF3
Full Name
UPF3A%2C regulator of nonsense mediated mRNA decay
Gene Type
protein_coding
Species
Aotus_nancymaae
Status
putative
Strand
Minus strand
Length
19155 bases
Position
chrKZ206642.1:109755-128909
Accession
105707565
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSANAP00000007300Smg4_UPF3PF03467.151.1e-5111
ENSANAP00000007306Smg4_UPF3PF03467.151.7e-2912
ENSANAP00000007306Smg4_UPF3PF03467.151.7e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSANAT00000025076UPF3A-2011431XM_021667873ENSANAP00000007300476 (aa)XP_021523548A0A2K5CF28
ENSANAT00000025082UPF3A-2021332-ENSANAP00000007306443 (aa)-A0A2K5CF91
Gene Model
Click here to download ENSANAG00000021713's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000021713's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSANAG00000021713UPF3A8244.802ENSANAG00000025598-7072.464
ENSANAG00000021713UPF3A8245.833ENSANAG00000021894-7769.697
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSANAG00000021713UPF3A10088.866ENSG00000169062UPF3A9990.385Homo_sapiens
ENSANAG00000021713UPF3A9952.929ENSAPOG00000013484upf3a9353.205Acanthochromis_polyacanthus
ENSANAG00000021713UPF3A9371.930ENSAMEG00000004259UPF3A9971.930Ailuropoda_melanoleuca
ENSANAG00000021713UPF3A8643.852ENSAMEG00000000163UPF3B8445.185Ailuropoda_melanoleuca
ENSANAG00000021713UPF3A9951.000ENSACIG00000020468upf3a7081.905Amphilophus_citrinellus
ENSANAG00000021713UPF3A9952.830ENSAOCG00000020784upf3a9452.411Amphiprion_ocellaris
ENSANAG00000021713UPF3A5357.088ENSAOCG00000000706upf3b9344.111Amphiprion_ocellaris
ENSANAG00000021713UPF3A9952.830ENSAPEG00000003519upf3a9452.411Amphiprion_percula
ENSANAG00000021713UPF3A9953.390ENSATEG00000005843upf3a9453.445Anabas_testudineus
ENSANAG00000021713UPF3A8266.158ENSACAG00000001540UPF3A9466.158Anolis_carolinensis
ENSANAG00000021713UPF3A8244.226ENSACAG00000003625UPF3B8543.951Anolis_carolinensis
ENSANAG00000021713UPF3A9951.411ENSACLG00000026274upf3a9350.813Astatotilapia_calliptera
ENSANAG00000021713UPF3A9353.648ENSAMXG00000002608upf3a9952.092Astyanax_mexicanus
ENSANAG00000021713UPF3A10091.387ENSCJAG00000019102UPF3A10091.387Callithrix_jacchus
ENSANAG00000021713UPF3A8244.307ENSCJAG00000004975UPF3B7769.091Callithrix_jacchus
ENSANAG00000021713UPF3A8246.040ENSCAFG00000018426UPF3B8645.679Canis_familiaris
ENSANAG00000021713UPF3A9672.807ENSCAFG00000006504UPF3A9872.807Canis_familiaris
ENSANAG00000021713UPF3A9673.026ENSCAFG00020014268UPF3A9573.026Canis_lupus_dingo
ENSANAG00000021713UPF3A8245.750ENSCAFG00020004074UPF3B6776.712Canis_lupus_dingo
ENSANAG00000021713UPF3A8439.401ENSCHIG00000011454-8437.500Capra_hircus
ENSANAG00000021713UPF3A9673.420ENSCHIG00000008682UPF3A9173.420Capra_hircus
ENSANAG00000021713UPF3A7764.894ENSTSYG00000001918UPF3A10065.252Carlito_syrichta
ENSANAG00000021713UPF3A8244.938ENSTSYG00000014690UPF3B7664.706Carlito_syrichta
ENSANAG00000021713UPF3A8267.179ENSCPOG00000006824UPF3A9067.179Cavia_porcellus
ENSANAG00000021713UPF3A10093.067ENSCCAG00000018406UPF3A10093.067Cebus_capucinus
ENSANAG00000021713UPF3A8137.845ENSCCAG00000029813-5258.861Cebus_capucinus
ENSANAG00000021713UPF3A10088.025ENSCATG00000029733UPF3A10088.025Cercocebus_atys
ENSANAG00000021713UPF3A8744.573ENSCLAG00000003260UPF3B8545.455Chinchilla_lanigera
ENSANAG00000021713UPF3A10086.848ENSCSAG00000017388UPF3A10086.848Chlorocebus_sabaeus
ENSANAG00000021713UPF3A7481.690ENSCHOG00000006918-6077.027Choloepus_hoffmanni
ENSANAG00000021713UPF3A5056.612ENSCPBG00000020685UPF3B8644.938Chrysemys_picta_bellii
ENSANAG00000021713UPF3A5452.747ENSCGRG00001006858-8544.039Cricetulus_griseus_chok1gshd
ENSANAG00000021713UPF3A9166.820ENSCGRG00001017387Upf3a9966.359Cricetulus_griseus_chok1gshd
ENSANAG00000021713UPF3A9066.667ENSCGRG00000001468Upf3a9966.200Cricetulus_griseus_crigri
ENSANAG00000021713UPF3A9752.411ENSCSEG00000005106upf3a9351.992Cynoglossus_semilaevis
ENSANAG00000021713UPF3A8146.283ENSCSEG00000002046upf3b8743.765Cynoglossus_semilaevis
ENSANAG00000021713UPF3A8855.504ENSCVAG00000022333upf3a8655.504Cyprinodon_variegatus
ENSANAG00000021713UPF3A8753.211ENSDARG00000069297upf3a9253.211Danio_rerio
ENSANAG00000021713UPF3A5354.647ENSDARG00000000489upf3b9142.729Danio_rerio
ENSANAG00000021713UPF3A8971.264ENSDNOG00000034391UPF3A9871.494Dasypus_novemcinctus
ENSANAG00000021713UPF3A8244.140ENSDORG00000006077Upf3b8443.812Dipodomys_ordii
ENSANAG00000021713UPF3A9963.445ENSETEG00000010110UPF3A9963.866Echinops_telfairi
ENSANAG00000021713UPF3A10070.928ENSEASG00005021884UPF3A10070.928Equus_asinus_asinus
ENSANAG00000021713UPF3A8246.076ENSEASG00005012919UPF3B7073.913Equus_asinus_asinus
ENSANAG00000021713UPF3A8246.076ENSECAG00000016947UPF3B7065.714Equus_caballus
ENSANAG00000021713UPF3A10070.309ENSECAG00000017141UPF3A10070.309Equus_caballus
ENSANAG00000021713UPF3A9952.227ENSELUG00000011050upf3a9951.215Esox_lucius
ENSANAG00000021713UPF3A9675.000ENSFCAG00000014602UPF3A9675.000Felis_catus
ENSANAG00000021713UPF3A8642.488ENSFDAG00000018869UPF3B8443.842Fukomys_damarensis
ENSANAG00000021713UPF3A5060.241ENSGMOG00000001621upf3b8841.568Gadus_morhua
ENSANAG00000021713UPF3A7057.310ENSGMOG00000019615upf3a10058.187Gadus_morhua
ENSANAG00000021713UPF3A9754.468ENSGAFG00000021170upf3a9254.468Gambusia_affinis
ENSANAG00000021713UPF3A8044.472ENSGACG00000017435upf3b8844.310Gasterosteus_aculeatus
ENSANAG00000021713UPF3A7056.716ENSGACG00000001972upf3a10056.418Gasterosteus_aculeatus
ENSANAG00000021713UPF3A8839.910ENSGAGG00000001219UPF3B8744.118Gopherus_agassizii
ENSANAG00000021713UPF3A9974.260ENSGGOG00000043074-8685.106Gorilla_gorilla
ENSANAG00000021713UPF3A10089.076ENSGGOG00000015428UPF3A10089.076Gorilla_gorilla
ENSANAG00000021713UPF3A9180.494ENSGGOG00000041219-9185.067Gorilla_gorilla
ENSANAG00000021713UPF3A9952.917ENSHBUG00000011325upf3a9252.991Haplochromis_burtoni
ENSANAG00000021713UPF3A5152.209ENSHGLG00000011189-8243.103Heterocephalus_glaber_female
ENSANAG00000021713UPF3A8268.798ENSHGLG00000001544UPF3A9068.286Heterocephalus_glaber_female
ENSANAG00000021713UPF3A8642.723ENSHGLG00000019582-8443.596Heterocephalus_glaber_female
ENSANAG00000021713UPF3A8642.689ENSHGLG00100002042-8443.921Heterocephalus_glaber_male
ENSANAG00000021713UPF3A8268.798ENSHGLG00100013244UPF3A9068.286Heterocephalus_glaber_male
ENSANAG00000021713UPF3A5152.209ENSHGLG00100001889-8241.691Heterocephalus_glaber_male
ENSANAG00000021713UPF3A8746.101ENSHCOG00000017004upf3b8842.222Hippocampus_comes
ENSANAG00000021713UPF3A9652.079ENSIPUG00000023450upf3a9352.288Ictalurus_punctatus
ENSANAG00000021713UPF3A8643.427ENSSTOG00000001101UPF3B8445.320Ictidomys_tridecemlineatus
ENSANAG00000021713UPF3A9853.191ENSKMAG00000004381upf3a9253.564Kryptolebias_marmoratus
ENSANAG00000021713UPF3A5056.400ENSLBEG00000028689upf3b5452.846Labrus_bergylta
ENSANAG00000021713UPF3A8343.571ENSLACG00000008691UPF3B8949.884Latimeria_chalumnae
ENSANAG00000021713UPF3A6445.847ENSLACG00000006645UPF3A6977.358Latimeria_chalumnae
ENSANAG00000021713UPF3A9955.324ENSLOCG00000002665upf3a9855.324Lepisosteus_oculatus
ENSANAG00000021713UPF3A5061.538ENSLOCG00000015238upf3b8946.798Lepisosteus_oculatus
ENSANAG00000021713UPF3A8542.439ENSLAFG00000001267UPF3B8443.980Loxodonta_africana
ENSANAG00000021713UPF3A8559.404ENSLAFG00000023358UPF3A9959.080Loxodonta_africana
ENSANAG00000021713UPF3A10083.891ENSMFAG00000045016UPF3A10083.857Macaca_fascicularis
ENSANAG00000021713UPF3A10083.403ENSMMUG00000007449UPF3A10082.773Macaca_mulatta
ENSANAG00000021713UPF3A9979.466ENSMNEG00000036402UPF3A10079.671Macaca_nemestrina
ENSANAG00000021713UPF3A8687.500ENSMLEG00000014726UPF3A10086.631Mandrillus_leucophaeus
ENSANAG00000021713UPF3A9952.049ENSMAMG00000018364upf3a9551.844Mastacembelus_armatus
ENSANAG00000021713UPF3A9951.411ENSMZEG00005021571upf3a9350.813Maylandia_zebra
ENSANAG00000021713UPF3A8262.594ENSMGAG00000014837UPF3A9963.092Meleagris_gallopavo
ENSANAG00000021713UPF3A8847.098ENSMAUG00000008705Upf3b8451.338Mesocricetus_auratus
ENSANAG00000021713UPF3A7074.030ENSMOCG00000000550Upf3a9173.433Microtus_ochrogaster
ENSANAG00000021713UPF3A9750.304ENSMMOG00000019751upf3a9350.101Mola_mola
ENSANAG00000021713UPF3A8666.901ENSMODG00000003159UPF3A9966.901Monodelphis_domestica
ENSANAG00000021713UPF3A8648.492ENSMODG00000010232UPF3B9848.492Monodelphis_domestica
ENSANAG00000021713UPF3A8765.783MGP_CAROLIEiJ_G0030848Upf3a9965.899Mus_caroli
ENSANAG00000021713UPF3A8641.705MGP_CAROLIEiJ_G0032999Upf3b8443.735Mus_caroli
ENSANAG00000021713UPF3A8766.506ENSMUSG00000038398Upf3a9966.359Mus_musculus
ENSANAG00000021713UPF3A8766.506MGP_PahariEiJ_G0021311Upf3a9966.820Mus_pahari
ENSANAG00000021713UPF3A8642.032MGP_PahariEiJ_G0031543Upf3b8443.243Mus_pahari
ENSANAG00000021713UPF3A8766.024MGP_SPRETEiJ_G0031958Upf3a9965.899Mus_spretus
ENSANAG00000021713UPF3A9674.561ENSMPUG00000009139UPF3A9474.561Mustela_putorius_furo
ENSANAG00000021713UPF3A8244.802ENSMPUG00000001531UPF3B8645.185Mustela_putorius_furo
ENSANAG00000021713UPF3A8670.546ENSMLUG00000015905UPF3A10070.546Myotis_lucifugus
ENSANAG00000021713UPF3A8244.554ENSMLUG00000010821UPF3B8443.951Myotis_lucifugus
ENSANAG00000021713UPF3A9168.664ENSNGAG00000019314Upf3a9968.203Nannospalax_galili
ENSANAG00000021713UPF3A9952.500ENSNBRG00000000828upf3a9252.778Neolamprologus_brichardi
ENSANAG00000021713UPF3A10088.470ENSNLEG00000007563UPF3A10088.470Nomascus_leucogenys
ENSANAG00000021713UPF3A6567.886ENSOPRG00000008846-5669.512Ochotona_princeps
ENSANAG00000021713UPF3A8743.155ENSODEG00000002186-8443.951Octodon_degus
ENSANAG00000021713UPF3A9952.083ENSONIG00000006817upf3a9451.875Oreochromis_niloticus
ENSANAG00000021713UPF3A7766.087ENSOANG00000006985-9766.667Ornithorhynchus_anatinus
ENSANAG00000021713UPF3A9858.848ENSOCUG00000008450UPF3A9958.848Oryctolagus_cuniculus
ENSANAG00000021713UPF3A5051.852ENSORLG00000001026upf3b9040.376Oryzias_latipes
ENSANAG00000021713UPF3A9851.875ENSORLG00000010911upf3a9252.229Oryzias_latipes
ENSANAG00000021713UPF3A5052.263ENSORLG00020003758upf3b9040.376Oryzias_latipes_hni
ENSANAG00000021713UPF3A9054.338ENSORLG00020014317upf3a8853.881Oryzias_latipes_hni
ENSANAG00000021713UPF3A5052.263ENSORLG00015012954upf3b9040.845Oryzias_latipes_hsok
ENSANAG00000021713UPF3A9852.101ENSORLG00015017339upf3a5551.566Oryzias_latipes_hsok
ENSANAG00000021713UPF3A9652.155ENSOMEG00000014425upf3a9151.940Oryzias_melastigma
ENSANAG00000021713UPF3A5254.962ENSOGAG00000004643-8445.343Otolemur_garnettii
ENSANAG00000021713UPF3A8275.385ENSOGAG00000004788UPF3A9674.811Otolemur_garnettii
ENSANAG00000021713UPF3A8742.466ENSOGAG00000033003-8744.878Otolemur_garnettii
ENSANAG00000021713UPF3A8242.386ENSOARG00000007869-9240.102Ovis_aries
ENSANAG00000021713UPF3A9472.185ENSOARG00000009004UPF3A9672.185Ovis_aries
ENSANAG00000021713UPF3A10087.815ENSPPAG00000042267UPF3A10087.815Pan_paniscus
ENSANAG00000021713UPF3A9675.000ENSPPRG00000025062UPF3A9675.000Panthera_pardus
ENSANAG00000021713UPF3A8244.802ENSPPRG00000023536UPF3B8444.691Panthera_pardus
ENSANAG00000021713UPF3A9179.259ENSPTRG00000051640-9481.606Pan_troglodytes
ENSANAG00000021713UPF3A9079.500ENSPTRG00000041187-9183.467Pan_troglodytes
ENSANAG00000021713UPF3A10088.025ENSPTRG00000006073UPF3A10088.025Pan_troglodytes
ENSANAG00000021713UPF3A9575.472ENSPTRG00000041835-9082.133Pan_troglodytes
ENSANAG00000021713UPF3A10086.765ENSPANG00000004346UPF3A10086.765Papio_anubis
ENSANAG00000021713UPF3A8752.822ENSPKIG00000004422upf3a9553.132Paramormyrops_kingsleyae
ENSANAG00000021713UPF3A8345.909ENSPKIG00000019226upf3b7571.795Paramormyrops_kingsleyae
ENSANAG00000021713UPF3A8667.073ENSPSIG00000007468UPF3A10066.910Pelodiscus_sinensis
ENSANAG00000021713UPF3A9949.304ENSPMGG00000012696upf3a9548.521Periophthalmus_magnuspinnatus
ENSANAG00000021713UPF3A9169.124ENSPEMG00000019968-9968.664Peromyscus_maniculatus_bairdii
ENSANAG00000021713UPF3A8843.080ENSPEMG00000012352Upf3b8445.255Peromyscus_maniculatus_bairdii
ENSANAG00000021713UPF3A7578.414ENSPCIG00000019590-9472.619Phascolarctos_cinereus
ENSANAG00000021713UPF3A8943.468ENSPCIG00000028914UPF3B8944.706Phascolarctos_cinereus
ENSANAG00000021713UPF3A9754.158ENSPFOG00000013222upf3a9254.158Poecilia_formosa
ENSANAG00000021713UPF3A9753.191ENSPLAG00000011960upf3a9453.191Poecilia_latipinna
ENSANAG00000021713UPF3A9751.943ENSPMEG00000000836upf3a9351.943Poecilia_mexicana
ENSANAG00000021713UPF3A10088.866ENSPPYG00000005536UPF3A10088.866Pongo_abelii
ENSANAG00000021713UPF3A7067.552ENSPCAG00000013124UPF3A7067.847Procavia_capensis
ENSANAG00000021713UPF3A8249.029ENSPCOG00000021960UPF3B8445.588Propithecus_coquereli
ENSANAG00000021713UPF3A10067.573ENSPVAG00000005656UPF3A10067.573Pteropus_vampyrus
ENSANAG00000021713UPF3A9951.411ENSPNYG00000011289upf3a9350.813Pundamilia_nyererei
ENSANAG00000021713UPF3A8953.917ENSPNAG00000019532upf3a8953.917Pygocentrus_nattereri
ENSANAG00000021713UPF3A8543.056ENSPNAG00000021528upf3b9242.141Pygocentrus_nattereri
ENSANAG00000021713UPF3A8667.892ENSRNOG00000017397Upf3a9767.647Rattus_norvegicus
ENSANAG00000021713UPF3A8885.919ENSRBIG00000034007UPF3A9385.919Rhinopithecus_bieti
ENSANAG00000021713UPF3A8686.978ENSRROG00000012212UPF3A8586.978Rhinopithecus_roxellana
ENSANAG00000021713UPF3A8245.833ENSSBOG00000019740UPF3B7870.552Saimiri_boliviensis_boliviensis
ENSANAG00000021713UPF3A10085.084ENSSBOG00000029989UPF3A10085.084Saimiri_boliviensis_boliviensis
ENSANAG00000021713UPF3A8866.983ENSSHAG00000009895UPF3A10066.983Sarcophilus_harrisii
ENSANAG00000021713UPF3A8546.445ENSSHAG00000008634UPF3B8744.787Sarcophilus_harrisii
ENSANAG00000021713UPF3A5258.431ENSSFOG00015005614upf3b9243.023Scleropages_formosus
ENSANAG00000021713UPF3A8755.476ENSSFOG00015021851upf3a8855.476Scleropages_formosus
ENSANAG00000021713UPF3A5061.925ENSSMAG00000012913upf3b9043.160Scophthalmus_maximus
ENSANAG00000021713UPF3A9951.815ENSSDUG00000009680upf3a9451.613Seriola_dumerili
ENSANAG00000021713UPF3A9953.542ENSSLDG00000009700upf3a9453.125Seriola_lalandi_dorsalis
ENSANAG00000021713UPF3A7594.286ENSSARG00000007262UPF3A9755.611Sorex_araneus
ENSANAG00000021713UPF3A8344.552ENSSPUG00000013082UPF3B8444.802Sphenodon_punctatus
ENSANAG00000021713UPF3A5160.317ENSSPAG00000009989upf3b9342.956Stegastes_partitus
ENSANAG00000021713UPF3A10070.515ENSSSCG00000024679UPF3A9770.515Sus_scrofa
ENSANAG00000021713UPF3A8244.554ENSSSCG00000012617UPF3B8444.198Sus_scrofa
ENSANAG00000021713UPF3A8369.289ENSTGUG00000009493UPF3A9969.211Taeniopygia_guttata
ENSANAG00000021713UPF3A9253.020ENSTRUG00000012730upf3a9153.020Takifugu_rubripes
ENSANAG00000021713UPF3A8349.398ENSTNIG00000014973upf3a9948.058Tetraodon_nigroviridis
ENSANAG00000021713UPF3A6959.271ENSTBEG00000017186-10059.271Tupaia_belangeri
ENSANAG00000021713UPF3A10063.598ENSTTRG00000015414UPF3A10063.598Tursiops_truncatus
ENSANAG00000021713UPF3A8245.432ENSUAMG00000024565UPF3B7072.464Ursus_americanus
ENSANAG00000021713UPF3A8242.386ENSUMAG00000002150UPF3B8444.110Ursus_maritimus
ENSANAG00000021713UPF3A8670.905ENSVPAG00000003525UPF3A10070.905Vicugna_pacos
ENSANAG00000021713UPF3A9670.175ENSVVUG00000013538UPF3A9270.175Vulpes_vulpes
ENSANAG00000021713UPF3A8245.750ENSVVUG00000011594UPF3B7769.697Vulpes_vulpes
ENSANAG00000021713UPF3A8243.902ENSXETG00000007440upf3b7170.122Xenopus_tropicalis
ENSANAG00000021713UPF3A8257.653ENSXETG00000002572upf3a9157.908Xenopus_tropicalis
ENSANAG00000021713UPF3A9637.259ENSXCOG00000018591upf3a9243.789Xiphophorus_couchianus
ENSANAG00000021713UPF3A9754.255ENSXMAG00000013452upf3a9254.255Xiphophorus_maculatus
ENSANAG00000021713UPF3A8241.278ENSXMAG00000013680upf3b8841.606Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us