EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000021839 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 265 bases
Position: chrKZ204624.1:1895996-1896260
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000007530	LSM	PF01423.22	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000025308	-	228	-	ENSANAP00000007530	75 (aa)	-	A0A2K5CFQ6

Gene Model

Click here to download ENSANAG00000021839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000021839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000021839	-	77	47.619	ENSANAG00000020297	-	58	47.619
ENSANAG00000021839	-	77	46.032	ENSANAG00000032845	SNRPF	73	46.032
ENSANAG00000021839	-	100	86.250	ENSANAG00000030568	-	100	86.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000021839	-	100	86.250	ENSG00000164167	LSM6	100	86.250	Homo_sapiens
ENSANAG00000021839	-	100	82.500	ENSAPOG00000019832	lsm6	100	82.500	Acanthochromis_polyacanthus
ENSANAG00000021839	-	100	86.250	ENSAMEG00000016671	LSM6	100	86.250	Ailuropoda_melanoleuca
ENSANAG00000021839	-	100	82.500	ENSACIG00000016711	lsm6	100	82.500	Amphilophus_citrinellus
ENSANAG00000021839	-	100	82.500	ENSAOCG00000002110	lsm6	52	82.500	Amphiprion_ocellaris
ENSANAG00000021839	-	100	82.500	ENSAPEG00000023992	lsm6	100	82.500	Amphiprion_percula
ENSANAG00000021839	-	100	82.500	ENSATEG00000012610	lsm6	100	82.500	Anabas_testudineus
ENSANAG00000021839	-	96	85.714	ENSAPLG00000012594	LSM6	99	85.714	Anas_platyrhynchos
ENSANAG00000021839	-	100	86.250	ENSACAG00000004004	LSM6	100	86.250	Anolis_carolinensis
ENSANAG00000021839	-	100	82.500	ENSACLG00000025621	lsm6	100	82.500	Astatotilapia_calliptera
ENSANAG00000021839	-	100	83.750	ENSAMXG00000038738	lsm6	100	83.750	Astyanax_mexicanus
ENSANAG00000021839	-	100	86.250	ENSBTAG00000014060	LSM6	100	86.250	Bos_taurus
ENSANAG00000021839	-	100	83.750	ENSBTAG00000052085	-	100	83.750	Bos_taurus
ENSANAG00000021839	-	93	68.000	WBGene00003080	lsm-6	97	68.000	Caenorhabditis_elegans
ENSANAG00000021839	-	100	86.250	ENSCJAG00000002482	LSM6	100	86.250	Callithrix_jacchus
ENSANAG00000021839	-	100	86.250	ENSCAFG00000007738	LSM6	100	86.250	Canis_familiaris
ENSANAG00000021839	-	100	86.250	ENSCAFG00020025902	LSM6	100	86.250	Canis_lupus_dingo
ENSANAG00000021839	-	100	72.500	ENSCHIG00000024198	-	95	72.500	Capra_hircus
ENSANAG00000021839	-	87	90.769	ENSCHIG00000012864	-	92	90.769	Capra_hircus
ENSANAG00000021839	-	100	86.250	ENSCHIG00000010334	-	100	86.250	Capra_hircus
ENSANAG00000021839	-	89	79.104	ENSTSYG00000012759	-	86	79.104	Carlito_syrichta
ENSANAG00000021839	-	100	86.250	ENSTSYG00000026972	LSM6	100	86.250	Carlito_syrichta
ENSANAG00000021839	-	100	86.250	ENSCAPG00000008104	LSM6	100	86.250	Cavia_aperea
ENSANAG00000021839	-	87	87.692	ENSCAPG00000011179	-	100	87.692	Cavia_aperea
ENSANAG00000021839	-	100	86.250	ENSCPOG00000032655	LSM6	100	86.250	Cavia_porcellus
ENSANAG00000021839	-	100	86.250	ENSCCAG00000036437	LSM6	100	86.250	Cebus_capucinus
ENSANAG00000021839	-	99	84.810	ENSCCAG00000020665	-	99	84.810	Cebus_capucinus
ENSANAG00000021839	-	100	86.250	ENSCATG00000002770	-	100	86.250	Cercocebus_atys
ENSANAG00000021839	-	100	72.000	ENSCATG00000038799	-	100	72.000	Cercocebus_atys
ENSANAG00000021839	-	100	86.250	ENSCLAG00000005495	LSM6	100	86.250	Chinchilla_lanigera
ENSANAG00000021839	-	87	72.308	ENSCLAG00000005685	-	91	72.308	Chinchilla_lanigera
ENSANAG00000021839	-	100	86.250	ENSCSAG00000003421	LSM6	100	86.250	Chlorocebus_sabaeus
ENSANAG00000021839	-	100	78.667	ENSCHOG00000003420	LSM6	100	78.667	Choloepus_hoffmanni
ENSANAG00000021839	-	100	86.250	ENSCPBG00000027472	LSM6	84	86.250	Chrysemys_picta_bellii
ENSANAG00000021839	-	95	81.579	ENSCING00000019152	-	93	81.579	Ciona_intestinalis
ENSANAG00000021839	-	95	82.895	ENSCSAVG00000002065	-	93	82.895	Ciona_savignyi
ENSANAG00000021839	-	100	70.667	ENSCANG00000035214	-	100	70.667	Colobus_angolensis_palliatus
ENSANAG00000021839	-	100	86.250	ENSCANG00000006849	-	100	86.250	Colobus_angolensis_palliatus
ENSANAG00000021839	-	100	86.250	ENSCANG00000041263	-	100	86.250	Colobus_angolensis_palliatus
ENSANAG00000021839	-	100	86.250	ENSCGRG00001017142	Lsm6	100	86.250	Cricetulus_griseus_chok1gshd
ENSANAG00000021839	-	100	86.250	ENSCGRG00000008320	Lsm6	100	86.250	Cricetulus_griseus_crigri
ENSANAG00000021839	-	100	82.500	ENSCSEG00000000423	lsm6	100	82.500	Cynoglossus_semilaevis
ENSANAG00000021839	-	100	82.500	ENSCVAG00000001592	lsm6	100	82.500	Cyprinodon_variegatus
ENSANAG00000021839	-	100	83.750	ENSDARG00000036995	lsm6	100	83.750	Danio_rerio
ENSANAG00000021839	-	87	90.769	ENSDNOG00000040186	-	70	90.769	Dasypus_novemcinctus
ENSANAG00000021839	-	100	85.000	ENSDNOG00000044848	-	100	85.000	Dasypus_novemcinctus
ENSANAG00000021839	-	100	86.250	ENSDORG00000000933	Lsm6	100	86.250	Dipodomys_ordii
ENSANAG00000021839	-	96	75.325	FBgn0034564	CG9344	97	75.325	Drosophila_melanogaster
ENSANAG00000021839	-	57	81.250	ENSETEG00000013098	LSM6	100	81.250	Echinops_telfairi
ENSANAG00000021839	-	100	85.000	ENSEBUG00000017073	lsm6	100	85.000	Eptatretus_burgeri
ENSANAG00000021839	-	87	90.769	ENSEASG00005001533	LSM6	68	90.769	Equus_asinus_asinus
ENSANAG00000021839	-	100	86.250	ENSECAG00000021036	LSM6	100	86.250	Equus_caballus
ENSANAG00000021839	-	99	59.494	ENSEEUG00000002101	LSM6	100	59.494	Erinaceus_europaeus
ENSANAG00000021839	-	100	83.750	ENSELUG00000014301	LSM6	100	83.750	Esox_lucius
ENSANAG00000021839	-	100	86.250	ENSFCAG00000003047	LSM6	100	86.250	Felis_catus
ENSANAG00000021839	-	100	86.250	ENSFALG00000005509	LSM6	92	86.250	Ficedula_albicollis
ENSANAG00000021839	-	100	86.250	ENSFDAG00000020913	-	100	86.250	Fukomys_damarensis
ENSANAG00000021839	-	100	77.500	ENSFDAG00000019073	-	100	77.500	Fukomys_damarensis
ENSANAG00000021839	-	100	82.500	ENSFHEG00000007948	lsm6	100	82.500	Fundulus_heteroclitus
ENSANAG00000021839	-	100	82.500	ENSGMOG00000015550	lsm6	100	82.500	Gadus_morhua
ENSANAG00000021839	-	100	86.250	ENSGALG00000009985	LSM6	100	86.250	Gallus_gallus
ENSANAG00000021839	-	100	82.500	ENSGAFG00000017763	lsm6	100	82.500	Gambusia_affinis
ENSANAG00000021839	-	99	83.544	ENSGACG00000017223	lsm6	99	83.544	Gasterosteus_aculeatus
ENSANAG00000021839	-	100	86.250	ENSGAGG00000020980	LSM6	100	86.250	Gopherus_agassizii
ENSANAG00000021839	-	100	86.250	ENSGGOG00000001310	LSM6	100	86.250	Gorilla_gorilla
ENSANAG00000021839	-	100	82.500	ENSHBUG00000008618	lsm6	100	82.500	Haplochromis_burtoni
ENSANAG00000021839	-	100	86.250	ENSHGLG00000000205	LSM6	100	86.250	Heterocephalus_glaber_female
ENSANAG00000021839	-	100	86.250	ENSHGLG00100014341	LSM6	100	86.250	Heterocephalus_glaber_male
ENSANAG00000021839	-	100	82.500	ENSHCOG00000005591	lsm6	100	82.500	Hippocampus_comes
ENSANAG00000021839	-	100	82.500	ENSIPUG00000004508	lsm6	100	82.500	Ictalurus_punctatus
ENSANAG00000021839	-	100	86.250	ENSSTOG00000002678	LSM6	100	86.250	Ictidomys_tridecemlineatus
ENSANAG00000021839	-	96	67.532	ENSJJAG00000016942	-	97	67.532	Jaculus_jaculus
ENSANAG00000021839	-	100	78.750	ENSJJAG00000011211	-	100	78.750	Jaculus_jaculus
ENSANAG00000021839	-	100	86.250	ENSJJAG00000013845	-	100	86.250	Jaculus_jaculus
ENSANAG00000021839	-	100	82.500	ENSKMAG00000004105	lsm6	100	82.500	Kryptolebias_marmoratus
ENSANAG00000021839	-	100	82.500	ENSLBEG00000018441	lsm6	100	82.500	Labrus_bergylta
ENSANAG00000021839	-	100	86.250	ENSLACG00000006937	LSM6	100	86.250	Latimeria_chalumnae
ENSANAG00000021839	-	100	82.500	ENSLOCG00000017683	-	100	82.500	Lepisosteus_oculatus
ENSANAG00000021839	-	100	83.750	ENSLOCG00000008852	lsm6	100	83.750	Lepisosteus_oculatus
ENSANAG00000021839	-	100	86.250	ENSLAFG00000001952	LSM6	100	86.250	Loxodonta_africana
ENSANAG00000021839	-	100	86.250	ENSMFAG00000033073	LSM6	100	86.250	Macaca_fascicularis
ENSANAG00000021839	-	100	73.333	ENSMNEG00000040412	-	100	73.333	Macaca_nemestrina
ENSANAG00000021839	-	100	86.250	ENSMNEG00000034820	-	100	86.250	Macaca_nemestrina
ENSANAG00000021839	-	100	86.250	ENSMLEG00000035153	LSM6	100	86.250	Mandrillus_leucophaeus
ENSANAG00000021839	-	100	82.500	ENSMAMG00000014029	lsm6	100	82.500	Mastacembelus_armatus
ENSANAG00000021839	-	100	82.500	ENSMZEG00005009146	lsm6	100	82.500	Maylandia_zebra
ENSANAG00000021839	-	100	86.250	ENSMGAG00000003802	LSM6	100	86.250	Meleagris_gallopavo
ENSANAG00000021839	-	100	86.250	ENSMAUG00000014938	Lsm6	100	86.250	Mesocricetus_auratus
ENSANAG00000021839	-	87	90.769	ENSMICG00000047411	-	76	90.769	Microcebus_murinus
ENSANAG00000021839	-	100	86.250	ENSMICG00000042599	LSM6	100	86.250	Microcebus_murinus
ENSANAG00000021839	-	100	86.250	ENSMOCG00000020049	Lsm6	100	86.250	Microtus_ochrogaster
ENSANAG00000021839	-	100	82.500	ENSMMOG00000005470	lsm6	100	82.500	Mola_mola
ENSANAG00000021839	-	100	76.250	ENSMMOG00000007379	-	100	76.250	Mola_mola
ENSANAG00000021839	-	100	86.250	ENSMODG00000000526	LSM6	100	86.250	Monodelphis_domestica
ENSANAG00000021839	-	100	82.500	ENSMALG00000002419	lsm6	100	82.500	Monopterus_albus
ENSANAG00000021839	-	100	86.250	MGP_CAROLIEiJ_G0031245	Lsm6	100	86.250	Mus_caroli
ENSANAG00000021839	-	100	86.250	ENSMUSG00000031683	Lsm6	100	86.250	Mus_musculus
ENSANAG00000021839	-	100	86.250	MGP_PahariEiJ_G0022851	Lsm6	100	86.250	Mus_pahari
ENSANAG00000021839	-	100	86.250	MGP_SPRETEiJ_G0032365	Lsm6	100	86.250	Mus_spretus
ENSANAG00000021839	-	99	86.076	ENSMPUG00000006936	LSM6	92	86.076	Mustela_putorius_furo
ENSANAG00000021839	-	100	86.250	ENSMLUG00000026355	LSM6	100	86.250	Myotis_lucifugus
ENSANAG00000021839	-	100	86.250	ENSNGAG00000019116	Lsm6	100	86.250	Nannospalax_galili
ENSANAG00000021839	-	100	82.500	ENSNBRG00000004887	lsm6	100	82.500	Neolamprologus_brichardi
ENSANAG00000021839	-	100	86.250	ENSNLEG00000005584	LSM6	100	86.250	Nomascus_leucogenys
ENSANAG00000021839	-	100	84.810	ENSOPRG00000011199	LSM6	100	84.810	Ochotona_princeps
ENSANAG00000021839	-	100	85.000	ENSODEG00000002307	-	100	85.000	Octodon_degus
ENSANAG00000021839	-	100	83.750	ENSODEG00000020420	-	100	83.750	Octodon_degus
ENSANAG00000021839	-	96	79.221	ENSODEG00000018684	-	100	79.221	Octodon_degus
ENSANAG00000021839	-	100	83.750	ENSODEG00000019419	-	100	83.750	Octodon_degus
ENSANAG00000021839	-	100	82.500	ENSONIG00000010005	lsm6	100	82.500	Oreochromis_niloticus
ENSANAG00000021839	-	73	71.667	ENSOANG00000006894	-	79	71.667	Ornithorhynchus_anatinus
ENSANAG00000021839	-	73	71.667	ENSOANG00000006895	-	79	71.667	Ornithorhynchus_anatinus
ENSANAG00000021839	-	100	81.250	ENSORLG00000024158	lsm6	100	81.250	Oryzias_latipes
ENSANAG00000021839	-	100	81.250	ENSORLG00020017383	lsm6	100	81.250	Oryzias_latipes_hni
ENSANAG00000021839	-	100	81.250	ENSORLG00015016903	lsm6	100	81.250	Oryzias_latipes_hsok
ENSANAG00000021839	-	100	82.500	ENSOMEG00000000074	lsm6	100	82.500	Oryzias_melastigma
ENSANAG00000021839	-	100	86.250	ENSOGAG00000033153	-	100	86.250	Otolemur_garnettii
ENSANAG00000021839	-	100	86.250	ENSOGAG00000026665	-	100	86.250	Otolemur_garnettii
ENSANAG00000021839	-	87	90.769	ENSOARG00000008509	-	83	90.769	Ovis_aries
ENSANAG00000021839	-	99	79.747	ENSOARG00000011641	-	92	79.747	Ovis_aries
ENSANAG00000021839	-	100	86.250	ENSPPAG00000037929	LSM6	100	86.250	Pan_paniscus
ENSANAG00000021839	-	100	86.250	ENSPPRG00000012806	LSM6	100	86.250	Panthera_pardus
ENSANAG00000021839	-	100	86.250	ENSPTIG00000019769	LSM6	100	86.250	Panthera_tigris_altaica
ENSANAG00000021839	-	100	86.250	ENSPTRG00000016488	LSM6	100	86.250	Pan_troglodytes
ENSANAG00000021839	-	100	86.250	ENSPANG00000006552	LSM6	100	86.250	Papio_anubis
ENSANAG00000021839	-	100	83.750	ENSPKIG00000016176	lsm6	100	83.750	Paramormyrops_kingsleyae
ENSANAG00000021839	-	100	86.250	ENSPSIG00000016942	LSM6	100	86.250	Pelodiscus_sinensis
ENSANAG00000021839	-	100	82.500	ENSPMGG00000018004	lsm6	100	82.500	Periophthalmus_magnuspinnatus
ENSANAG00000021839	-	100	86.250	ENSPEMG00000012410	Lsm6	100	86.250	Peromyscus_maniculatus_bairdii
ENSANAG00000021839	-	100	85.000	ENSPMAG00000006949	lsm6	100	85.000	Petromyzon_marinus
ENSANAG00000021839	-	100	86.250	ENSPCIG00000023469	LSM6	76	90.769	Phascolarctos_cinereus
ENSANAG00000021839	-	100	82.500	ENSPFOG00000008881	lsm6	100	82.500	Poecilia_formosa
ENSANAG00000021839	-	100	82.500	ENSPLAG00000003202	lsm6	100	82.500	Poecilia_latipinna
ENSANAG00000021839	-	100	82.500	ENSPMEG00000004000	lsm6	100	82.500	Poecilia_mexicana
ENSANAG00000021839	-	100	82.500	ENSPREG00000023235	lsm6	100	82.500	Poecilia_reticulata
ENSANAG00000021839	-	100	86.250	ENSPPYG00000015105	LSM6	100	86.250	Pongo_abelii
ENSANAG00000021839	-	100	86.250	ENSPCOG00000013899	LSM6	100	86.250	Propithecus_coquereli
ENSANAG00000021839	-	100	82.500	ENSPNYG00000012614	lsm6	100	82.500	Pundamilia_nyererei
ENSANAG00000021839	-	100	83.750	ENSPNAG00000018779	lsm6	100	83.750	Pygocentrus_nattereri
ENSANAG00000021839	-	100	86.250	ENSRNOG00000049370	LOC100360750	100	86.250	Rattus_norvegicus
ENSANAG00000021839	-	100	86.250	ENSRNOG00000030374	Lsm6	100	86.250	Rattus_norvegicus
ENSANAG00000021839	-	100	86.250	ENSRBIG00000027878	LSM6	100	86.250	Rhinopithecus_bieti
ENSANAG00000021839	-	100	86.250	ENSRROG00000024868	LSM6	100	86.250	Rhinopithecus_roxellana
ENSANAG00000021839	-	57	44.186	YDR378C	-	85	38.356	Saccharomyces_cerevisiae
ENSANAG00000021839	-	100	86.250	ENSSBOG00000021229	-	100	86.250	Saimiri_boliviensis_boliviensis
ENSANAG00000021839	-	100	63.750	ENSSBOG00000028103	-	100	63.750	Saimiri_boliviensis_boliviensis
ENSANAG00000021839	-	100	83.750	ENSSFOG00015016480	lsm6	100	83.750	Scleropages_formosus
ENSANAG00000021839	-	100	82.500	ENSSMAG00000004550	lsm6	100	82.500	Scophthalmus_maximus
ENSANAG00000021839	-	100	82.500	ENSSDUG00000020459	lsm6	50	82.500	Seriola_dumerili
ENSANAG00000021839	-	84	92.063	ENSSLDG00000004136	-	54	92.063	Seriola_lalandi_dorsalis
ENSANAG00000021839	-	100	82.500	ENSSLDG00000020533	lsm6	83	82.500	Seriola_lalandi_dorsalis
ENSANAG00000021839	-	57	81.250	ENSSARG00000000689	LSM6	100	81.250	Sorex_araneus
ENSANAG00000021839	-	100	86.250	ENSSPUG00000008657	LSM6	100	86.250	Sphenodon_punctatus
ENSANAG00000021839	-	100	82.500	ENSSPAG00000003246	lsm6	100	82.500	Stegastes_partitus
ENSANAG00000021839	-	100	86.250	ENSSSCG00000035973	LSM6	100	86.250	Sus_scrofa
ENSANAG00000021839	-	100	86.250	ENSTGUG00000002663	LSM6	100	86.250	Taeniopygia_guttata
ENSANAG00000021839	-	100	82.500	ENSTRUG00000023398	lsm6	100	82.500	Takifugu_rubripes
ENSANAG00000021839	-	100	82.500	ENSTNIG00000017725	lsm6	100	82.500	Tetraodon_nigroviridis
ENSANAG00000021839	-	100	86.250	ENSTTRG00000004609	LSM6	100	86.250	Tursiops_truncatus
ENSANAG00000021839	-	87	90.769	ENSUAMG00000014213	LSM6	53	90.769	Ursus_americanus
ENSANAG00000021839	-	87	90.769	ENSUMAG00000015727	LSM6	53	90.769	Ursus_maritimus
ENSANAG00000021839	-	100	86.250	ENSVPAG00000006922	LSM6	100	86.250	Vicugna_pacos
ENSANAG00000021839	-	100	86.250	ENSVVUG00000009254	LSM6	68	86.250	Vulpes_vulpes
ENSANAG00000021839	-	100	86.250	ENSXETG00000023683	lsm6	100	86.250	Xenopus_tropicalis
ENSANAG00000021839	-	100	82.500	ENSXMAG00000009606	lsm6	100	82.500	Xiphophorus_maculatus