EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000022464 (Gene tree)
Gene ID: 105723693
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 15919 bases
Position: chrKZ200528.1:1422615-1438533
Accession: 105723693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000009055	PRP4	PF08799.11	7.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000026844	PRPF4-201	1629	XM_012461857	ENSANAP00000009055	542 (aa)	XP_012317280	A0A2K5CK13

Gene Model

Click here to download ENSANAG00000022464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000022464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000022464	PRPF4	54	30.000	ENSANAG00000030897	POC1A	82	30.000
ENSANAG00000022464	PRPF4	54	32.653	ENSANAG00000030472	TBL3	66	32.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000022464	PRPF4	96	99.616	ENSG00000136875	PRPF4	100	99.616	Homo_sapiens
ENSANAG00000022464	PRPF4	93	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSANAG00000022464	PRPF4	98	98.502	ENSAMEG00000013048	PRPF4	100	98.502	Ailuropoda_melanoleuca
ENSANAG00000022464	PRPF4	93	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSANAG00000022464	PRPF4	93	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSANAG00000022464	PRPF4	93	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSANAG00000022464	PRPF4	93	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSANAG00000022464	PRPF4	97	88.952	ENSAPLG00000006534	PRPF4	98	88.952	Anas_platyrhynchos
ENSANAG00000022464	PRPF4	96	90.057	ENSACAG00000015110	PRPF4	100	90.057	Anolis_carolinensis
ENSANAG00000022464	PRPF4	93	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSANAG00000022464	PRPF4	93	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSANAG00000022464	PRPF4	96	99.040	ENSBTAG00000004571	PRPF4	100	99.040	Bos_taurus
ENSANAG00000022464	PRPF4	87	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSANAG00000022464	PRPF4	96	99.808	ENSCJAG00000017856	PRPF4	100	99.808	Callithrix_jacchus
ENSANAG00000022464	PRPF4	96	99.617	ENSCAFG00000003224	PRPF4	97	99.617	Canis_familiaris
ENSANAG00000022464	PRPF4	96	99.808	ENSCAFG00020022637	PRPF4	100	99.808	Canis_lupus_dingo
ENSANAG00000022464	PRPF4	96	99.234	ENSCHIG00000024648	-	100	99.234	Capra_hircus
ENSANAG00000022464	PRPF4	100	97.417	ENSTSYG00000010366	PRPF4	100	99.616	Carlito_syrichta
ENSANAG00000022464	PRPF4	85	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSANAG00000022464	PRPF4	96	99.232	ENSCPOG00000010747	-	100	99.232	Cavia_porcellus
ENSANAG00000022464	PRPF4	96	92.706	ENSCPOG00000014729	-	100	92.706	Cavia_porcellus
ENSANAG00000022464	PRPF4	100	98.155	ENSCCAG00000028990	PRPF4	100	99.808	Cebus_capucinus
ENSANAG00000022464	PRPF4	100	97.974	ENSCATG00000021552	PRPF4	100	99.616	Cercocebus_atys
ENSANAG00000022464	PRPF4	96	99.424	ENSCLAG00000013448	PRPF4	100	99.424	Chinchilla_lanigera
ENSANAG00000022464	PRPF4	83	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSANAG00000022464	PRPF4	97	89.924	ENSCPBG00000019136	PRPF4	76	89.924	Chrysemys_picta_bellii
ENSANAG00000022464	PRPF4	93	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSANAG00000022464	PRPF4	92	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSANAG00000022464	PRPF4	100	97.790	ENSCANG00000003246	PRPF4	100	99.808	Colobus_angolensis_palliatus
ENSANAG00000022464	PRPF4	96	99.616	ENSCGRG00001016992	Prpf4	100	99.616	Cricetulus_griseus_chok1gshd
ENSANAG00000022464	PRPF4	96	99.616	ENSCGRG00000017560	Prpf4	100	99.616	Cricetulus_griseus_crigri
ENSANAG00000022464	PRPF4	93	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSANAG00000022464	PRPF4	93	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSANAG00000022464	PRPF4	96	99.234	ENSDNOG00000013203	PRPF4	100	99.234	Dasypus_novemcinctus
ENSANAG00000022464	PRPF4	96	99.616	ENSDORG00000026275	Prpf4	100	99.616	Dipodomys_ordii
ENSANAG00000022464	PRPF4	84	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSANAG00000022464	PRPF4	96	97.514	ENSETEG00000020389	PRPF4	100	97.514	Echinops_telfairi
ENSANAG00000022464	PRPF4	92	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSANAG00000022464	PRPF4	96	100.000	ENSEASG00005022678	PRPF4	100	100.000	Equus_asinus_asinus
ENSANAG00000022464	PRPF4	96	100.000	ENSECAG00000007072	PRPF4	100	100.000	Equus_caballus
ENSANAG00000022464	PRPF4	96	78.603	ENSEEUG00000007480	PRPF4	100	78.603	Erinaceus_europaeus
ENSANAG00000022464	PRPF4	93	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSANAG00000022464	PRPF4	96	99.808	ENSFCAG00000005514	PRPF4	100	99.808	Felis_catus
ENSANAG00000022464	PRPF4	94	88.341	ENSFALG00000005423	PRPF4	90	85.591	Ficedula_albicollis
ENSANAG00000022464	PRPF4	96	99.232	ENSFDAG00000005839	PRPF4	100	99.232	Fukomys_damarensis
ENSANAG00000022464	PRPF4	93	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSANAG00000022464	PRPF4	94	90.215	ENSGALG00000008857	PRPF4	97	88.528	Gallus_gallus
ENSANAG00000022464	PRPF4	62	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSANAG00000022464	PRPF4	92	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSANAG00000022464	PRPF4	97	89.734	ENSGAGG00000025029	PRPF4	97	89.734	Gopherus_agassizii
ENSANAG00000022464	PRPF4	99	97.944	ENSGGOG00000006943	PRPF4	100	99.616	Gorilla_gorilla
ENSANAG00000022464	PRPF4	93	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSANAG00000022464	PRPF4	96	82.027	ENSHGLG00000016628	-	100	82.983	Heterocephalus_glaber_female
ENSANAG00000022464	PRPF4	96	99.232	ENSHGLG00000015191	PRPF4	100	99.232	Heterocephalus_glaber_female
ENSANAG00000022464	PRPF4	96	80.614	ENSHGLG00000003838	-	100	80.614	Heterocephalus_glaber_female
ENSANAG00000022464	PRPF4	96	80.614	ENSHGLG00100005571	-	100	80.614	Heterocephalus_glaber_male
ENSANAG00000022464	PRPF4	93	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSANAG00000022464	PRPF4	96	99.424	ENSSTOG00000027833	PRPF4	100	99.424	Ictidomys_tridecemlineatus
ENSANAG00000022464	PRPF4	96	99.616	ENSJJAG00000008838	Prpf4	100	99.616	Jaculus_jaculus
ENSANAG00000022464	PRPF4	93	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSANAG00000022464	PRPF4	93	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSANAG00000022464	PRPF4	95	80.347	ENSLACG00000016317	PRPF4	99	80.347	Latimeria_chalumnae
ENSANAG00000022464	PRPF4	93	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSANAG00000022464	PRPF4	96	99.042	ENSLAFG00000018225	PRPF4	100	99.042	Loxodonta_africana
ENSANAG00000022464	PRPF4	100	97.790	ENSMFAG00000039397	PRPF4	100	99.424	Macaca_fascicularis
ENSANAG00000022464	PRPF4	96	99.616	ENSMMUG00000005844	PRPF4	100	99.616	Macaca_mulatta
ENSANAG00000022464	PRPF4	96	89.060	ENSMNEG00000033737	PRPF4	100	89.060	Macaca_nemestrina
ENSANAG00000022464	PRPF4	100	97.974	ENSMLEG00000040284	PRPF4	100	99.616	Mandrillus_leucophaeus
ENSANAG00000022464	PRPF4	93	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSANAG00000022464	PRPF4	93	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSANAG00000022464	PRPF4	97	87.810	ENSMGAG00000001796	PRPF4	98	87.810	Meleagris_gallopavo
ENSANAG00000022464	PRPF4	96	99.040	ENSMAUG00000018022	Prpf4	100	99.040	Mesocricetus_auratus
ENSANAG00000022464	PRPF4	100	97.053	ENSMICG00000015022	PRPF4	100	98.659	Microcebus_murinus
ENSANAG00000022464	PRPF4	96	99.040	ENSMOCG00000018273	Prpf4	100	99.040	Microtus_ochrogaster
ENSANAG00000022464	PRPF4	93	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSANAG00000022464	PRPF4	96	95.029	ENSMODG00000004444	-	100	95.029	Monodelphis_domestica
ENSANAG00000022464	PRPF4	99	92.791	ENSMODG00000025096	-	99	92.791	Monodelphis_domestica
ENSANAG00000022464	PRPF4	93	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSANAG00000022464	PRPF4	96	99.424	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.424	Mus_caroli
ENSANAG00000022464	PRPF4	96	99.424	ENSMUSG00000066148	Prpf4	100	99.424	Mus_musculus
ENSANAG00000022464	PRPF4	96	99.232	MGP_PahariEiJ_G0028413	Prpf4	100	99.232	Mus_pahari
ENSANAG00000022464	PRPF4	96	99.424	MGP_SPRETEiJ_G0027042	Prpf4	100	99.424	Mus_spretus
ENSANAG00000022464	PRPF4	96	99.808	ENSMPUG00000007883	PRPF4	100	99.808	Mustela_putorius_furo
ENSANAG00000022464	PRPF4	98	96.604	ENSMLUG00000008626	-	99	96.604	Myotis_lucifugus
ENSANAG00000022464	PRPF4	98	98.124	ENSMLUG00000015309	-	99	98.124	Myotis_lucifugus
ENSANAG00000022464	PRPF4	96	94.242	ENSNGAG00000000468	Prpf4	100	94.242	Nannospalax_galili
ENSANAG00000022464	PRPF4	93	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSANAG00000022464	PRPF4	100	98.155	ENSNLEG00000016647	PRPF4	100	100.000	Nomascus_leucogenys
ENSANAG00000022464	PRPF4	95	95.136	ENSMEUG00000013256	PRPF4	100	95.136	Notamacropus_eugenii
ENSANAG00000022464	PRPF4	96	99.042	ENSOPRG00000005302	PRPF4	100	99.042	Ochotona_princeps
ENSANAG00000022464	PRPF4	96	99.616	ENSODEG00000018147	PRPF4	100	99.616	Octodon_degus
ENSANAG00000022464	PRPF4	96	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSANAG00000022464	PRPF4	96	99.808	ENSOCUG00000005046	PRPF4	100	99.808	Oryctolagus_cuniculus
ENSANAG00000022464	PRPF4	93	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSANAG00000022464	PRPF4	93	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSANAG00000022464	PRPF4	93	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSANAG00000022464	PRPF4	96	94.626	ENSOGAG00000007802	PRPF4	98	94.626	Otolemur_garnettii
ENSANAG00000022464	PRPF4	100	97.786	ENSOARG00000006319	PRPF4	100	97.786	Ovis_aries
ENSANAG00000022464	PRPF4	99	97.944	ENSPPAG00000041797	PRPF4	100	99.616	Pan_paniscus
ENSANAG00000022464	PRPF4	96	100.000	ENSPPRG00000014360	PRPF4	100	100.000	Panthera_pardus
ENSANAG00000022464	PRPF4	96	100.000	ENSPTIG00000009574	PRPF4	100	100.000	Panthera_tigris_altaica
ENSANAG00000022464	PRPF4	99	97.944	ENSPTRG00000021274	PRPF4	100	99.425	Pan_troglodytes
ENSANAG00000022464	PRPF4	100	97.790	ENSPANG00000025776	PRPF4	100	97.790	Papio_anubis
ENSANAG00000022464	PRPF4	93	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSANAG00000022464	PRPF4	96	89.827	ENSPSIG00000010713	PRPF4	91	90.347	Pelodiscus_sinensis
ENSANAG00000022464	PRPF4	95	58.716	ENSPMGG00000000997	prpf4	99	58.716	Periophthalmus_magnuspinnatus
ENSANAG00000022464	PRPF4	96	99.616	ENSPEMG00000024115	Prpf4	100	99.616	Peromyscus_maniculatus_bairdii
ENSANAG00000022464	PRPF4	95	95.136	ENSPCIG00000003821	PRPF4	99	95.136	Phascolarctos_cinereus
ENSANAG00000022464	PRPF4	92	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSANAG00000022464	PRPF4	60	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSANAG00000022464	PRPF4	88	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSANAG00000022464	PRPF4	94	99.415	ENSPCAG00000002561	PRPF4	99	99.415	Procavia_capensis
ENSANAG00000022464	PRPF4	100	97.606	ENSPCOG00000011975	PRPF4	100	99.424	Propithecus_coquereli
ENSANAG00000022464	PRPF4	96	95.785	ENSPVAG00000004708	PRPF4	100	95.785	Pteropus_vampyrus
ENSANAG00000022464	PRPF4	93	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSANAG00000022464	PRPF4	93	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSANAG00000022464	PRPF4	96	99.232	ENSRNOG00000014777	Prpf4	100	99.232	Rattus_norvegicus
ENSANAG00000022464	PRPF4	100	98.343	ENSRBIG00000040221	PRPF4	100	99.808	Rhinopithecus_bieti
ENSANAG00000022464	PRPF4	100	98.158	ENSRROG00000040240	PRPF4	100	99.808	Rhinopithecus_roxellana
ENSANAG00000022464	PRPF4	96	95.602	ENSSHAG00000017658	PRPF4	100	95.602	Sarcophilus_harrisii
ENSANAG00000022464	PRPF4	93	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSANAG00000022464	PRPF4	93	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSANAG00000022464	PRPF4	93	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSANAG00000022464	PRPF4	93	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSANAG00000022464	PRPF4	96	90.595	ENSSPUG00000015582	PRPF4	100	90.595	Sphenodon_punctatus
ENSANAG00000022464	PRPF4	93	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSANAG00000022464	PRPF4	96	100.000	ENSSSCG00000024648	PRPF4	100	100.000	Sus_scrofa
ENSANAG00000022464	PRPF4	91	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSANAG00000022464	PRPF4	93	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSANAG00000022464	PRPF4	93	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSANAG00000022464	PRPF4	96	90.805	ENSTBEG00000000821	PRPF4	100	90.805	Tupaia_belangeri
ENSANAG00000022464	PRPF4	79	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSANAG00000022464	PRPF4	62	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSANAG00000022464	PRPF4	96	99.040	ENSUMAG00000019375	PRPF4	100	99.040	Ursus_maritimus
ENSANAG00000022464	PRPF4	96	99.234	ENSVPAG00000005281	PRPF4	100	99.234	Vicugna_pacos
ENSANAG00000022464	PRPF4	96	98.667	ENSVVUG00000002476	PRPF4	100	98.667	Vulpes_vulpes
ENSANAG00000022464	PRPF4	67	57.735	ENSXCOG00000006101	prpf4	93	59.360	Xiphophorus_couchianus
ENSANAG00000022464	PRPF4	84	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus