EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000022870 (Gene tree)
Gene ID: 105714140
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 44752 bases
Position: chrKZ203535.1:5144119-5188870
Accession: 105714140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000009781	TruB_N	PF01509.18	3.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000027575	TRUB1-201	1112	XM_012448030	ENSANAP00000009781	351 (aa)	XP_012303453	A0A2K5CM77

Gene Model

Click here to download ENSANAG00000022870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000022870's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000022870	TRUB1	71	30.903	ENSANAG00000036234	TRUB2	92	30.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000022870	TRUB1	100	96.011	ENSG00000165832	TRUB1	96	97.024	Homo_sapiens
ENSANAG00000022870	TRUB1	70	68.571	ENSAPOG00000020565	trub1	89	68.293	Acanthochromis_polyacanthus
ENSANAG00000022870	TRUB1	95	94.065	ENSAMEG00000014931	TRUB1	95	94.048	Ailuropoda_melanoleuca
ENSANAG00000022870	TRUB1	81	57.746	ENSACIG00000003060	trub1	94	57.746	Amphilophus_citrinellus
ENSANAG00000022870	TRUB1	70	68.571	ENSAOCG00000017188	trub1	89	68.293	Amphiprion_ocellaris
ENSANAG00000022870	TRUB1	70	67.886	ENSAPEG00000015209	trub1	89	67.886	Amphiprion_percula
ENSANAG00000022870	TRUB1	69	68.880	ENSATEG00000023291	trub1	86	68.880	Anabas_testudineus
ENSANAG00000022870	TRUB1	78	75.636	ENSAPLG00000006808	TRUB1	99	75.636	Anas_platyrhynchos
ENSANAG00000022870	TRUB1	77	71.004	ENSACAG00000009282	TRUB1	97	71.004	Anolis_carolinensis
ENSANAG00000022870	TRUB1	72	67.063	ENSACLG00000000823	trub1	91	67.063	Astatotilapia_calliptera
ENSANAG00000022870	TRUB1	77	65.314	ENSAMXG00000015845	trub1	90	65.314	Astyanax_mexicanus
ENSANAG00000022870	TRUB1	97	92.669	ENSBTAG00000012955	TRUB1	95	93.413	Bos_taurus
ENSANAG00000022870	TRUB1	100	98.860	ENSCJAG00000047815	TRUB1	100	98.860	Callithrix_jacchus
ENSANAG00000022870	TRUB1	99	93.696	ENSCAFG00000011688	TRUB1	95	94.910	Canis_familiaris
ENSANAG00000022870	TRUB1	99	93.983	ENSCAFG00020013237	TRUB1	95	95.210	Canis_lupus_dingo
ENSANAG00000022870	TRUB1	99	92.550	ENSCHIG00000020884	TRUB1	99	92.550	Capra_hircus
ENSANAG00000022870	TRUB1	100	90.057	ENSTSYG00000000446	TRUB1	96	92.285	Carlito_syrichta
ENSANAG00000022870	TRUB1	72	84.646	ENSCAPG00000017088	TRUB1	100	84.646	Cavia_aperea
ENSANAG00000022870	TRUB1	70	85.772	ENSCPOG00000040236	-	95	87.879	Cavia_porcellus
ENSANAG00000022870	TRUB1	71	80.321	ENSCPOG00000030129	-	76	93.846	Cavia_porcellus
ENSANAG00000022870	TRUB1	100	98.006	ENSCCAG00000028842	TRUB1	100	98.006	Cebus_capucinus
ENSANAG00000022870	TRUB1	100	97.151	ENSCATG00000033431	TRUB1	100	97.151	Cercocebus_atys
ENSANAG00000022870	TRUB1	70	89.837	ENSCLAG00000008664	TRUB1	95	91.775	Chinchilla_lanigera
ENSANAG00000022870	TRUB1	100	97.436	ENSCSAG00000004891	TRUB1	100	97.436	Chlorocebus_sabaeus
ENSANAG00000022870	TRUB1	99	79.310	ENSCHOG00000011931	TRUB1	95	79.819	Choloepus_hoffmanni
ENSANAG00000022870	TRUB1	77	79.412	ENSCPBG00000003051	TRUB1	94	79.412	Chrysemys_picta_bellii
ENSANAG00000022870	TRUB1	100	97.436	ENSCANG00000029445	TRUB1	100	97.436	Colobus_angolensis_palliatus
ENSANAG00000022870	TRUB1	72	88.142	ENSCGRG00001016772	-	90	79.730	Cricetulus_griseus_chok1gshd
ENSANAG00000022870	TRUB1	79	79.928	ENSCGRG00001010322	-	79	79.863	Cricetulus_griseus_chok1gshd
ENSANAG00000022870	TRUB1	79	89.247	ENSCGRG00000010806	Trub1	91	88.514	Cricetulus_griseus_crigri
ENSANAG00000022870	TRUB1	73	62.500	ENSCSEG00000011261	trub1	83	62.500	Cynoglossus_semilaevis
ENSANAG00000022870	TRUB1	74	65.891	ENSCVAG00000008791	trub1	79	66.023	Cyprinodon_variegatus
ENSANAG00000022870	TRUB1	74	67.181	ENSDARG00000053805	trub1	89	67.181	Danio_rerio
ENSANAG00000022870	TRUB1	97	87.906	ENSDNOG00000001069	TRUB1	99	86.819	Dasypus_novemcinctus
ENSANAG00000022870	TRUB1	99	89.685	ENSDORG00000010431	Trub1	95	90.419	Dipodomys_ordii
ENSANAG00000022870	TRUB1	81	76.961	ENSETEG00000009183	TRUB1	81	77.941	Echinops_telfairi
ENSANAG00000022870	TRUB1	95	94.328	ENSEASG00005014739	TRUB1	95	94.311	Equus_asinus_asinus
ENSANAG00000022870	TRUB1	95	94.328	ENSECAG00000007177	TRUB1	95	94.311	Equus_caballus
ENSANAG00000022870	TRUB1	99	76.190	ENSEEUG00000013993	TRUB1	83	82.550	Erinaceus_europaeus
ENSANAG00000022870	TRUB1	70	69.796	ENSELUG00000000502	trub1	86	69.796	Esox_lucius
ENSANAG00000022870	TRUB1	95	94.030	ENSFCAG00000031927	TRUB1	96	94.012	Felis_catus
ENSANAG00000022870	TRUB1	68	76.250	ENSFALG00000002232	TRUB1	92	76.250	Ficedula_albicollis
ENSANAG00000022870	TRUB1	70	89.344	ENSFDAG00000008140	TRUB1	95	91.775	Fukomys_damarensis
ENSANAG00000022870	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSANAG00000022870	TRUB1	77	75.000	ENSGALG00000009091	TRUB1	97	74.057	Gallus_gallus
ENSANAG00000022870	TRUB1	69	64.344	ENSGAFG00000009193	trub1	86	64.344	Gambusia_affinis
ENSANAG00000022870	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSANAG00000022870	TRUB1	83	77.320	ENSGAGG00000009758	TRUB1	81	78.169	Gopherus_agassizii
ENSANAG00000022870	TRUB1	100	96.581	ENSGGOG00000004583	TRUB1	96	97.619	Gorilla_gorilla
ENSANAG00000022870	TRUB1	72	67.063	ENSHBUG00000016787	trub1	91	67.063	Haplochromis_burtoni
ENSANAG00000022870	TRUB1	99	87.679	ENSHGLG00000015314	TRUB1	96	88.922	Heterocephalus_glaber_female
ENSANAG00000022870	TRUB1	70	86.992	ENSHGLG00100009183	TRUB1	95	87.013	Heterocephalus_glaber_male
ENSANAG00000022870	TRUB1	70	68.163	ENSHCOG00000017877	trub1	89	68.163	Hippocampus_comes
ENSANAG00000022870	TRUB1	79	65.580	ENSIPUG00000017559	trub1	97	65.580	Ictalurus_punctatus
ENSANAG00000022870	TRUB1	89	93.930	ENSSTOG00000003641	TRUB1	90	95.000	Ictidomys_tridecemlineatus
ENSANAG00000022870	TRUB1	85	92.617	ENSJJAG00000011800	Trub1	88	92.617	Jaculus_jaculus
ENSANAG00000022870	TRUB1	72	65.759	ENSKMAG00000006232	trub1	92	65.759	Kryptolebias_marmoratus
ENSANAG00000022870	TRUB1	70	67.886	ENSLBEG00000026722	trub1	92	63.910	Labrus_bergylta
ENSANAG00000022870	TRUB1	79	73.188	ENSLACG00000014885	TRUB1	92	73.188	Latimeria_chalumnae
ENSANAG00000022870	TRUB1	78	70.330	ENSLOCG00000012979	trub1	93	70.330	Lepisosteus_oculatus
ENSANAG00000022870	TRUB1	100	79.330	ENSLAFG00000015452	TRUB1	100	80.168	Loxodonta_africana
ENSANAG00000022870	TRUB1	100	97.151	ENSMFAG00000031767	TRUB1	100	97.151	Macaca_fascicularis
ENSANAG00000022870	TRUB1	100	97.436	ENSMMUG00000001902	TRUB1	100	97.436	Macaca_mulatta
ENSANAG00000022870	TRUB1	100	93.162	ENSMNEG00000044646	TRUB1	96	93.750	Macaca_nemestrina
ENSANAG00000022870	TRUB1	100	97.151	ENSMLEG00000042655	TRUB1	100	97.151	Mandrillus_leucophaeus
ENSANAG00000022870	TRUB1	72	67.063	ENSMZEG00005024095	trub1	91	67.063	Maylandia_zebra
ENSANAG00000022870	TRUB1	77	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSANAG00000022870	TRUB1	85	85.859	ENSMAUG00000011101	Trub1	88	85.953	Mesocricetus_auratus
ENSANAG00000022870	TRUB1	99	93.983	ENSMICG00000016324	TRUB1	96	95.509	Microcebus_murinus
ENSANAG00000022870	TRUB1	91	83.642	ENSMOCG00000017759	Trub1	91	87.667	Microtus_ochrogaster
ENSANAG00000022870	TRUB1	81	83.451	ENSMODG00000009676	TRUB1	81	81.633	Monodelphis_domestica
ENSANAG00000022870	TRUB1	99	80.802	MGP_CAROLIEiJ_G0023100	Trub1	89	87.000	Mus_caroli
ENSANAG00000022870	TRUB1	99	79.656	ENSMUSG00000025086	Trub1	89	86.000	Mus_musculus
ENSANAG00000022870	TRUB1	99	81.375	MGP_PahariEiJ_G0014588	Trub1	89	87.333	Mus_pahari
ENSANAG00000022870	TRUB1	99	79.943	MGP_SPRETEiJ_G0024021	Trub1	89	86.333	Mus_spretus
ENSANAG00000022870	TRUB1	95	96.119	ENSMPUG00000003556	TRUB1	95	96.108	Mustela_putorius_furo
ENSANAG00000022870	TRUB1	95	89.254	ENSMLUG00000017686	TRUB1	100	86.040	Myotis_lucifugus
ENSANAG00000022870	TRUB1	99	86.246	ENSNGAG00000018682	Trub1	95	88.855	Nannospalax_galili
ENSANAG00000022870	TRUB1	70	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSANAG00000022870	TRUB1	100	96.581	ENSNLEG00000016345	TRUB1	100	96.581	Nomascus_leucogenys
ENSANAG00000022870	TRUB1	57	91.045	ENSMEUG00000006603	TRUB1	78	88.152	Notamacropus_eugenii
ENSANAG00000022870	TRUB1	85	86.000	ENSOPRG00000009371	TRUB1	87	86.000	Ochotona_princeps
ENSANAG00000022870	TRUB1	99	85.387	ENSODEG00000010854	TRUB1	96	86.228	Octodon_degus
ENSANAG00000022870	TRUB1	70	67.886	ENSONIG00000007249	trub1	89	67.886	Oreochromis_niloticus
ENSANAG00000022870	TRUB1	78	80.292	ENSOANG00000001556	TRUB1	93	78.092	Ornithorhynchus_anatinus
ENSANAG00000022870	TRUB1	85	89.000	ENSOCUG00000009456	TRUB1	95	87.273	Oryctolagus_cuniculus
ENSANAG00000022870	TRUB1	69	69.295	ENSORLG00000029719	trub1	86	69.295	Oryzias_latipes
ENSANAG00000022870	TRUB1	69	68.880	ENSORLG00020016767	trub1	85	68.880	Oryzias_latipes_hni
ENSANAG00000022870	TRUB1	69	68.880	ENSORLG00015014728	trub1	86	68.880	Oryzias_latipes_hsok
ENSANAG00000022870	TRUB1	74	66.409	ENSOMEG00000014556	trub1	90	66.537	Oryzias_melastigma
ENSANAG00000022870	TRUB1	99	94.842	ENSOGAG00000015895	TRUB1	95	96.407	Otolemur_garnettii
ENSANAG00000022870	TRUB1	84	94.352	ENSOARG00000015591	TRUB1	95	89.736	Ovis_aries
ENSANAG00000022870	TRUB1	100	96.581	ENSPPAG00000043645	TRUB1	100	96.581	Pan_paniscus
ENSANAG00000022870	TRUB1	95	93.433	ENSPPRG00000007096	TRUB1	96	93.413	Panthera_pardus
ENSANAG00000022870	TRUB1	95	93.731	ENSPTIG00000006378	TRUB1	96	93.713	Panthera_tigris_altaica
ENSANAG00000022870	TRUB1	100	96.581	ENSPTRG00000002964	TRUB1	100	96.581	Pan_troglodytes
ENSANAG00000022870	TRUB1	100	97.151	ENSPANG00000020712	TRUB1	100	97.151	Papio_anubis
ENSANAG00000022870	TRUB1	77	77.206	ENSPSIG00000012877	TRUB1	93	77.206	Pelodiscus_sinensis
ENSANAG00000022870	TRUB1	70	66.122	ENSPMGG00000000075	trub1	88	66.122	Periophthalmus_magnuspinnatus
ENSANAG00000022870	TRUB1	85	85.953	ENSPEMG00000011156	Trub1	88	85.953	Peromyscus_maniculatus_bairdii
ENSANAG00000022870	TRUB1	81	82.746	ENSPCIG00000009729	TRUB1	79	81.724	Phascolarctos_cinereus
ENSANAG00000022870	TRUB1	70	66.122	ENSPFOG00000009950	trub1	90	66.122	Poecilia_formosa
ENSANAG00000022870	TRUB1	70	66.122	ENSPLAG00000013855	trub1	86	66.122	Poecilia_latipinna
ENSANAG00000022870	TRUB1	70	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSANAG00000022870	TRUB1	70	66.939	ENSPREG00000003343	trub1	88	66.939	Poecilia_reticulata
ENSANAG00000022870	TRUB1	100	96.296	ENSPPYG00000002676	TRUB1	100	96.296	Pongo_abelii
ENSANAG00000022870	TRUB1	100	75.637	ENSPCAG00000008427	TRUB1	100	75.354	Procavia_capensis
ENSANAG00000022870	TRUB1	99	89.112	ENSPCOG00000024360	TRUB1	95	90.719	Propithecus_coquereli
ENSANAG00000022870	TRUB1	75	93.208	ENSPVAG00000007575	TRUB1	95	94.400	Pteropus_vampyrus
ENSANAG00000022870	TRUB1	72	67.063	ENSPNYG00000018614	trub1	91	67.063	Pundamilia_nyererei
ENSANAG00000022870	TRUB1	74	59.231	ENSPNAG00000006881	trub1	88	58.088	Pygocentrus_nattereri
ENSANAG00000022870	TRUB1	99	81.662	ENSRNOG00000017321	Trub1	88	87.333	Rattus_norvegicus
ENSANAG00000022870	TRUB1	100	87.179	ENSRBIG00000033423	TRUB1	96	87.798	Rhinopithecus_bieti
ENSANAG00000022870	TRUB1	100	96.866	ENSRROG00000033902	TRUB1	100	96.866	Rhinopithecus_roxellana
ENSANAG00000022870	TRUB1	100	98.291	ENSSBOG00000024237	TRUB1	100	98.291	Saimiri_boliviensis_boliviensis
ENSANAG00000022870	TRUB1	72	81.496	ENSSHAG00000009346	TRUB1	85	81.496	Sarcophilus_harrisii
ENSANAG00000022870	TRUB1	69	69.959	ENSSFOG00015022124	trub1	83	69.959	Scleropages_formosus
ENSANAG00000022870	TRUB1	70	68.699	ENSSMAG00000001020	trub1	88	68.699	Scophthalmus_maximus
ENSANAG00000022870	TRUB1	68	69.167	ENSSDUG00000016414	trub1	88	69.106	Seriola_dumerili
ENSANAG00000022870	TRUB1	68	69.583	ENSSLDG00000015486	trub1	88	69.512	Seriola_lalandi_dorsalis
ENSANAG00000022870	TRUB1	80	77.500	ENSSPUG00000001642	TRUB1	96	77.500	Sphenodon_punctatus
ENSANAG00000022870	TRUB1	74	66.923	ENSSPAG00000001217	trub1	92	66.923	Stegastes_partitus
ENSANAG00000022870	TRUB1	99	88.539	ENSSSCG00000010653	TRUB1	95	89.521	Sus_scrofa
ENSANAG00000022870	TRUB1	77	75.926	ENSTGUG00000010971	TRUB1	97	75.735	Taeniopygia_guttata
ENSANAG00000022870	TRUB1	72	77.381	ENSTBEG00000002880	TRUB1	99	77.381	Tupaia_belangeri
ENSANAG00000022870	TRUB1	72	92.032	ENSTTRG00000005767	TRUB1	95	90.800	Tursiops_truncatus
ENSANAG00000022870	TRUB1	95	95.522	ENSUAMG00000024876	TRUB1	95	95.509	Ursus_americanus
ENSANAG00000022870	TRUB1	84	97.619	ENSUMAG00000002411	TRUB1	95	91.018	Ursus_maritimus
ENSANAG00000022870	TRUB1	99	92.837	ENSVPAG00000005507	TRUB1	95	93.713	Vicugna_pacos
ENSANAG00000022870	TRUB1	99	92.264	ENSVVUG00000010085	TRUB1	80	94.012	Vulpes_vulpes
ENSANAG00000022870	TRUB1	77	66.176	ENSXETG00000023828	trub1	98	66.176	Xenopus_tropicalis
ENSANAG00000022870	TRUB1	69	65.021	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSANAG00000022870	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus