EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000023098 (Gene tree)
Gene ID: 105721604
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 76824 bases
Position: chrKZ203389.1:2537280-2614103
Accession: 105721604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000010726	ResIII	PF04851.15	7.8e-12	1	1
ENSANAP00000010735	ResIII	PF04851.15	7.9e-12	1	1
ENSANAP00000010742	ResIII	PF04851.15	8.1e-12	1	1
ENSANAP00000010742	DEAD	PF00270.29	2.3e-06	1	1
ENSANAP00000010735	DEAD	PF00270.29	2.4e-06	1	1
ENSANAP00000010726	DEAD	PF00270.29	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000028529	SMARCA1-201	3120	-	ENSANAP00000010726	1039 (aa)	-	A0A2K5CPV9
ENSANAT00000028545	SMARCA1-203	3084	-	ENSANAP00000010742	1027 (aa)	-	A0A2K5CPW8
ENSANAT00000028538	SMARCA1-202	3114	XM_021676469	ENSANAP00000010735	1037 (aa)	XP_021532144	A0A2K5CPX3

Gene Model

Click here to download ENSANAG00000023098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000023098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000023098	SMARCA1	93	80.283	ENSANAG00000019345	SMARCA5	99	80.283
ENSANAG00000023098	SMARCA1	51	48.400	ENSANAG00000034765	-	79	43.478
ENSANAG00000023098	SMARCA1	50	40.497	ENSANAG00000037548	CHD6	75	38.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000023098	SMARCA1	100	94.802	ENSG00000102038	SMARCA1	100	94.802	Homo_sapiens
ENSANAG00000023098	SMARCA1	92	78.893	ENSAPOG00000016035	smarca5	98	78.884	Acanthochromis_polyacanthus
ENSANAG00000023098	SMARCA1	100	91.963	ENSAMEG00000015218	SMARCA1	98	92.286	Ailuropoda_melanoleuca
ENSANAG00000023098	SMARCA1	85	78.848	ENSACIG00000016982	smarca5	99	78.906	Amphilophus_citrinellus
ENSANAG00000023098	SMARCA1	92	78.893	ENSAOCG00000015578	smarca5	95	78.024	Amphiprion_ocellaris
ENSANAG00000023098	SMARCA1	92	78.893	ENSAPEG00000011117	smarca5	99	78.538	Amphiprion_percula
ENSANAG00000023098	SMARCA1	93	78.513	ENSATEG00000012894	smarca5	95	77.879	Anabas_testudineus
ENSANAG00000023098	SMARCA1	93	88.086	ENSAPLG00000013149	SMARCA1	100	88.086	Anas_platyrhynchos
ENSANAG00000023098	SMARCA1	97	84.466	ENSACAG00000011376	SMARCA1	95	86.286	Anolis_carolinensis
ENSANAG00000023098	SMARCA1	96	76.447	ENSACLG00000025356	smarca5	95	78.182	Astatotilapia_calliptera
ENSANAG00000023098	SMARCA1	98	76.209	ENSAMXG00000005709	smarca5	94	79.179	Astyanax_mexicanus
ENSANAG00000023098	SMARCA1	87	83.011	ENSAMXG00000011227	smarca1	99	84.000	Astyanax_mexicanus
ENSANAG00000023098	SMARCA1	99	91.690	ENSBTAG00000002292	SMARCA1	98	92.039	Bos_taurus
ENSANAG00000023098	SMARCA1	93	59.394	WBGene00002169	isw-1	97	59.394	Caenorhabditis_elegans
ENSANAG00000023098	SMARCA1	100	94.579	ENSCJAG00000002868	SMARCA1	100	94.579	Callithrix_jacchus
ENSANAG00000023098	SMARCA1	100	84.851	ENSCAFG00000018673	SMARCA1	98	84.848	Canis_familiaris
ENSANAG00000023098	SMARCA1	100	93.573	ENSCAFG00020001751	SMARCA1	98	93.738	Canis_lupus_dingo
ENSANAG00000023098	SMARCA1	100	91.800	ENSCHIG00000009837	SMARCA1	98	92.315	Capra_hircus
ENSANAG00000023098	SMARCA1	97	91.275	ENSTSYG00000004240	SMARCA1	98	92.857	Carlito_syrichta
ENSANAG00000023098	SMARCA1	96	91.821	ENSCPOG00000013601	SMARCA1	95	91.940	Cavia_porcellus
ENSANAG00000023098	SMARCA1	100	93.655	ENSCCAG00000030817	SMARCA1	100	93.655	Cebus_capucinus
ENSANAG00000023098	SMARCA1	100	94.766	ENSCATG00000015921	SMARCA1	100	94.766	Cercocebus_atys
ENSANAG00000023098	SMARCA1	98	92.004	ENSCLAG00000002171	SMARCA1	98	92.004	Chinchilla_lanigera
ENSANAG00000023098	SMARCA1	100	94.707	ENSCSAG00000008460	SMARCA1	100	94.707	Chlorocebus_sabaeus
ENSANAG00000023098	SMARCA1	94	87.612	ENSCPBG00000001146	SMARCA1	94	87.688	Chrysemys_picta_bellii
ENSANAG00000023098	SMARCA1	91	68.987	ENSCING00000004110	swi/snf	97	68.987	Ciona_intestinalis
ENSANAG00000023098	SMARCA1	92	68.496	ENSCSAVG00000004620	-	100	69.042	Ciona_savignyi
ENSANAG00000023098	SMARCA1	100	94.707	ENSCANG00000007183	SMARCA1	100	94.707	Colobus_angolensis_palliatus
ENSANAG00000023098	SMARCA1	100	90.935	ENSCGRG00001010776	Smarca1	98	91.242	Cricetulus_griseus_chok1gshd
ENSANAG00000023098	SMARCA1	93	90.200	ENSCGRG00000015301	Smarca1	98	90.992	Cricetulus_griseus_crigri
ENSANAG00000023098	SMARCA1	92	78.996	ENSCSEG00000000328	smarca5	95	78.463	Cynoglossus_semilaevis
ENSANAG00000023098	SMARCA1	93	78.310	ENSCVAG00000008668	smarca5	99	78.092	Cyprinodon_variegatus
ENSANAG00000023098	SMARCA1	93	80.534	ENSDARG00000012776	smarca1	97	80.534	Danio_rerio
ENSANAG00000023098	SMARCA1	93	78.081	ENSDARG00000052348	smarca5	95	78.081	Danio_rerio
ENSANAG00000023098	SMARCA1	96	90.936	ENSDNOG00000004315	SMARCA1	98	90.936	Dasypus_novemcinctus
ENSANAG00000023098	SMARCA1	98	91.304	ENSDORG00000009270	Smarca1	97	91.232	Dipodomys_ordii
ENSANAG00000023098	SMARCA1	92	67.846	FBgn0011604	Iswi	98	68.150	Drosophila_melanogaster
ENSANAG00000023098	SMARCA1	76	93.750	ENSETEG00000017426	SMARCA1	85	93.750	Echinops_telfairi
ENSANAG00000023098	SMARCA1	92	76.098	ENSEBUG00000001239	smarca5	96	76.098	Eptatretus_burgeri
ENSANAG00000023098	SMARCA1	94	87.462	ENSEASG00005008218	SMARCA1	100	88.182	Equus_asinus_asinus
ENSANAG00000023098	SMARCA1	100	92.271	ENSECAG00000012106	SMARCA1	98	92.603	Equus_caballus
ENSANAG00000023098	SMARCA1	76	97.682	ENSEEUG00000014927	SMARCA1	83	97.682	Erinaceus_europaeus
ENSANAG00000023098	SMARCA1	94	81.655	ENSELUG00000010515	smarca1	98	81.655	Esox_lucius
ENSANAG00000023098	SMARCA1	98	93.449	ENSFCAG00000018496	SMARCA1	98	93.256	Felis_catus
ENSANAG00000023098	SMARCA1	86	87.842	ENSFALG00000000209	SMARCA1	98	87.939	Ficedula_albicollis
ENSANAG00000023098	SMARCA1	92	92.432	ENSFDAG00000009818	SMARCA1	97	92.510	Fukomys_damarensis
ENSANAG00000023098	SMARCA1	93	78.717	ENSFHEG00000007687	smarca5	94	78.081	Fundulus_heteroclitus
ENSANAG00000023098	SMARCA1	94	85.700	ENSGALG00000008431	SMARCA1	96	87.782	Gallus_gallus
ENSANAG00000023098	SMARCA1	93	78.819	ENSGAFG00000017731	smarca5	95	78.182	Gambusia_affinis
ENSANAG00000023098	SMARCA1	92	88.272	ENSGAGG00000023575	SMARCA1	100	88.272	Gopherus_agassizii
ENSANAG00000023098	SMARCA1	69	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSANAG00000023098	SMARCA1	98	91.908	ENSHGLG00000003080	SMARCA1	98	91.908	Heterocephalus_glaber_female
ENSANAG00000023098	SMARCA1	94	91.409	ENSHGLG00100001102	SMARCA1	100	91.409	Heterocephalus_glaber_male
ENSANAG00000023098	SMARCA1	92	78.732	ENSHCOG00000005458	smarca5	95	77.980	Hippocampus_comes
ENSANAG00000023098	SMARCA1	98	75.702	ENSIPUG00000005229	SMARCA5	97	77.992	Ictalurus_punctatus
ENSANAG00000023098	SMARCA1	95	80.297	ENSIPUG00000016905	Smarca1	99	81.920	Ictalurus_punctatus
ENSANAG00000023098	SMARCA1	98	93.256	ENSSTOG00000014524	SMARCA1	98	93.256	Ictidomys_tridecemlineatus
ENSANAG00000023098	SMARCA1	98	91.275	ENSJJAG00000002593	Smarca1	98	91.179	Jaculus_jaculus
ENSANAG00000023098	SMARCA1	92	79.039	ENSKMAG00000003777	smarca5	95	78.283	Kryptolebias_marmoratus
ENSANAG00000023098	SMARCA1	93	77.980	ENSLBEG00000018112	smarca5	95	77.980	Labrus_bergylta
ENSANAG00000023098	SMARCA1	88	78.947	ENSLBEG00000013295	SMARCA1	100	79.014	Labrus_bergylta
ENSANAG00000023098	SMARCA1	95	84.539	ENSLACG00000016697	SMARCA1	98	85.085	Latimeria_chalumnae
ENSANAG00000023098	SMARCA1	94	83.936	ENSLOCG00000014591	smarca1	97	83.936	Lepisosteus_oculatus
ENSANAG00000023098	SMARCA1	94	91.551	ENSLAFG00000000896	SMARCA1	99	91.542	Loxodonta_africana
ENSANAG00000023098	SMARCA1	100	94.802	ENSMFAG00000002117	SMARCA1	100	94.766	Macaca_fascicularis
ENSANAG00000023098	SMARCA1	100	94.766	ENSMMUG00000008818	SMARCA1	100	94.766	Macaca_mulatta
ENSANAG00000023098	SMARCA1	100	94.766	ENSMNEG00000041768	SMARCA1	100	94.766	Macaca_nemestrina
ENSANAG00000023098	SMARCA1	100	94.707	ENSMLEG00000043198	SMARCA1	100	94.707	Mandrillus_leucophaeus
ENSANAG00000023098	SMARCA1	93	78.819	ENSMAMG00000014294	smarca5	96	77.778	Mastacembelus_armatus
ENSANAG00000023098	SMARCA1	96	76.447	ENSMZEG00005009369	smarca5	95	78.182	Maylandia_zebra
ENSANAG00000023098	SMARCA1	95	86.207	ENSMGAG00000007042	SMARCA1	99	86.350	Meleagris_gallopavo
ENSANAG00000023098	SMARCA1	98	91.117	ENSMAUG00000008133	Smarca1	97	91.431	Mesocricetus_auratus
ENSANAG00000023098	SMARCA1	98	93.064	ENSMICG00000015768	SMARCA1	98	92.871	Microcebus_murinus
ENSANAG00000023098	SMARCA1	100	90.593	ENSMOCG00000009464	Smarca1	98	90.892	Microtus_ochrogaster
ENSANAG00000023098	SMARCA1	93	76.488	ENSMMOG00000005547	smarca5	99	76.488	Mola_mola
ENSANAG00000023098	SMARCA1	98	84.720	ENSMODG00000013187	-	99	84.705	Monodelphis_domestica
ENSANAG00000023098	SMARCA1	92	78.528	ENSMALG00000002081	smarca5	97	78.086	Monopterus_albus
ENSANAG00000023098	SMARCA1	100	90.781	MGP_CAROLIEiJ_G0033034	Smarca1	98	90.988	Mus_caroli
ENSANAG00000023098	SMARCA1	100	90.781	ENSMUSG00000031099	Smarca1	98	90.988	Mus_musculus
ENSANAG00000023098	SMARCA1	100	90.875	MGP_PahariEiJ_G0031579	Smarca1	98	90.988	Mus_pahari
ENSANAG00000023098	SMARCA1	100	90.875	MGP_SPRETEiJ_G0034192	Smarca1	98	91.083	Mus_spretus
ENSANAG00000023098	SMARCA1	100	93.084	ENSMPUG00000017423	SMARCA1	93	93.333	Mustela_putorius_furo
ENSANAG00000023098	SMARCA1	100	89.552	ENSMLUG00000029614	SMARCA1	100	88.993	Myotis_lucifugus
ENSANAG00000023098	SMARCA1	96	91.748	ENSNGAG00000006492	Smarca1	97	91.918	Nannospalax_galili
ENSANAG00000023098	SMARCA1	93	78.921	ENSNBRG00000004463	smarca5	99	78.283	Neolamprologus_brichardi
ENSANAG00000023098	SMARCA1	100	93.925	ENSNLEG00000015179	SMARCA1	100	93.925	Nomascus_leucogenys
ENSANAG00000023098	SMARCA1	89	76.786	ENSMEUG00000008819	SMARCA1	99	76.761	Notamacropus_eugenii
ENSANAG00000023098	SMARCA1	96	91.237	ENSODEG00000012163	SMARCA1	97	91.042	Octodon_degus
ENSANAG00000023098	SMARCA1	96	76.546	ENSONIG00000009993	smarca5	95	78.427	Oreochromis_niloticus
ENSANAG00000023098	SMARCA1	92	88.477	ENSOANG00000002862	SMARCA1	100	88.477	Ornithorhynchus_anatinus
ENSANAG00000023098	SMARCA1	98	90.490	ENSOCUG00000001047	SMARCA1	98	90.173	Oryctolagus_cuniculus
ENSANAG00000023098	SMARCA1	92	78.937	ENSORLG00000021998	smarca5	95	78.182	Oryzias_latipes
ENSANAG00000023098	SMARCA1	92	78.937	ENSORLG00020017679	smarca5	95	78.182	Oryzias_latipes_hni
ENSANAG00000023098	SMARCA1	92	78.937	ENSORLG00015017210	smarca5	95	78.081	Oryzias_latipes_hsok
ENSANAG00000023098	SMARCA1	92	78.937	ENSOMEG00000000086	smarca5	95	78.081	Oryzias_melastigma
ENSANAG00000023098	SMARCA1	96	93.087	ENSOGAG00000004399	SMARCA1	97	93.087	Otolemur_garnettii
ENSANAG00000023098	SMARCA1	94	92.103	ENSOARG00000014638	SMARCA1	100	93.469	Ovis_aries
ENSANAG00000023098	SMARCA1	100	94.802	ENSPPAG00000034647	SMARCA1	100	94.802	Pan_paniscus
ENSANAG00000023098	SMARCA1	98	93.545	ENSPPRG00000008929	SMARCA1	98	93.353	Panthera_pardus
ENSANAG00000023098	SMARCA1	94	92.892	ENSPTIG00000000915	SMARCA1	98	92.885	Panthera_tigris_altaica
ENSANAG00000023098	SMARCA1	100	94.802	ENSPTRG00000049876	SMARCA1	100	94.766	Pan_troglodytes
ENSANAG00000023098	SMARCA1	100	94.802	ENSPANG00000003871	SMARCA1	100	94.802	Papio_anubis
ENSANAG00000023098	SMARCA1	89	81.924	ENSPKIG00000013411	smarca1	98	81.828	Paramormyrops_kingsleyae
ENSANAG00000023098	SMARCA1	95	86.673	ENSPSIG00000010101	SMARCA1	100	87.963	Pelodiscus_sinensis
ENSANAG00000023098	SMARCA1	98	91.786	ENSPEMG00000017503	Smarca1	97	92.210	Peromyscus_maniculatus_bairdii
ENSANAG00000023098	SMARCA1	94	87.113	ENSPCIG00000015460	SMARCA1	98	87.187	Phascolarctos_cinereus
ENSANAG00000023098	SMARCA1	92	79.039	ENSPFOG00000007649	smarca5	95	78.182	Poecilia_formosa
ENSANAG00000023098	SMARCA1	92	79.039	ENSPLAG00000003363	smarca5	95	78.182	Poecilia_latipinna
ENSANAG00000023098	SMARCA1	92	78.937	ENSPMEG00000019849	smarca5	95	78.081	Poecilia_mexicana
ENSANAG00000023098	SMARCA1	92	78.937	ENSPREG00000023250	smarca5	95	78.081	Poecilia_reticulata
ENSANAG00000023098	SMARCA1	100	92.060	ENSPPYG00000020703	SMARCA1	100	92.060	Pongo_abelii
ENSANAG00000023098	SMARCA1	76	89.189	ENSPCOG00000020722	SMARCA1	94	88.640	Propithecus_coquereli
ENSANAG00000023098	SMARCA1	92	90.952	ENSPVAG00000003805	SMARCA1	94	90.347	Pteropus_vampyrus
ENSANAG00000023098	SMARCA1	55	80.274	ENSPNYG00000012299	smarca5	92	78.933	Pundamilia_nyererei
ENSANAG00000023098	SMARCA1	100	91.399	ENSRNOG00000003762	Smarca1	98	91.522	Rattus_norvegicus
ENSANAG00000023098	SMARCA1	100	94.707	ENSRROG00000034167	SMARCA1	100	94.707	Rhinopithecus_roxellana
ENSANAG00000023098	SMARCA1	96	93.127	ENSSBOG00000020641	SMARCA1	100	94.286	Saimiri_boliviensis_boliviensis
ENSANAG00000023098	SMARCA1	92	81.706	ENSSHAG00000013518	SMARCA1	99	81.501	Sarcophilus_harrisii
ENSANAG00000023098	SMARCA1	97	80.386	ENSSFOG00015009043	smarca1	98	82.565	Scleropages_formosus
ENSANAG00000023098	SMARCA1	95	77.468	ENSSFOG00015016794	smarca5	100	78.969	Scleropages_formosus
ENSANAG00000023098	SMARCA1	93	77.710	ENSSMAG00000004801	smarca5	95	77.710	Scophthalmus_maximus
ENSANAG00000023098	SMARCA1	93	78.411	ENSSDUG00000020690	smarca5	96	77.778	Seriola_dumerili
ENSANAG00000023098	SMARCA1	93	78.411	ENSSLDG00000025190	smarca5	96	77.778	Seriola_lalandi_dorsalis
ENSANAG00000023098	SMARCA1	86	83.670	ENSSARG00000000842	SMARCA1	91	83.670	Sorex_araneus
ENSANAG00000023098	SMARCA1	92	86.899	ENSSPUG00000000590	SMARCA1	94	86.872	Sphenodon_punctatus
ENSANAG00000023098	SMARCA1	93	78.513	ENSSPAG00000002894	smarca5	97	78.884	Stegastes_partitus
ENSANAG00000023098	SMARCA1	98	89.981	ENSSSCG00000012649	SMARCA1	98	92.141	Sus_scrofa
ENSANAG00000023098	SMARCA1	93	87.576	ENSTGUG00000003899	-	100	87.576	Taeniopygia_guttata
ENSANAG00000023098	SMARCA1	93	78.921	ENSTRUG00000014094	smarca5	95	78.283	Takifugu_rubripes
ENSANAG00000023098	SMARCA1	92	78.074	ENSTNIG00000017717	smarca5	94	77.172	Tetraodon_nigroviridis
ENSANAG00000023098	SMARCA1	92	85.743	ENSTBEG00000014973	SMARCA1	99	85.729	Tupaia_belangeri
ENSANAG00000023098	SMARCA1	92	89.725	ENSTTRG00000006168	SMARCA1	99	89.725	Tursiops_truncatus
ENSANAG00000023098	SMARCA1	100	93.100	ENSUAMG00000020201	SMARCA1	98	93.256	Ursus_americanus
ENSANAG00000023098	SMARCA1	94	89.219	ENSUMAG00000004073	SMARCA1	97	94.891	Ursus_maritimus
ENSANAG00000023098	SMARCA1	77	92.532	ENSVPAG00000010492	-	85	92.532	Vicugna_pacos
ENSANAG00000023098	SMARCA1	94	93.700	ENSVVUG00000008878	SMARCA1	99	93.694	Vulpes_vulpes
ENSANAG00000023098	SMARCA1	94	84.121	ENSXETG00000001526	smarca1	99	84.121	Xenopus_tropicalis
ENSANAG00000023098	SMARCA1	93	78.717	ENSXCOG00000011170	smarca5	98	78.081	Xiphophorus_couchianus
ENSANAG00000023098	SMARCA1	93	78.717	ENSXMAG00000009678	smarca5	97	79.934	Xiphophorus_maculatus