EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSANAG00000023456 (Gene tree)
Gene ID
105714381
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Aotus_nancymaae
Status
putative
Strand
Plus strand
Length
54724 bases
Position
chrKZ199789.1:2310309-2365032
Accession
105714381
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSANAP00000010991tRNA_anti-codonPF01336.257.2e-1211
ENSANAP00000010977tRNA_anti-codonPF01336.258e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSANAT00000028797RPA1-2024644-ENSANAP00000010991572 (aa)-A0A2K5CQL1
ENSANAT00000028783RPA1-2014737XM_012448339ENSANAP00000010977603 (aa)XP_012303762A0A2K5CQL3
Gene Model
Click here to download ENSANAG00000023456's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000023456's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSANAG00000023456RPA19864.372ENSAPOG00000011658rpa19965.419Acanthochromis_polyacanthus
ENSANAG00000023456RPA19859.789ENSAPOG00000019409RPA18959.917Acanthochromis_polyacanthus
ENSANAG00000023456RPA19988.704ENSAMEG00000007706RPA19788.704Ailuropoda_melanoleuca
ENSANAG00000023456RPA19759.022ENSACIG00000012881RPA19959.022Amphilophus_citrinellus
ENSANAG00000023456RPA19857.288ENSACIG00000007277rpa19957.288Amphilophus_citrinellus
ENSANAG00000023456RPA19856.349ENSAOCG00000009003RPA19756.825Amphiprion_ocellaris
ENSANAG00000023456RPA19864.587ENSAOCG00000023376rpa19965.241Amphiprion_ocellaris
ENSANAG00000023456RPA19861.783ENSAPEG00000019132RPA19755.659Amphiprion_percula
ENSANAG00000023456RPA19864.418ENSAPEG00000008634rpa19965.241Amphiprion_percula
ENSANAG00000023456RPA19866.051ENSATEG00000006443RPA19755.608Anabas_testudineus
ENSANAG00000023456RPA19765.256ENSATEG00000022024rpa19965.256Anabas_testudineus
ENSANAG00000023456RPA19964.697ENSAPLG00000012442RPA110064.697Anas_platyrhynchos
ENSANAG00000023456RPA19966.382ENSACAG00000014490RPA19766.382Anolis_carolinensis
ENSANAG00000023456RPA19858.937ENSACLG00000005223RPA19758.937Astatotilapia_calliptera
ENSANAG00000023456RPA19564.991ENSACLG00000006640rpa19964.991Astatotilapia_calliptera
ENSANAG00000023456RPA19764.388ENSAMXG00000008418rpa19964.388Astyanax_mexicanus
ENSANAG00000023456RPA110089.884ENSBTAG00000009711RPA19889.884Bos_taurus
ENSANAG00000023456RPA18231.013WBGene00017546rpa-17131.013Caenorhabditis_elegans
ENSANAG00000023456RPA110097.512ENSCJAG00000001848RPA19897.512Callithrix_jacchus
ENSANAG00000023456RPA110088.391ENSCAFG00000019249RPA19888.391Canis_familiaris
ENSANAG00000023456RPA110088.391ENSCAFG00020009847RPA19888.391Canis_lupus_dingo
ENSANAG00000023456RPA110090.547ENSCHIG00000026308RPA19890.547Capra_hircus
ENSANAG00000023456RPA110090.563ENSTSYG00000003482-9890.563Carlito_syrichta
ENSANAG00000023456RPA110088.391ENSCPOG00000000035RPA19888.391Cavia_porcellus
ENSANAG00000023456RPA110086.424ENSCCAG00000010981RPA19886.424Cebus_capucinus
ENSANAG00000023456RPA19989.018ENSCLAG00000005185-9889.018Chinchilla_lanigera
ENSANAG00000023456RPA110084.245ENSCLAG00000015045-9884.245Chinchilla_lanigera
ENSANAG00000023456RPA110082.285ENSCSAG00000013833RPA19882.285Chlorocebus_sabaeus
ENSANAG00000023456RPA17791.572ENSCHOG00000009454-10091.572Choloepus_hoffmanni
ENSANAG00000023456RPA19886.054ENSCHOG00000013540-10086.054Choloepus_hoffmanni
ENSANAG00000023456RPA19976.539ENSCPBG00000020377RPA19977.504Chrysemys_picta_bellii
ENSANAG00000023456RPA19842.857ENSCING00000023482-9642.857Ciona_intestinalis
ENSANAG00000023456RPA110095.105ENSCANG00000030911RPA19995.105Colobus_angolensis_palliatus
ENSANAG00000023456RPA19987.438ENSCGRG00001008197Rpa19887.438Cricetulus_griseus_chok1gshd
ENSANAG00000023456RPA18190.260ENSCGRG00000000582Rpa19986.391Cricetulus_griseus_crigri
ENSANAG00000023456RPA19861.577ENSCSEG00000013066rpa19761.577Cynoglossus_semilaevis
ENSANAG00000023456RPA19853.191ENSCSEG00000012726RPA19954.003Cynoglossus_semilaevis
ENSANAG00000023456RPA19863.406ENSCVAG00000019431rpa19965.225Cyprinodon_variegatus
ENSANAG00000023456RPA19458.811ENSCVAG00000013446-9358.811Cyprinodon_variegatus
ENSANAG00000023456RPA19864.587ENSDARG00000003938rpa19664.587Danio_rerio
ENSANAG00000023456RPA19989.185ENSDNOG00000017218RPA19889.185Dasypus_novemcinctus
ENSANAG00000023456RPA110089.718ENSDORG00000006199Rpa19889.718Dipodomys_ordii
ENSANAG00000023456RPA19843.718FBgn0010173RpA-709544.234Drosophila_melanogaster
ENSANAG00000023456RPA18283.541ENSETEG00000017608RPA18083.541Echinops_telfairi
ENSANAG00000023456RPA110091.434ENSEASG00005009372RPA110091.434Equus_asinus_asinus
ENSANAG00000023456RPA110090.547ENSECAG00000023886RPA19890.547Equus_caballus
ENSANAG00000023456RPA17389.762ENSEEUG00000002186-6889.762Erinaceus_europaeus
ENSANAG00000023456RPA19863.087ENSELUG00000021071rpa19663.255Esox_lucius
ENSANAG00000023456RPA19060.117ENSELUG00000006136RPA19960.425Esox_lucius
ENSANAG00000023456RPA110086.755ENSFCAG00000006306RPA19886.755Felis_catus
ENSANAG00000023456RPA110073.762ENSFALG00000006575RPA19873.762Ficedula_albicollis
ENSANAG00000023456RPA19989.018ENSFDAG00000007720RPA19889.018Fukomys_damarensis
ENSANAG00000023456RPA19862.818ENSFHEG00000003580rpa19662.818Fundulus_heteroclitus
ENSANAG00000023456RPA19863.393ENSGMOG00000010382rpa19663.393Gadus_morhua
ENSANAG00000023456RPA110073.675ENSGALG00000003072RPA19873.675Gallus_gallus
ENSANAG00000023456RPA19863.776ENSGAFG00000012916rpa19664.134Gambusia_affinis
ENSANAG00000023456RPA19855.399ENSGAFG00000020953RPA19754.930Gambusia_affinis
ENSANAG00000023456RPA19960.697ENSGACG00000010856rpa19860.697Gasterosteus_aculeatus
ENSANAG00000023456RPA19976.539ENSGAGG00000013611RPA19776.539Gopherus_agassizii
ENSANAG00000023456RPA110095.629ENSGGOG00000014186RPA19895.629Gorilla_gorilla
ENSANAG00000023456RPA19864.081ENSHBUG00000017773rpa19664.081Haplochromis_burtoni
ENSANAG00000023456RPA19855.979ENSHBUG00000009348RPA19955.979Haplochromis_burtoni
ENSANAG00000023456RPA19989.018ENSHGLG00000008846RPA19889.018Heterocephalus_glaber_female
ENSANAG00000023456RPA110075.788ENSHGLG00100002005-9875.788Heterocephalus_glaber_male
ENSANAG00000023456RPA19989.018ENSHGLG00100017755-9889.018Heterocephalus_glaber_male
ENSANAG00000023456RPA110084.411ENSHGLG00100000799-9884.411Heterocephalus_glaber_male
ENSANAG00000023456RPA19947.368ENSHCOG00000000351RPA19647.368Hippocampus_comes
ENSANAG00000023456RPA19861.655ENSHCOG00000001401rpa19662.162Hippocampus_comes
ENSANAG00000023456RPA19863.193ENSIPUG00000004400rpa19663.193Ictalurus_punctatus
ENSANAG00000023456RPA19981.848ENSSTOG00000022475RPA19881.848Ictidomys_tridecemlineatus
ENSANAG00000023456RPA19889.796ENSJJAG00000000876Rpa19889.796Jaculus_jaculus
ENSANAG00000023456RPA19856.143ENSKMAG00000000234RPA19656.143Kryptolebias_marmoratus
ENSANAG00000023456RPA19861.977ENSKMAG00000005605rpa19662.732Kryptolebias_marmoratus
ENSANAG00000023456RPA19863.039ENSLBEG00000002281RPA18859.834Labrus_bergylta
ENSANAG00000023456RPA19864.171ENSLBEG00000021604rpa19664.171Labrus_bergylta
ENSANAG00000023456RPA18268.842ENSLACG00000007210RPA19967.400Latimeria_chalumnae
ENSANAG00000023456RPA19868.581ENSLOCG00000006397rpa19668.581Lepisosteus_oculatus
ENSANAG00000023456RPA19987.705ENSLAFG00000015354RPA19887.705Loxodonta_africana
ENSANAG00000023456RPA18493.651ENSMFAG00000036138-9993.651Macaca_fascicularis
ENSANAG00000023456RPA110094.362ENSMMUG00000011604-9994.362Macaca_mulatta
ENSANAG00000023456RPA110087.086ENSMMUG00000002442-9887.086Macaca_mulatta
ENSANAG00000023456RPA110083.275ENSMNEG00000029837-9890.063Macaca_nemestrina
ENSANAG00000023456RPA19893.729ENSMNEG00000031632-9893.729Macaca_nemestrina
ENSANAG00000023456RPA110088.303ENSMLEG00000038768-10088.303Mandrillus_leucophaeus
ENSANAG00000023456RPA19763.194ENSMAMG00000020097RPA19753.221Mastacembelus_armatus
ENSANAG00000023456RPA19864.081ENSMAMG00000017993rpa19965.938Mastacembelus_armatus
ENSANAG00000023456RPA19864.081ENSMZEG00005007551rpa19961.340Maylandia_zebra
ENSANAG00000023456RPA19858.937ENSMZEG00005024731RPA19758.937Maylandia_zebra
ENSANAG00000023456RPA110073.510ENSMGAG00000005315RPA19873.510Meleagris_gallopavo
ENSANAG00000023456RPA19988.833ENSMAUG00000010474Rpa19989.185Mesocricetus_auratus
ENSANAG00000023456RPA110091.211ENSMICG00000012867RPA19891.211Microcebus_murinus
ENSANAG00000023456RPA19987.667ENSMOCG00000013019Rpa19887.667Microtus_ochrogaster
ENSANAG00000023456RPA19858.854ENSMMOG00000010868RPA19658.854Mola_mola
ENSANAG00000023456RPA19863.167ENSMMOG00000014292rpa19963.167Mola_mola
ENSANAG00000023456RPA19983.721ENSMODG00000010549RPA19783.721Monodelphis_domestica
ENSANAG00000023456RPA19864.020ENSMALG00000011453rpa19664.189Monopterus_albus
ENSANAG00000023456RPA19859.660ENSMALG00000001208RPA18658.367Monopterus_albus
ENSANAG00000023456RPA19986.733MGP_CAROLIEiJ_G0016734Rpa19886.733Mus_caroli
ENSANAG00000023456RPA19985.057ENSMUSG00000000751Rpa19885.057Mus_musculus
ENSANAG00000023456RPA19987.624MGP_PahariEiJ_G0017871Rpa19887.624Mus_pahari
ENSANAG00000023456RPA19985.082MGP_SPRETEiJ_G0017577Rpa19885.082Mus_spretus
ENSANAG00000023456RPA110087.396ENSMPUG00000013119RPA19887.396Mustela_putorius_furo
ENSANAG00000023456RPA19987.167ENSMLUG00000006113RPA19787.167Myotis_lucifugus
ENSANAG00000023456RPA19887.946ENSNGAG00000004522Rpa19487.946Nannospalax_galili
ENSANAG00000023456RPA19664.769ENSNBRG00000020595rpa19964.769Neolamprologus_brichardi
ENSANAG00000023456RPA19857.414ENSNBRG00000009672RPA19557.414Neolamprologus_brichardi
ENSANAG00000023456RPA110093.698ENSNLEG00000017149RPA19894.205Nomascus_leucogenys
ENSANAG00000023456RPA110073.300ENSMEUG00000006714RPA19973.300Notamacropus_eugenii
ENSANAG00000023456RPA19886.935ENSODEG00000009038RPA19686.935Octodon_degus
ENSANAG00000023456RPA19864.214ENSONIG00000013135rpa19664.214Oreochromis_niloticus
ENSANAG00000023456RPA19981.260ENSOANG00000010880RPA19981.426Ornithorhynchus_anatinus
ENSANAG00000023456RPA110085.150ENSOCUG00000001504RPA19885.150Oryctolagus_cuniculus
ENSANAG00000023456RPA19864.358ENSORLG00000004856rpa19664.358Oryzias_latipes
ENSANAG00000023456RPA19863.927ENSORLG00000003368RPA19754.075Oryzias_latipes
ENSANAG00000023456RPA19861.438ENSORLG00020015284RPA19752.705Oryzias_latipes_hni
ENSANAG00000023456RPA19864.527ENSORLG00020008980rpa19664.527Oryzias_latipes_hni
ENSANAG00000023456RPA17660.185ENSORLG00015005867-9860.000Oryzias_latipes_hsok
ENSANAG00000023456RPA19864.527ENSORLG00015013982rpa19664.527Oryzias_latipes_hsok
ENSANAG00000023456RPA19854.299ENSORLG00015020383RPA19754.299Oryzias_latipes_hsok
ENSANAG00000023456RPA19756.873ENSOMEG00000011040RPA19957.368Oryzias_melastigma
ENSANAG00000023456RPA19862.395ENSOMEG00000004704rpa19960.211Oryzias_melastigma
ENSANAG00000023456RPA19486.029ENSOGAG00000029379-9786.029Otolemur_garnettii
ENSANAG00000023456RPA110089.718ENSOGAG00000005581-9889.718Otolemur_garnettii
ENSANAG00000023456RPA110090.547ENSOARG00000014479RPA19890.547Ovis_aries
ENSANAG00000023456RPA110094.362ENSPPAG00000039680RPA19894.868Pan_paniscus
ENSANAG00000023456RPA110087.086ENSPPRG00000011807RPA19887.086Panthera_pardus
ENSANAG00000023456RPA110086.755ENSPTIG00000007898RPA19886.755Panthera_tigris_altaica
ENSANAG00000023456RPA110094.362ENSPTRG00000008539RPA19894.868Pan_troglodytes
ENSANAG00000023456RPA110094.527ENSPANG00000024592RPA19894.527Papio_anubis
ENSANAG00000023456RPA19364.171ENSPKIG00000008053rpa19164.349Paramormyrops_kingsleyae
ENSANAG00000023456RPA19976.461ENSPSIG00000015617RPA19976.461Pelodiscus_sinensis
ENSANAG00000023456RPA19765.536ENSPMGG00000011589rpa19865.714Periophthalmus_magnuspinnatus
ENSANAG00000023456RPA19558.029ENSPMGG00000000543RPA19956.703Periophthalmus_magnuspinnatus
ENSANAG00000023456RPA19988.333ENSPEMG00000021061Rpa19888.333Peromyscus_maniculatus_bairdii
ENSANAG00000023456RPA110082.450ENSPCIG00000019049RPA19782.947Phascolarctos_cinereus
ENSANAG00000023456RPA19864.516ENSPFOG00000003987rpa19664.516Poecilia_formosa
ENSANAG00000023456RPA19355.426ENSPLAG00000008844-9455.426Poecilia_latipinna
ENSANAG00000023456RPA19864.346ENSPLAG00000004984rpa19664.346Poecilia_latipinna
ENSANAG00000023456RPA19864.516ENSPMEG00000020602rpa19963.929Poecilia_mexicana
ENSANAG00000023456RPA19355.760ENSPMEG00000003627-9355.259Poecilia_mexicana
ENSANAG00000023456RPA19762.609ENSPREG00000010119RPA19753.963Poecilia_reticulata
ENSANAG00000023456RPA19357.754ENSPREG00000010174rpa19556.655Poecilia_reticulata
ENSANAG00000023456RPA110091.542ENSPCOG00000001799RPA19891.542Propithecus_coquereli
ENSANAG00000023456RPA19989.684ENSPVAG00000002149RPA19889.684Pteropus_vampyrus
ENSANAG00000023456RPA19864.250ENSPNYG00000016316rpa19964.937Pundamilia_nyererei
ENSANAG00000023456RPA19858.615ENSPNYG00000024165RPA19758.615Pundamilia_nyererei
ENSANAG00000023456RPA19855.892ENSPNAG00000008599rpa19656.971Pygocentrus_nattereri
ENSANAG00000023456RPA19988.167ENSRNOG00000003123Rpa19888.167Rattus_norvegicus
ENSANAG00000023456RPA110093.543ENSRBIG00000036587RPA19893.543Rhinopithecus_bieti
ENSANAG00000023456RPA110087.748ENSRROG00000043278RPA19887.748Rhinopithecus_roxellana
ENSANAG00000023456RPA19932.184YAR007CRFA19632.184Saccharomyces_cerevisiae
ENSANAG00000023456RPA110092.869ENSSBOG00000030233RPA19992.869Saimiri_boliviensis_boliviensis
ENSANAG00000023456RPA19983.444ENSSHAG00000007969RPA19783.775Sarcophilus_harrisii
ENSANAG00000023456RPA19866.044ENSSFOG00015005362rpa18866.044Scleropages_formosus
ENSANAG00000023456RPA19464.027ENSSMAG00000019746RPA19752.804Scophthalmus_maximus
ENSANAG00000023456RPA19465.820ENSSDUG00000016358RPA19754.160Seriola_dumerili
ENSANAG00000023456RPA19767.145ENSSDUG00000011949rpa19667.145Seriola_dumerili
ENSANAG00000023456RPA19465.438ENSSLDG00000020784RPA19753.904Seriola_lalandi_dorsalis
ENSANAG00000023456RPA19767.145ENSSLDG00000011806rpa19667.145Seriola_lalandi_dorsalis
ENSANAG00000023456RPA18985.294ENSSARG00000007506RPA18985.294Sorex_araneus
ENSANAG00000023456RPA19972.987ENSSPUG00000007223RPA19972.987Sphenodon_punctatus
ENSANAG00000023456RPA19860.000ENSSPAG00000011165RPA19759.511Stegastes_partitus
ENSANAG00000023456RPA19864.587ENSSPAG00000009903rpa19664.587Stegastes_partitus
ENSANAG00000023456RPA110090.734ENSSSCG00000017822RPA110089.718Sus_scrofa
ENSANAG00000023456RPA110073.179ENSTGUG00000005775RPA19873.179Taeniopygia_guttata
ENSANAG00000023456RPA19863.084ENSTRUG00000000405RPA18362.557Takifugu_rubripes
ENSANAG00000023456RPA19864.187ENSTRUG00000003616rpa19664.187Takifugu_rubripes
ENSANAG00000023456RPA19865.159ENSTNIG00000016199rpa19665.159Tetraodon_nigroviridis
ENSANAG00000023456RPA18497.561ENSTBEG00000002709RPA18197.561Tupaia_belangeri
ENSANAG00000023456RPA19987.874ENSTTRG00000001169RPA19887.874Tursiops_truncatus
ENSANAG00000023456RPA19092.308ENSUAMG00000015676RPA19792.308Ursus_americanus
ENSANAG00000023456RPA110090.035ENSUMAG00000009328RPA19890.035Ursus_maritimus
ENSANAG00000023456RPA110087.728ENSVPAG00000009443RPA19887.728Vicugna_pacos
ENSANAG00000023456RPA110088.557ENSVVUG00000021715RPA19888.557Vulpes_vulpes
ENSANAG00000023456RPA19974.247ENSXETG00000013538rpa19774.667Xenopus_tropicalis
ENSANAG00000023456RPA19758.633ENSXCOG00000009899-9958.633Xiphophorus_couchianus
ENSANAG00000023456RPA19362.321ENSXCOG00000010068rpa19462.342Xiphophorus_couchianus
ENSANAG00000023456RPA19862.988ENSXMAG00000004102rpa19963.556Xiphophorus_maculatus
ENSANAG00000023456RPA19861.684ENSXMAG00000010333RPA19261.684Xiphophorus_maculatus

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