EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000023565 (Gene tree)
Gene ID: 105734243
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 366380 bases
Position: chrKZ205424.1:7264937-7631316
Accession: 105734243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000011218	CMS1	PF14617.6	7.9e-31	1	1
ENSANAP00000011216	CMS1	PF14617.6	1.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000029026	CMSS1-202	843	XM_012477019	ENSANAP00000011218	280 (aa)	XP_012332442	A0A2K5CRA4
ENSANAT00000029024	CMSS1-201	2542	XM_012477028	ENSANAP00000011216	262 (aa)	XP_012332451	A0A2K5CR95

Gene Model

Click here to download ENSANAG00000023565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000023565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000023565	CMSS1	100	92.857	ENSG00000184220	CMSS1	99	95.062	Homo_sapiens
ENSANAG00000023565	CMSS1	77	63.366	ENSAPOG00000010604	cmss1	82	63.366	Acanthochromis_polyacanthus
ENSANAG00000023565	CMSS1	99	88.846	ENSAMEG00000004092	CMSS1	100	88.846	Ailuropoda_melanoleuca
ENSANAG00000023565	CMSS1	77	52.970	ENSACIG00000021854	cmss1	91	49.174	Amphilophus_citrinellus
ENSANAG00000023565	CMSS1	100	52.595	ENSAOCG00000013361	cmss1	100	51.903	Amphiprion_ocellaris
ENSANAG00000023565	CMSS1	100	51.724	ENSAPEG00000005829	cmss1	100	51.827	Amphiprion_percula
ENSANAG00000023565	CMSS1	100	50.825	ENSATEG00000008209	cmss1	100	52.901	Anabas_testudineus
ENSANAG00000023565	CMSS1	87	67.826	ENSAPLG00000010542	CMSS1	100	67.826	Anas_platyrhynchos
ENSANAG00000023565	CMSS1	99	61.567	ENSACAG00000011065	CMSS1	98	61.567	Anolis_carolinensis
ENSANAG00000023565	CMSS1	100	48.454	ENSACLG00000027294	cmss1	100	49.141	Astatotilapia_calliptera
ENSANAG00000023565	CMSS1	100	44.816	ENSAMXG00000002046	cmss1	100	45.151	Astyanax_mexicanus
ENSANAG00000023565	CMSS1	100	85.000	ENSBTAG00000013663	CMSS1	100	86.786	Bos_taurus
ENSANAG00000023565	CMSS1	100	95.420	ENSCJAG00000000610	CMSS1	100	95.420	Callithrix_jacchus
ENSANAG00000023565	CMSS1	100	90.458	ENSCAFG00000009230	CMSS1	95	90.458	Canis_familiaris
ENSANAG00000023565	CMSS1	98	90.698	ENSCAFG00020009464	-	95	90.385	Canis_lupus_dingo
ENSANAG00000023565	CMSS1	88	84.052	ENSCAFG00020024156	-	76	80.408	Canis_lupus_dingo
ENSANAG00000023565	CMSS1	100	87.023	ENSCHIG00000013003	CMSS1	95	87.023	Capra_hircus
ENSANAG00000023565	CMSS1	100	88.168	ENSTSYG00000009266	CMSS1	99	88.803	Carlito_syrichta
ENSANAG00000023565	CMSS1	85	75.000	ENSCAPG00000013584	CMSS1	100	71.179	Cavia_aperea
ENSANAG00000023565	CMSS1	100	86.071	ENSCPOG00000014680	CMSS1	100	86.071	Cavia_porcellus
ENSANAG00000023565	CMSS1	100	97.143	ENSCCAG00000034685	CMSS1	100	97.143	Cebus_capucinus
ENSANAG00000023565	CMSS1	100	93.893	ENSCATG00000031980	CMSS1	100	93.893	Cercocebus_atys
ENSANAG00000023565	CMSS1	87	93.013	ENSCLAG00000011241	CMSS1	98	93.013	Chinchilla_lanigera
ENSANAG00000023565	CMSS1	94	94.694	ENSCSAG00000006024	CMSS1	100	94.694	Chlorocebus_sabaeus
ENSANAG00000023565	CMSS1	100	68.214	ENSCHOG00000012098	CMSS1	100	68.214	Choloepus_hoffmanni
ENSANAG00000023565	CMSS1	71	41.361	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSANAG00000023565	CMSS1	100	93.214	ENSCANG00000031337	CMSS1	100	93.214	Colobus_angolensis_palliatus
ENSANAG00000023565	CMSS1	100	80.714	ENSCGRG00001014305	Cmss1	100	80.714	Cricetulus_griseus_chok1gshd
ENSANAG00000023565	CMSS1	97	81.569	ENSCGRG00000006722	Cmss1	99	81.569	Cricetulus_griseus_crigri
ENSANAG00000023565	CMSS1	100	48.822	ENSCSEG00000004958	cmss1	100	49.836	Cynoglossus_semilaevis
ENSANAG00000023565	CMSS1	100	52.921	ENSCVAG00000005039	cmss1	100	52.921	Cyprinodon_variegatus
ENSANAG00000023565	CMSS1	100	45.847	ENSDARG00000112579	cmss1	100	44.951	Danio_rerio
ENSANAG00000023565	CMSS1	100	85.496	ENSDNOG00000040418	CMSS1	93	85.496	Dasypus_novemcinctus
ENSANAG00000023565	CMSS1	100	86.071	ENSDORG00000010461	Cmss1	100	86.071	Dipodomys_ordii
ENSANAG00000023565	CMSS1	50	50.758	ENSEBUG00000002156	-	96	50.758	Eptatretus_burgeri
ENSANAG00000023565	CMSS1	99	83.142	ENSEASG00005010966	CMSS1	99	91.324	Equus_asinus_asinus
ENSANAG00000023565	CMSS1	99	88.462	ENSECAG00000015662	CMSS1	99	90.708	Equus_caballus
ENSANAG00000023565	CMSS1	100	55.357	ENSEEUG00000007624	-	100	55.357	Erinaceus_europaeus
ENSANAG00000023565	CMSS1	100	47.896	ENSELUG00000019459	cmss1	100	50.667	Esox_lucius
ENSANAG00000023565	CMSS1	100	91.786	ENSFCAG00000044577	CMSS1	100	91.786	Felis_catus
ENSANAG00000023565	CMSS1	90	64.557	ENSFALG00000005816	CMSS1	100	64.557	Ficedula_albicollis
ENSANAG00000023565	CMSS1	87	90.351	ENSFDAG00000012577	CMSS1	100	90.351	Fukomys_damarensis
ENSANAG00000023565	CMSS1	87	58.874	ENSFHEG00000012008	cmss1	95	58.874	Fundulus_heteroclitus
ENSANAG00000023565	CMSS1	99	49.648	ENSGMOG00000016729	cmss1	100	49.826	Gadus_morhua
ENSANAG00000023565	CMSS1	100	62.879	ENSGALG00000015267	CMSS1	100	62.879	Gallus_gallus
ENSANAG00000023565	CMSS1	79	62.319	ENSGAFG00000021217	cmss1	77	62.376	Gambusia_affinis
ENSANAG00000023565	CMSS1	99	46.996	ENSGACG00000002798	cmss1	100	47.857	Gasterosteus_aculeatus
ENSANAG00000023565	CMSS1	90	70.464	ENSGAGG00000019861	CMSS1	92	70.464	Gopherus_agassizii
ENSANAG00000023565	CMSS1	100	93.511	ENSGGOG00000014125	CMSS1	100	93.511	Gorilla_gorilla
ENSANAG00000023565	CMSS1	100	47.619	ENSHBUG00000008431	cmss1	100	49.655	Haplochromis_burtoni
ENSANAG00000023565	CMSS1	97	83.858	ENSHGLG00000019481	CMSS1	100	83.858	Heterocephalus_glaber_female
ENSANAG00000023565	CMSS1	98	83.721	ENSHGLG00100010314	CMSS1	100	83.721	Heterocephalus_glaber_male
ENSANAG00000023565	CMSS1	100	52.703	ENSHCOG00000003222	cmss1	100	53.898	Hippocampus_comes
ENSANAG00000023565	CMSS1	100	46.959	ENSIPUG00000011591	cmss1	100	47.260	Ictalurus_punctatus
ENSANAG00000023565	CMSS1	100	88.571	ENSSTOG00000019366	CMSS1	100	88.571	Ictidomys_tridecemlineatus
ENSANAG00000023565	CMSS1	100	82.500	ENSJJAG00000014894	Cmss1	100	82.500	Jaculus_jaculus
ENSANAG00000023565	CMSS1	77	52.970	ENSKMAG00000002390	cmss1	81	52.970	Kryptolebias_marmoratus
ENSANAG00000023565	CMSS1	84	52.500	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSANAG00000023565	CMSS1	87	63.478	ENSLACG00000009293	CMSS1	100	63.478	Latimeria_chalumnae
ENSANAG00000023565	CMSS1	100	50.177	ENSLOCG00000009391	cmss1	100	51.237	Lepisosteus_oculatus
ENSANAG00000023565	CMSS1	87	89.474	ENSLAFG00000017509	CMSS1	100	89.474	Loxodonta_africana
ENSANAG00000023565	CMSS1	100	94.286	ENSMFAG00000045006	CMSS1	100	94.286	Macaca_fascicularis
ENSANAG00000023565	CMSS1	100	93.929	ENSMMUG00000002939	CMSS1	100	93.929	Macaca_mulatta
ENSANAG00000023565	CMSS1	100	93.929	ENSMNEG00000031315	CMSS1	100	93.929	Macaca_nemestrina
ENSANAG00000023565	CMSS1	100	93.929	ENSMLEG00000033660	CMSS1	100	93.929	Mandrillus_leucophaeus
ENSANAG00000023565	CMSS1	100	50.671	ENSMAMG00000017176	cmss1	100	52.041	Mastacembelus_armatus
ENSANAG00000023565	CMSS1	100	48.454	ENSMZEG00005021886	cmss1	100	49.141	Maylandia_zebra
ENSANAG00000023565	CMSS1	87	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSANAG00000023565	CMSS1	100	58.214	ENSMAUG00000020609	Cmss1	100	58.571	Mesocricetus_auratus
ENSANAG00000023565	CMSS1	100	90.714	ENSMICG00000048977	CMSS1	100	90.714	Microcebus_murinus
ENSANAG00000023565	CMSS1	100	79.643	ENSMOCG00000021937	Cmss1	100	79.643	Microtus_ochrogaster
ENSANAG00000023565	CMSS1	77	61.386	ENSMMOG00000019794	cmss1	97	55.462	Mola_mola
ENSANAG00000023565	CMSS1	98	73.846	ENSMODG00000002275	CMSS1	98	72.901	Monodelphis_domestica
ENSANAG00000023565	CMSS1	100	51.195	ENSMALG00000004250	cmss1	100	51.203	Monopterus_albus
ENSANAG00000023565	CMSS1	100	79.715	MGP_CAROLIEiJ_G0020824	Cmss1	100	79.715	Mus_caroli
ENSANAG00000023565	CMSS1	100	80.427	ENSMUSG00000022748	Cmss1	100	80.427	Mus_musculus
ENSANAG00000023565	CMSS1	100	79.004	MGP_PahariEiJ_G0016524	Cmss1	100	79.004	Mus_pahari
ENSANAG00000023565	CMSS1	100	79.715	MGP_SPRETEiJ_G0021724	Cmss1	100	79.715	Mus_spretus
ENSANAG00000023565	CMSS1	99	91.188	ENSMPUG00000011324	CMSS1	100	91.954	Mustela_putorius_furo
ENSANAG00000023565	CMSS1	99	89.695	ENSMLUG00000001131	CMSS1	99	90.038	Myotis_lucifugus
ENSANAG00000023565	CMSS1	99	84.942	ENSNGAG00000020316	Cmss1	100	83.571	Nannospalax_galili
ENSANAG00000023565	CMSS1	100	48.475	ENSNBRG00000003095	cmss1	100	49.141	Neolamprologus_brichardi
ENSANAG00000023565	CMSS1	100	94.643	ENSNLEG00000034172	CMSS1	100	94.643	Nomascus_leucogenys
ENSANAG00000023565	CMSS1	87	66.228	ENSMEUG00000014505	CMSS1	100	66.228	Notamacropus_eugenii
ENSANAG00000023565	CMSS1	100	90.000	ENSOPRG00000002986	CMSS1	100	90.000	Ochotona_princeps
ENSANAG00000023565	CMSS1	100	68.929	ENSODEG00000009446	-	100	68.929	Octodon_degus
ENSANAG00000023565	CMSS1	100	84.643	ENSODEG00000005226	-	100	84.643	Octodon_degus
ENSANAG00000023565	CMSS1	100	73.929	ENSODEG00000001853	-	100	73.929	Octodon_degus
ENSANAG00000023565	CMSS1	100	79.787	ENSODEG00000003558	-	100	79.787	Octodon_degus
ENSANAG00000023565	CMSS1	77	59.901	ENSONIG00000006678	cmss1	93	53.719	Oreochromis_niloticus
ENSANAG00000023565	CMSS1	98	71.154	ENSOANG00000007529	CMSS1	100	73.391	Ornithorhynchus_anatinus
ENSANAG00000023565	CMSS1	100	90.076	ENSOCUG00000025366	CMSS1	95	90.076	Oryctolagus_cuniculus
ENSANAG00000023565	CMSS1	100	50.685	ENSORLG00000020340	cmss1	100	50.685	Oryzias_latipes
ENSANAG00000023565	CMSS1	87	54.585	ENSORLG00020012235	cmss1	98	54.348	Oryzias_latipes_hni
ENSANAG00000023565	CMSS1	77	56.436	ENSORLG00015015551	cmss1	75	56.436	Oryzias_latipes_hsok
ENSANAG00000023565	CMSS1	100	52.881	ENSOMEG00000012555	cmss1	100	53.633	Oryzias_melastigma
ENSANAG00000023565	CMSS1	87	91.667	ENSOGAG00000002045	CMSS1	100	91.667	Otolemur_garnettii
ENSANAG00000023565	CMSS1	99	87.405	ENSOARG00000017899	CMSS1	90	87.405	Ovis_aries
ENSANAG00000023565	CMSS1	100	93.130	ENSPPAG00000038515	CMSS1	95	93.822	Pan_paniscus
ENSANAG00000023565	CMSS1	100	91.429	ENSPPRG00000016767	CMSS1	100	91.429	Panthera_pardus
ENSANAG00000023565	CMSS1	100	91.071	ENSPTIG00000018274	CMSS1	100	91.071	Panthera_tigris_altaica
ENSANAG00000023565	CMSS1	100	93.214	ENSPTRG00000015157	CMSS1	100	93.878	Pan_troglodytes
ENSANAG00000023565	CMSS1	100	90.076	ENSPANG00000019980	CMSS1	99	90.734	Papio_anubis
ENSANAG00000023565	CMSS1	86	60.000	ENSPKIG00000012609	cmss1	97	55.212	Paramormyrops_kingsleyae
ENSANAG00000023565	CMSS1	87	72.052	ENSPSIG00000003849	CMSS1	100	72.052	Pelodiscus_sinensis
ENSANAG00000023565	CMSS1	84	56.637	ENSPMGG00000010286	cmss1	87	60.099	Periophthalmus_magnuspinnatus
ENSANAG00000023565	CMSS1	100	80.427	ENSPEMG00000016384	Cmss1	100	80.427	Peromyscus_maniculatus_bairdii
ENSANAG00000023565	CMSS1	78	53.431	ENSPMAG00000001146	cmss1	99	53.960	Petromyzon_marinus
ENSANAG00000023565	CMSS1	99	74.427	ENSPCIG00000015656	CMSS1	99	74.144	Phascolarctos_cinereus
ENSANAG00000023565	CMSS1	100	52.448	ENSPFOG00000016849	cmss1	100	52.448	Poecilia_formosa
ENSANAG00000023565	CMSS1	100	52.098	ENSPLAG00000008323	cmss1	100	52.098	Poecilia_latipinna
ENSANAG00000023565	CMSS1	100	49.342	ENSPMEG00000021020	cmss1	100	52.431	Poecilia_mexicana
ENSANAG00000023565	CMSS1	94	57.028	ENSPREG00000007618	cmss1	84	57.028	Poecilia_reticulata
ENSANAG00000023565	CMSS1	100	92.500	ENSPPYG00000013606	CMSS1	100	92.500	Pongo_abelii
ENSANAG00000023565	CMSS1	100	90.840	ENSPCOG00000020035	CMSS1	100	90.840	Propithecus_coquereli
ENSANAG00000023565	CMSS1	100	77.857	ENSPVAG00000017031	CMSS1	100	77.857	Pteropus_vampyrus
ENSANAG00000023565	CMSS1	91	48.302	ENSPNYG00000013428	cmss1	97	49.057	Pundamilia_nyererei
ENSANAG00000023565	CMSS1	100	47.811	ENSPNAG00000007912	cmss1	100	47.811	Pygocentrus_nattereri
ENSANAG00000023565	CMSS1	99	79.693	ENSRNOG00000027888	Cmss1	100	79.693	Rattus_norvegicus
ENSANAG00000023565	CMSS1	100	92.500	ENSRBIG00000037931	CMSS1	100	92.500	Rhinopithecus_bieti
ENSANAG00000023565	CMSS1	100	92.500	ENSRROG00000042910	CMSS1	100	92.500	Rhinopithecus_roxellana
ENSANAG00000023565	CMSS1	100	96.183	ENSSBOG00000030980	CMSS1	100	96.183	Saimiri_boliviensis_boliviensis
ENSANAG00000023565	CMSS1	94	74.104	ENSSHAG00000009321	CMSS1	99	74.104	Sarcophilus_harrisii
ENSANAG00000023565	CMSS1	100	54.082	ENSSFOG00015001509	cmss1	100	54.082	Scleropages_formosus
ENSANAG00000023565	CMSS1	100	51.020	ENSSMAG00000001653	cmss1	100	51.203	Scophthalmus_maximus
ENSANAG00000023565	CMSS1	100	51.027	ENSSDUG00000007719	cmss1	100	52.560	Seriola_dumerili
ENSANAG00000023565	CMSS1	79	62.319	ENSSLDG00000012300	cmss1	79	55.208	Seriola_lalandi_dorsalis
ENSANAG00000023565	CMSS1	100	73.665	ENSSARG00000003584	CMSS1	100	73.665	Sorex_araneus
ENSANAG00000023565	CMSS1	86	70.354	ENSSPUG00000003865	CMSS1	100	70.354	Sphenodon_punctatus
ENSANAG00000023565	CMSS1	79	62.621	ENSSPAG00000019182	cmss1	82	52.416	Stegastes_partitus
ENSANAG00000023565	CMSS1	100	91.071	ENSSSCG00000011970	CMSS1	100	91.071	Sus_scrofa
ENSANAG00000023565	CMSS1	87	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSANAG00000023565	CMSS1	100	49.296	ENSTRUG00000015265	cmss1	100	50.704	Takifugu_rubripes
ENSANAG00000023565	CMSS1	77	54.455	ENSTNIG00000002880	cmss1	87	49.372	Tetraodon_nigroviridis
ENSANAG00000023565	CMSS1	100	60.000	ENSTBEG00000016722	CMSS1	100	60.000	Tupaia_belangeri
ENSANAG00000023565	CMSS1	100	86.786	ENSTTRG00000001562	CMSS1	100	86.786	Tursiops_truncatus
ENSANAG00000023565	CMSS1	99	90.000	ENSUAMG00000024209	CMSS1	100	93.274	Ursus_americanus
ENSANAG00000023565	CMSS1	100	89.695	ENSUMAG00000001983	CMSS1	99	89.961	Ursus_maritimus
ENSANAG00000023565	CMSS1	100	66.786	ENSVPAG00000000263	CMSS1	100	66.786	Vicugna_pacos
ENSANAG00000023565	CMSS1	94	90.650	ENSVVUG00000021647	-	100	90.650	Vulpes_vulpes
ENSANAG00000023565	CMSS1	77	93.564	ENSVVUG00000007776	-	80	93.564	Vulpes_vulpes
ENSANAG00000023565	CMSS1	100	53.929	ENSXETG00000011858	cmss1	100	53.929	Xenopus_tropicalis
ENSANAG00000023565	CMSS1	79	61.538	ENSXCOG00000018724	cmss1	69	61.881	Xiphophorus_couchianus
ENSANAG00000023565	CMSS1	79	61.538	ENSXMAG00000011243	cmss1	76	61.881	Xiphophorus_maculatus