EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000024078 (Gene tree)
Gene ID: 105720881
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 62507 bases
Position: chrKZ207305.1:49069-111575
Accession: 105720881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000012288	FDF	PF09532.10	9.3e-19	1	1
ENSANAP00000012290	FDF	PF09532.10	9.3e-19	1	1
ENSANAP00000012288	LSM14	PF12701.7	9.7e-10	1	1
ENSANAP00000012290	LSM14	PF12701.7	9.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000030111	EDC3-202	1663	XM_012457622	ENSANAP00000012290	508 (aa)	XP_012313045	A0A2K5CUA7
ENSANAT00000030109	EDC3-201	1796	XM_012457623	ENSANAP00000012288	508 (aa)	XP_012313046	A0A2K5CUA7

Gene Model

Click here to download ENSANAG00000024078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000024078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000024078	EDC3	100	98.622	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSANAG00000024078	EDC3	100	56.505	ENSAPOG00000008655	EDC3	100	56.505	Acanthochromis_polyacanthus
ENSANAG00000024078	EDC3	100	70.000	ENSAPOG00000010791	edc3	100	70.000	Acanthochromis_polyacanthus
ENSANAG00000024078	EDC3	100	96.457	ENSAMEG00000008963	EDC3	100	96.457	Ailuropoda_melanoleuca
ENSANAG00000024078	EDC3	100	68.959	ENSACIG00000017751	edc3	100	68.959	Amphilophus_citrinellus
ENSANAG00000024078	EDC3	99	60.311	ENSACIG00000005330	EDC3	99	60.311	Amphilophus_citrinellus
ENSANAG00000024078	EDC3	100	70.000	ENSAOCG00000005431	edc3	100	70.000	Amphiprion_ocellaris
ENSANAG00000024078	EDC3	100	58.221	ENSAOCG00000009103	-	100	58.333	Amphiprion_ocellaris
ENSANAG00000024078	EDC3	100	58.333	ENSAPEG00000007841	EDC3	100	58.333	Amphiprion_percula
ENSANAG00000024078	EDC3	100	70.000	ENSAPEG00000000968	edc3	100	70.000	Amphiprion_percula
ENSANAG00000024078	EDC3	100	57.692	ENSATEG00000004205	-	100	57.692	Anabas_testudineus
ENSANAG00000024078	EDC3	100	69.941	ENSATEG00000015505	edc3	100	69.941	Anabas_testudineus
ENSANAG00000024078	EDC3	90	87.253	ENSAPLG00000008957	EDC3	100	87.253	Anas_platyrhynchos
ENSANAG00000024078	EDC3	78	87.154	ENSACAG00000000460	-	100	87.154	Anolis_carolinensis
ENSANAG00000024078	EDC3	100	68.369	ENSACLG00000007232	edc3	100	68.369	Astatotilapia_calliptera
ENSANAG00000024078	EDC3	99	58.869	ENSACLG00000018776	-	99	58.869	Astatotilapia_calliptera
ENSANAG00000024078	EDC3	100	70.392	ENSAMXG00000001589	edc3	100	70.392	Astyanax_mexicanus
ENSANAG00000024078	EDC3	100	97.047	ENSBTAG00000007308	EDC3	100	97.047	Bos_taurus
ENSANAG00000024078	EDC3	100	99.213	ENSCJAG00000017681	EDC3	100	99.213	Callithrix_jacchus
ENSANAG00000024078	EDC3	100	96.654	ENSCAFG00000017935	EDC3	100	96.654	Canis_familiaris
ENSANAG00000024078	EDC3	100	96.654	ENSCAFG00020003909	EDC3	100	96.654	Canis_lupus_dingo
ENSANAG00000024078	EDC3	100	96.850	ENSCHIG00000023658	EDC3	100	96.850	Capra_hircus
ENSANAG00000024078	EDC3	100	97.244	ENSTSYG00000004822	EDC3	100	97.244	Carlito_syrichta
ENSANAG00000024078	EDC3	100	95.472	ENSCPOG00000015595	EDC3	100	95.472	Cavia_porcellus
ENSANAG00000024078	EDC3	100	99.606	ENSCCAG00000021663	EDC3	100	99.606	Cebus_capucinus
ENSANAG00000024078	EDC3	100	98.819	ENSCATG00000037511	EDC3	100	98.819	Cercocebus_atys
ENSANAG00000024078	EDC3	100	95.276	ENSCLAG00000005700	EDC3	100	95.276	Chinchilla_lanigera
ENSANAG00000024078	EDC3	100	98.819	ENSCSAG00000014239	EDC3	100	98.819	Chlorocebus_sabaeus
ENSANAG00000024078	EDC3	100	89.370	ENSCPBG00000024239	EDC3	100	89.370	Chrysemys_picta_bellii
ENSANAG00000024078	EDC3	100	38.654	ENSCING00000022142	-	99	38.654	Ciona_intestinalis
ENSANAG00000024078	EDC3	100	98.819	ENSCANG00000028699	EDC3	100	98.819	Colobus_angolensis_palliatus
ENSANAG00000024078	EDC3	100	96.654	ENSCGRG00001013874	Edc3	100	96.654	Cricetulus_griseus_chok1gshd
ENSANAG00000024078	EDC3	100	96.654	ENSCGRG00000011885	Edc3	100	96.654	Cricetulus_griseus_crigri
ENSANAG00000024078	EDC3	99	69.882	ENSCSEG00000012996	edc3	99	69.882	Cynoglossus_semilaevis
ENSANAG00000024078	EDC3	100	68.566	ENSCVAG00000008023	edc3	100	68.566	Cyprinodon_variegatus
ENSANAG00000024078	EDC3	99	68.555	ENSDARG00000051931	edc3	99	68.811	Danio_rerio
ENSANAG00000024078	EDC3	100	85.078	ENSDNOG00000030661	EDC3	100	85.078	Dasypus_novemcinctus
ENSANAG00000024078	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSANAG00000024078	EDC3	100	97.835	ENSEASG00005005071	EDC3	100	97.835	Equus_asinus_asinus
ENSANAG00000024078	EDC3	100	97.835	ENSECAG00000017994	EDC3	100	97.835	Equus_caballus
ENSANAG00000024078	EDC3	100	66.082	ENSELUG00000005794	edc3	100	66.082	Esox_lucius
ENSANAG00000024078	EDC3	100	62.231	ENSELUG00000007607	EDC3	100	62.231	Esox_lucius
ENSANAG00000024078	EDC3	100	96.260	ENSFCAG00000002014	EDC3	100	96.260	Felis_catus
ENSANAG00000024078	EDC3	98	84.770	ENSFALG00000004543	EDC3	96	84.770	Ficedula_albicollis
ENSANAG00000024078	EDC3	100	95.276	ENSFDAG00000012582	EDC3	100	95.276	Fukomys_damarensis
ENSANAG00000024078	EDC3	100	69.804	ENSFHEG00000009375	edc3	100	69.804	Fundulus_heteroclitus
ENSANAG00000024078	EDC3	100	68.750	ENSGMOG00000002715	edc3	100	68.750	Gadus_morhua
ENSANAG00000024078	EDC3	100	88.780	ENSGALG00000040181	EDC3	100	88.780	Gallus_gallus
ENSANAG00000024078	EDC3	100	68.173	ENSGAFG00000014433	edc3	100	68.235	Gambusia_affinis
ENSANAG00000024078	EDC3	100	68.959	ENSGACG00000009783	edc3	100	68.959	Gasterosteus_aculeatus
ENSANAG00000024078	EDC3	99	55.662	ENSGACG00000014671	EDC3	99	56.455	Gasterosteus_aculeatus
ENSANAG00000024078	EDC3	100	88.976	ENSGAGG00000023477	EDC3	100	88.976	Gopherus_agassizii
ENSANAG00000024078	EDC3	100	98.819	ENSGGOG00000003552	EDC3	100	98.819	Gorilla_gorilla
ENSANAG00000024078	EDC3	99	58.869	ENSHBUG00000020817	EDC3	99	58.869	Haplochromis_burtoni
ENSANAG00000024078	EDC3	100	68.369	ENSHBUG00000003635	edc3	100	68.369	Haplochromis_burtoni
ENSANAG00000024078	EDC3	100	67.773	ENSHCOG00000016834	edc3	100	67.906	Hippocampus_comes
ENSANAG00000024078	EDC3	99	69.863	ENSIPUG00000005695	edc3	100	69.863	Ictalurus_punctatus
ENSANAG00000024078	EDC3	100	97.835	ENSSTOG00000013936	EDC3	100	97.835	Ictidomys_tridecemlineatus
ENSANAG00000024078	EDC3	100	95.669	ENSJJAG00000008074	Edc3	100	95.669	Jaculus_jaculus
ENSANAG00000024078	EDC3	100	56.102	ENSKMAG00000001987	EDC3	100	56.102	Kryptolebias_marmoratus
ENSANAG00000024078	EDC3	100	69.155	ENSKMAG00000001243	edc3	100	69.155	Kryptolebias_marmoratus
ENSANAG00000024078	EDC3	100	58.527	ENSLBEG00000017984	EDC3	100	58.527	Labrus_bergylta
ENSANAG00000024078	EDC3	100	69.608	ENSLBEG00000013435	edc3	99	69.608	Labrus_bergylta
ENSANAG00000024078	EDC3	100	77.670	ENSLACG00000014149	EDC3	100	77.670	Latimeria_chalumnae
ENSANAG00000024078	EDC3	99	67.251	ENSLOCG00000014625	edc3	99	67.251	Lepisosteus_oculatus
ENSANAG00000024078	EDC3	100	95.472	ENSLAFG00000002992	EDC3	100	95.472	Loxodonta_africana
ENSANAG00000024078	EDC3	100	98.425	ENSMFAG00000043074	EDC3	100	98.425	Macaca_fascicularis
ENSANAG00000024078	EDC3	100	98.425	ENSMMUG00000011071	EDC3	100	98.425	Macaca_mulatta
ENSANAG00000024078	EDC3	100	98.425	ENSMNEG00000035316	EDC3	100	98.425	Macaca_nemestrina
ENSANAG00000024078	EDC3	100	98.819	ENSMLEG00000030372	EDC3	100	98.819	Mandrillus_leucophaeus
ENSANAG00000024078	EDC3	100	69.941	ENSMAMG00000000505	edc3	100	69.941	Mastacembelus_armatus
ENSANAG00000024078	EDC3	99	57.031	ENSMAMG00000005423	-	99	57.031	Mastacembelus_armatus
ENSANAG00000024078	EDC3	100	68.369	ENSMZEG00005004892	edc3	100	68.369	Maylandia_zebra
ENSANAG00000024078	EDC3	99	59.180	ENSMZEG00005005654	EDC3	99	59.180	Maylandia_zebra
ENSANAG00000024078	EDC3	100	87.795	ENSMGAG00000002617	EDC3	100	87.795	Meleagris_gallopavo
ENSANAG00000024078	EDC3	100	97.244	ENSMICG00000043190	EDC3	100	97.244	Microcebus_murinus
ENSANAG00000024078	EDC3	100	96.654	ENSMOCG00000016205	Edc3	100	96.654	Microtus_ochrogaster
ENSANAG00000024078	EDC3	99	69.155	ENSMMOG00000012278	edc3	99	69.155	Mola_mola
ENSANAG00000024078	EDC3	100	92.913	ENSMODG00000009442	EDC3	100	92.913	Monodelphis_domestica
ENSANAG00000024078	EDC3	100	69.941	ENSMALG00000008658	edc3	100	69.941	Monopterus_albus
ENSANAG00000024078	EDC3	100	96.260	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSANAG00000024078	EDC3	100	95.866	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSANAG00000024078	EDC3	100	96.457	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSANAG00000024078	EDC3	100	95.669	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSANAG00000024078	EDC3	100	96.063	ENSMPUG00000017293	EDC3	100	96.063	Mustela_putorius_furo
ENSANAG00000024078	EDC3	100	97.059	ENSMLUG00000016382	EDC3	100	97.059	Myotis_lucifugus
ENSANAG00000024078	EDC3	100	96.063	ENSNGAG00000010923	Edc3	100	96.063	Nannospalax_galili
ENSANAG00000024078	EDC3	100	68.173	ENSNBRG00000002434	edc3	100	68.173	Neolamprologus_brichardi
ENSANAG00000024078	EDC3	99	59.180	ENSNBRG00000007881	EDC3	99	59.180	Neolamprologus_brichardi
ENSANAG00000024078	EDC3	100	89.173	ENSNLEG00000014577	EDC3	100	89.173	Nomascus_leucogenys
ENSANAG00000024078	EDC3	100	91.732	ENSMEUG00000009077	EDC3	100	91.732	Notamacropus_eugenii
ENSANAG00000024078	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSANAG00000024078	EDC3	100	68.566	ENSONIG00000008434	edc3	100	68.566	Oreochromis_niloticus
ENSANAG00000024078	EDC3	99	60.234	ENSONIG00000002932	-	99	60.234	Oreochromis_niloticus
ENSANAG00000024078	EDC3	78	92.443	ENSOCUG00000017740	EDC3	86	92.443	Oryctolagus_cuniculus
ENSANAG00000024078	EDC3	100	56.420	ENSORLG00000014399	-	98	56.420	Oryzias_latipes
ENSANAG00000024078	EDC3	100	67.976	ENSORLG00000004883	edc3	100	67.976	Oryzias_latipes
ENSANAG00000024078	EDC3	100	67.780	ENSORLG00020012262	edc3	100	67.780	Oryzias_latipes_hni
ENSANAG00000024078	EDC3	100	56.420	ENSORLG00020019446	-	100	56.420	Oryzias_latipes_hni
ENSANAG00000024078	EDC3	100	55.837	ENSORLG00015017635	-	96	55.837	Oryzias_latipes_hsok
ENSANAG00000024078	EDC3	100	67.578	ENSORLG00015005634	edc3	100	67.578	Oryzias_latipes_hsok
ENSANAG00000024078	EDC3	100	57.031	ENSOMEG00000017354	EDC3	100	57.031	Oryzias_melastigma
ENSANAG00000024078	EDC3	100	69.020	ENSOMEG00000014026	edc3	100	69.020	Oryzias_melastigma
ENSANAG00000024078	EDC3	100	97.638	ENSOGAG00000014441	EDC3	100	97.638	Otolemur_garnettii
ENSANAG00000024078	EDC3	100	96.464	ENSOARG00000003476	EDC3	100	96.464	Ovis_aries
ENSANAG00000024078	EDC3	100	98.819	ENSPPAG00000040143	EDC3	100	98.819	Pan_paniscus
ENSANAG00000024078	EDC3	100	96.654	ENSPPRG00000006257	EDC3	100	96.654	Panthera_pardus
ENSANAG00000024078	EDC3	100	96.654	ENSPTIG00000017424	EDC3	100	96.654	Panthera_tigris_altaica
ENSANAG00000024078	EDC3	100	98.819	ENSPTRG00000007279	EDC3	100	98.819	Pan_troglodytes
ENSANAG00000024078	EDC3	100	98.819	ENSPANG00000015997	EDC3	100	98.819	Papio_anubis
ENSANAG00000024078	EDC3	100	68.544	ENSPKIG00000004416	edc3	100	69.515	Paramormyrops_kingsleyae
ENSANAG00000024078	EDC3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSANAG00000024078	EDC3	100	83.661	ENSPSIG00000008474	EDC3	100	83.661	Pelodiscus_sinensis
ENSANAG00000024078	EDC3	100	66.732	ENSPMGG00000007223	edc3	100	66.732	Periophthalmus_magnuspinnatus
ENSANAG00000024078	EDC3	100	96.260	ENSPEMG00000015260	Edc3	100	96.260	Peromyscus_maniculatus_bairdii
ENSANAG00000024078	EDC3	100	90.945	ENSPCIG00000006276	EDC3	70	91.124	Phascolarctos_cinereus
ENSANAG00000024078	EDC3	100	69.066	ENSPFOG00000012204	edc3	100	69.066	Poecilia_formosa
ENSANAG00000024078	EDC3	100	69.066	ENSPLAG00000014420	edc3	100	69.066	Poecilia_latipinna
ENSANAG00000024078	EDC3	100	69.066	ENSPMEG00000023289	edc3	100	69.066	Poecilia_mexicana
ENSANAG00000024078	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSANAG00000024078	EDC3	100	97.638	ENSPPYG00000006642	EDC3	100	97.638	Pongo_abelii
ENSANAG00000024078	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSANAG00000024078	EDC3	100	97.441	ENSPCOG00000013364	EDC3	100	97.441	Propithecus_coquereli
ENSANAG00000024078	EDC3	100	96.654	ENSPVAG00000014733	EDC3	100	96.654	Pteropus_vampyrus
ENSANAG00000024078	EDC3	99	58.869	ENSPNYG00000009669	EDC3	99	58.869	Pundamilia_nyererei
ENSANAG00000024078	EDC3	100	68.369	ENSPNYG00000021797	edc3	100	68.369	Pundamilia_nyererei
ENSANAG00000024078	EDC3	100	69.844	ENSPNAG00000019657	edc3	100	69.844	Pygocentrus_nattereri
ENSANAG00000024078	EDC3	99	96.238	ENSRNOG00000019579	Edc3	99	96.238	Rattus_norvegicus
ENSANAG00000024078	EDC3	100	98.425	ENSRBIG00000019488	EDC3	100	98.425	Rhinopithecus_bieti
ENSANAG00000024078	EDC3	100	98.425	ENSRROG00000034959	EDC3	100	98.425	Rhinopithecus_roxellana
ENSANAG00000024078	EDC3	100	99.409	ENSSBOG00000004896	EDC3	100	99.409	Saimiri_boliviensis_boliviensis
ENSANAG00000024078	EDC3	96	91.616	ENSSHAG00000015075	EDC3	95	91.616	Sarcophilus_harrisii
ENSANAG00000024078	EDC3	100	69.942	ENSSFOG00015016939	edc3	100	70.817	Scleropages_formosus
ENSANAG00000024078	EDC3	100	63.333	ENSSFOG00015002439	edc3	100	64.981	Scleropages_formosus
ENSANAG00000024078	EDC3	100	69.020	ENSSMAG00000010695	edc3	100	69.548	Scophthalmus_maximus
ENSANAG00000024078	EDC3	99	57.115	ENSSMAG00000010176	-	99	57.115	Scophthalmus_maximus
ENSANAG00000024078	EDC3	100	59.533	ENSSDUG00000007671	EDC3	100	59.533	Seriola_dumerili
ENSANAG00000024078	EDC3	100	69.412	ENSSDUG00000021844	edc3	100	70.138	Seriola_dumerili
ENSANAG00000024078	EDC3	100	69.412	ENSSLDG00000022046	edc3	100	70.138	Seriola_lalandi_dorsalis
ENSANAG00000024078	EDC3	81	96.774	ENSSARG00000003907	EDC3	80	96.774	Sorex_araneus
ENSANAG00000024078	EDC3	100	88.583	ENSSPUG00000008232	EDC3	100	88.583	Sphenodon_punctatus
ENSANAG00000024078	EDC3	100	70.334	ENSSPAG00000010009	edc3	100	70.334	Stegastes_partitus
ENSANAG00000024078	EDC3	100	58.171	ENSSPAG00000020327	EDC3	100	58.171	Stegastes_partitus
ENSANAG00000024078	EDC3	100	97.638	ENSSSCG00000001903	EDC3	100	97.638	Sus_scrofa
ENSANAG00000024078	EDC3	100	88.386	ENSTGUG00000004007	EDC3	100	88.386	Taeniopygia_guttata
ENSANAG00000024078	EDC3	100	70.334	ENSTRUG00000017078	edc3	100	70.334	Takifugu_rubripes
ENSANAG00000024078	EDC3	100	68.885	ENSTNIG00000016047	edc3	100	68.885	Tetraodon_nigroviridis
ENSANAG00000024078	EDC3	100	97.047	ENSTTRG00000007990	EDC3	100	97.047	Tursiops_truncatus
ENSANAG00000024078	EDC3	100	96.457	ENSUAMG00000026710	-	100	96.457	Ursus_americanus
ENSANAG00000024078	EDC3	100	96.457	ENSUMAG00000005006	EDC3	96	96.457	Ursus_maritimus
ENSANAG00000024078	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSANAG00000024078	EDC3	100	96.850	ENSVVUG00000018601	EDC3	100	96.850	Vulpes_vulpes
ENSANAG00000024078	EDC3	68	82.759	ENSXETG00000010622	edc3	99	83.908	Xenopus_tropicalis
ENSANAG00000024078	EDC3	100	69.216	ENSXMAG00000007377	edc3	100	69.216	Xiphophorus_maculatus