EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000024107 (Gene tree)
Gene ID: -
Gene Symbol: UPF1
Alias: HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name: UPF1%2C RNA helicase and ATPase
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 20796 bases
Position: chrKZ208347.1:2052458-2073253
Accession: 105711027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000012377	UPF1_Zn_bind	PF09416.10	9.5e-75	1	1
ENSANAP00000012377	ResIII	PF04851.15	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000030198	UPF1-201	3279	XM_021669185	ENSANAP00000012377	1092 (aa)	XP_021524860	A0A2K5CUK7

Gene Model

Click here to download ENSANAG00000024107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000024107's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000024107	UPF1	97	97.209	ENSG00000005007	UPF1	95	97.209	Homo_sapiens
ENSANAG00000024107	UPF1	95	91.004	ENSAPOG00000023773	upf1	95	91.193	Acanthochromis_polyacanthus
ENSANAG00000024107	UPF1	95	92.498	ENSAPOG00000010916	-	95	92.593	Acanthochromis_polyacanthus
ENSANAG00000024107	UPF1	97	96.846	ENSAMEG00000011474	UPF1	96	96.846	Ailuropoda_melanoleuca
ENSANAG00000024107	UPF1	94	92.664	ENSACIG00000010985	-	100	92.761	Amphilophus_citrinellus
ENSANAG00000024107	UPF1	95	90.728	ENSACIG00000019949	upf1	95	91.193	Amphilophus_citrinellus
ENSANAG00000024107	UPF1	95	90.485	ENSAOCG00000018519	upf1	95	91.190	Amphiprion_ocellaris
ENSANAG00000024107	UPF1	95	92.498	ENSAOCG00000006352	-	100	90.077	Amphiprion_ocellaris
ENSANAG00000024107	UPF1	95	92.498	ENSAPEG00000006292	-	100	90.077	Amphiprion_percula
ENSANAG00000024107	UPF1	95	90.485	ENSAPEG00000016344	upf1	95	91.190	Amphiprion_percula
ENSANAG00000024107	UPF1	95	89.616	ENSATEG00000017867	upf1	95	90.552	Anabas_testudineus
ENSANAG00000024107	UPF1	95	92.498	ENSATEG00000016606	-	95	92.593	Anabas_testudineus
ENSANAG00000024107	UPF1	95	96.860	ENSAPLG00000009175	UPF1	99	96.860	Anas_platyrhynchos
ENSANAG00000024107	UPF1	95	92.395	ENSACLG00000022630	-	95	92.395	Astatotilapia_calliptera
ENSANAG00000024107	UPF1	95	90.539	ENSACLG00000007181	upf1	95	91.004	Astatotilapia_calliptera
ENSANAG00000024107	UPF1	96	92.351	ENSAMXG00000042187	upf1	95	92.918	Astyanax_mexicanus
ENSANAG00000024107	UPF1	97	96.933	ENSBTAG00000020922	UPF1	95	96.933	Bos_taurus
ENSANAG00000024107	UPF1	83	52.519	WBGene00004880	smg-2	94	49.661	Caenorhabditis_elegans
ENSANAG00000024107	UPF1	97	97.209	ENSCJAG00000019627	UPF1	95	97.209	Callithrix_jacchus
ENSANAG00000024107	UPF1	97	97.026	ENSCAFG00000014578	UPF1	95	97.026	Canis_familiaris
ENSANAG00000024107	UPF1	97	96.004	ENSCAFG00020012347	UPF1	95	96.004	Canis_lupus_dingo
ENSANAG00000024107	UPF1	97	97.116	ENSCHIG00000011018	UPF1	95	97.116	Capra_hircus
ENSANAG00000024107	UPF1	97	96.651	ENSTSYG00000008877	UPF1	99	96.651	Carlito_syrichta
ENSANAG00000024107	UPF1	96	96.523	ENSCAPG00000005758	UPF1	97	96.523	Cavia_aperea
ENSANAG00000024107	UPF1	95	97.424	ENSCPOG00000025463	UPF1	94	97.424	Cavia_porcellus
ENSANAG00000024107	UPF1	97	97.122	ENSCCAG00000032175	UPF1	96	97.122	Cebus_capucinus
ENSANAG00000024107	UPF1	99	96.150	ENSCATG00000040306	UPF1	100	96.150	Cercocebus_atys
ENSANAG00000024107	UPF1	97	96.750	ENSCLAG00000004037	UPF1	100	98.289	Chinchilla_lanigera
ENSANAG00000024107	UPF1	97	95.841	ENSCSAG00000005276	UPF1	96	95.841	Chlorocebus_sabaeus
ENSANAG00000024107	UPF1	95	96.110	ENSCPBG00000012513	UPF1	94	96.110	Chrysemys_picta_bellii
ENSANAG00000024107	UPF1	70	81.081	ENSCING00000021399	-	91	81.081	Ciona_intestinalis
ENSANAG00000024107	UPF1	94	72.375	ENSCSAVG00000006533	-	94	72.375	Ciona_savignyi
ENSANAG00000024107	UPF1	98	96.942	ENSCANG00000029819	UPF1	99	96.942	Colobus_angolensis_palliatus
ENSANAG00000024107	UPF1	98	94.917	ENSCGRG00001021067	Upf1	96	94.917	Cricetulus_griseus_chok1gshd
ENSANAG00000024107	UPF1	95	97.441	ENSCGRG00000013480	Upf1	99	97.441	Cricetulus_griseus_crigri
ENSANAG00000024107	UPF1	95	92.490	ENSCSEG00000016159	-	95	92.490	Cynoglossus_semilaevis
ENSANAG00000024107	UPF1	96	85.122	ENSCSEG00000017239	upf1	95	85.311	Cynoglossus_semilaevis
ENSANAG00000024107	UPF1	95	92.308	ENSCVAG00000010561	upf1	95	92.308	Cyprinodon_variegatus
ENSANAG00000024107	UPF1	96	92.162	ENSDARG00000016302	upf1	95	92.729	Danio_rerio
ENSANAG00000024107	UPF1	95	95.442	ENSDORG00000009984	Upf1	97	94.299	Dipodomys_ordii
ENSANAG00000024107	UPF1	80	72.849	FBgn0030354	Upf1	80	68.930	Drosophila_melanogaster
ENSANAG00000024107	UPF1	97	95.911	ENSEASG00005006549	UPF1	95	95.911	Equus_asinus_asinus
ENSANAG00000024107	UPF1	97	95.911	ENSECAG00000010639	UPF1	95	95.911	Equus_caballus
ENSANAG00000024107	UPF1	96	89.662	ENSELUG00000020917	upf1	95	89.944	Esox_lucius
ENSANAG00000024107	UPF1	96	91.174	ENSELUG00000012916	-	95	91.362	Esox_lucius
ENSANAG00000024107	UPF1	97	96.933	ENSFCAG00000009757	UPF1	95	96.933	Felis_catus
ENSANAG00000024107	UPF1	97	94.450	ENSFALG00000009312	UPF1	98	94.450	Ficedula_albicollis
ENSANAG00000024107	UPF1	98	96.037	ENSFDAG00000014816	UPF1	100	98.194	Fukomys_damarensis
ENSANAG00000024107	UPF1	95	88.136	ENSFHEG00000006428	upf1	94	88.136	Fundulus_heteroclitus
ENSANAG00000024107	UPF1	87	93.648	ENSFHEG00000016276	-	97	93.829	Fundulus_heteroclitus
ENSANAG00000024107	UPF1	96	91.596	ENSGMOG00000007541	upf1	95	92.162	Gadus_morhua
ENSANAG00000024107	UPF1	95	96.575	ENSGALG00000003220	UPF1	93	96.575	Gallus_gallus
ENSANAG00000024107	UPF1	95	92.205	ENSGAFG00000004831	upf1	95	92.205	Gambusia_affinis
ENSANAG00000024107	UPF1	63	91.915	ENSGAFG00000015443	-	88	89.698	Gambusia_affinis
ENSANAG00000024107	UPF1	95	96.480	ENSGAGG00000022217	UPF1	94	96.480	Gopherus_agassizii
ENSANAG00000024107	UPF1	95	97.624	ENSGGOG00000002608	UPF1	99	97.624	Gorilla_gorilla
ENSANAG00000024107	UPF1	82	100.000	ENSHBUG00000008939	upf1	89	100.000	Haplochromis_burtoni
ENSANAG00000024107	UPF1	82	86.207	ENSHBUG00000014694	upf1	90	86.207	Haplochromis_burtoni
ENSANAG00000024107	UPF1	97	96.651	ENSHGLG00000010900	UPF1	95	96.651	Heterocephalus_glaber_female
ENSANAG00000024107	UPF1	95	96.293	ENSHGLG00100005904	UPF1	97	96.293	Heterocephalus_glaber_male
ENSANAG00000024107	UPF1	95	91.350	ENSHCOG00000008918	upf1	100	91.483	Hippocampus_comes
ENSANAG00000024107	UPF1	96	92.823	ENSIPUG00000005108	UPF1	95	93.296	Ictalurus_punctatus
ENSANAG00000024107	UPF1	98	96.488	ENSSTOG00000009196	UPF1	96	96.488	Ictidomys_tridecemlineatus
ENSANAG00000024107	UPF1	97	96.093	ENSJJAG00000023151	Upf1	96	96.093	Jaculus_jaculus
ENSANAG00000024107	UPF1	95	92.593	ENSKMAG00000004962	upf1	95	92.593	Kryptolebias_marmoratus
ENSANAG00000024107	UPF1	95	92.308	ENSLBEG00000027848	-	95	92.403	Labrus_bergylta
ENSANAG00000024107	UPF1	95	89.222	ENSLBEG00000014862	upf1	95	90.534	Labrus_bergylta
ENSANAG00000024107	UPF1	62	95.265	ENSLACG00000008482	UPF1	100	95.265	Latimeria_chalumnae
ENSANAG00000024107	UPF1	96	94.329	ENSLOCG00000002072	upf1	95	94.423	Lepisosteus_oculatus
ENSANAG00000024107	UPF1	97	96.365	ENSLAFG00000014963	UPF1	95	96.365	Loxodonta_africana
ENSANAG00000024107	UPF1	97	97.209	ENSMFAG00000037748	UPF1	96	97.122	Macaca_fascicularis
ENSANAG00000024107	UPF1	98	96.858	ENSMMUG00000023286	UPF1	96	96.858	Macaca_mulatta
ENSANAG00000024107	UPF1	97	97.209	ENSMNEG00000000046	UPF1	96	97.122	Macaca_nemestrina
ENSANAG00000024107	UPF1	95	98.669	ENSMLEG00000028404	UPF1	100	98.669	Mandrillus_leucophaeus
ENSANAG00000024107	UPF1	95	91.738	ENSMAMG00000006231	-	95	92.308	Mastacembelus_armatus
ENSANAG00000024107	UPF1	95	89.429	ENSMAMG00000006229	upf1	95	90.552	Mastacembelus_armatus
ENSANAG00000024107	UPF1	95	92.395	ENSMZEG00005016386	-	95	92.395	Maylandia_zebra
ENSANAG00000024107	UPF1	95	89.439	ENSMZEG00005003489	upf1	95	90.789	Maylandia_zebra
ENSANAG00000024107	UPF1	95	96.388	ENSMGAG00000004745	UPF1	100	96.388	Meleagris_gallopavo
ENSANAG00000024107	UPF1	97	96.536	ENSMAUG00000011398	Upf1	96	96.536	Mesocricetus_auratus
ENSANAG00000024107	UPF1	97	95.907	ENSMICG00000001659	UPF1	95	95.907	Microcebus_murinus
ENSANAG00000024107	UPF1	98	95.933	ENSMOCG00000005699	Upf1	96	95.933	Microtus_ochrogaster
ENSANAG00000024107	UPF1	95	90.649	ENSMMOG00000007881	upf1	94	91.230	Mola_mola
ENSANAG00000024107	UPF1	95	90.218	ENSMMOG00000007537	-	99	90.313	Mola_mola
ENSANAG00000024107	UPF1	97	96.097	ENSMODG00000003689	UPF1	95	96.219	Monodelphis_domestica
ENSANAG00000024107	UPF1	96	89.972	ENSMALG00000000144	upf1	95	90.350	Monopterus_albus
ENSANAG00000024107	UPF1	95	91.210	ENSMALG00000018100	-	95	91.304	Monopterus_albus
ENSANAG00000024107	UPF1	98	95.841	MGP_CAROLIEiJ_G0031142	Upf1	96	95.841	Mus_caroli
ENSANAG00000024107	UPF1	98	95.841	ENSMUSG00000058301	Upf1	96	95.841	Mus_musculus
ENSANAG00000024107	UPF1	98	95.841	MGP_PahariEiJ_G0021607	Upf1	96	95.841	Mus_pahari
ENSANAG00000024107	UPF1	98	95.841	MGP_SPRETEiJ_G0032260	Upf1	96	95.841	Mus_spretus
ENSANAG00000024107	UPF1	97	96.004	ENSMPUG00000015516	UPF1	95	96.004	Mustela_putorius_furo
ENSANAG00000024107	UPF1	97	94.848	ENSMLUG00000012122	UPF1	96	94.848	Myotis_lucifugus
ENSANAG00000024107	UPF1	98	96.015	ENSNGAG00000024107	Upf1	95	96.015	Nannospalax_galili
ENSANAG00000024107	UPF1	94	91.538	ENSNBRG00000022069	-	100	91.538	Neolamprologus_brichardi
ENSANAG00000024107	UPF1	95	88.742	ENSNBRG00000000670	upf1	95	89.205	Neolamprologus_brichardi
ENSANAG00000024107	UPF1	95	92.871	ENSNLEG00000006062	UPF1	100	92.871	Nomascus_leucogenys
ENSANAG00000024107	UPF1	79	94.314	ENSMEUG00000014146	-	78	94.314	Notamacropus_eugenii
ENSANAG00000024107	UPF1	95	89.259	ENSOPRG00000014018	UPF1	100	89.259	Ochotona_princeps
ENSANAG00000024107	UPF1	97	96.565	ENSODEG00000012426	UPF1	96	96.565	Octodon_degus
ENSANAG00000024107	UPF1	95	89.720	ENSONIG00000010452	upf1	95	91.071	Oreochromis_niloticus
ENSANAG00000024107	UPF1	95	92.490	ENSONIG00000012729	-	95	92.490	Oreochromis_niloticus
ENSANAG00000024107	UPF1	99	93.514	ENSOANG00000004568	UPF1	98	93.514	Ornithorhynchus_anatinus
ENSANAG00000024107	UPF1	95	92.213	ENSORLG00000008453	upf1	95	92.213	Oryzias_latipes
ENSANAG00000024107	UPF1	95	92.213	ENSORLG00020014758	upf1	95	92.213	Oryzias_latipes_hni
ENSANAG00000024107	UPF1	95	92.213	ENSORLG00015010165	upf1	100	90.723	Oryzias_latipes_hsok
ENSANAG00000024107	UPF1	95	92.308	ENSOMEG00000003665	upf1	95	92.308	Oryzias_melastigma
ENSANAG00000024107	UPF1	97	96.093	ENSOGAG00000012866	UPF1	95	96.093	Otolemur_garnettii
ENSANAG00000024107	UPF1	92	98.028	ENSOARG00000010739	UPF1	93	98.028	Ovis_aries
ENSANAG00000024107	UPF1	98	96.673	ENSPPAG00000043884	UPF1	98	96.673	Pan_paniscus
ENSANAG00000024107	UPF1	97	96.933	ENSPPRG00000023470	UPF1	95	96.933	Panthera_pardus
ENSANAG00000024107	UPF1	95	95.243	ENSPTIG00000010159	UPF1	99	95.243	Panthera_tigris_altaica
ENSANAG00000024107	UPF1	97	97.209	ENSPTRG00000010721	UPF1	96	97.122	Pan_troglodytes
ENSANAG00000024107	UPF1	97	97.209	ENSPANG00000008847	UPF1	96	97.122	Papio_anubis
ENSANAG00000024107	UPF1	89	92.113	ENSPKIG00000006069	upf1	94	92.113	Paramormyrops_kingsleyae
ENSANAG00000024107	UPF1	69	96.078	ENSPSIG00000009491	UPF1	100	96.078	Pelodiscus_sinensis
ENSANAG00000024107	UPF1	95	89.100	ENSPMGG00000017327	upf1	95	89.309	Periophthalmus_magnuspinnatus
ENSANAG00000024107	UPF1	98	95.933	ENSPEMG00000001085	Upf1	96	95.933	Peromyscus_maniculatus_bairdii
ENSANAG00000024107	UPF1	98	85.899	ENSPMAG00000001206	upf1	97	85.899	Petromyzon_marinus
ENSANAG00000024107	UPF1	99	92.889	ENSPCIG00000006156	UPF1	98	92.889	Phascolarctos_cinereus
ENSANAG00000024107	UPF1	96	88.609	ENSPLAG00000018155	-	95	88.609	Poecilia_latipinna
ENSANAG00000024107	UPF1	95	92.300	ENSPLAG00000016232	-	95	92.300	Poecilia_latipinna
ENSANAG00000024107	UPF1	95	92.395	ENSPMEG00000016319	-	95	92.395	Poecilia_mexicana
ENSANAG00000024107	UPF1	96	89.182	ENSPMEG00000011443	-	95	89.182	Poecilia_mexicana
ENSANAG00000024107	UPF1	96	89.169	ENSPREG00000009940	upf1	95	89.169	Poecilia_reticulata
ENSANAG00000024107	UPF1	95	92.110	ENSPREG00000011247	-	95	92.110	Poecilia_reticulata
ENSANAG00000024107	UPF1	97	92.000	ENSPPYG00000009752	UPF1	95	92.000	Pongo_abelii
ENSANAG00000024107	UPF1	67	100.000	ENSPCAG00000012962	UPF1	65	100.000	Procavia_capensis
ENSANAG00000024107	UPF1	97	96.930	ENSPCOG00000023813	UPF1	95	96.930	Propithecus_coquereli
ENSANAG00000024107	UPF1	65	100.000	ENSPVAG00000003183	UPF1	63	100.000	Pteropus_vampyrus
ENSANAG00000024107	UPF1	95	92.395	ENSPNYG00000016731	-	95	92.395	Pundamilia_nyererei
ENSANAG00000024107	UPF1	95	89.439	ENSPNYG00000003694	upf1	95	90.789	Pundamilia_nyererei
ENSANAG00000024107	UPF1	96	92.351	ENSPNAG00000025614	upf1	95	92.918	Pygocentrus_nattereri
ENSANAG00000024107	UPF1	98	95.841	ENSRNOG00000020134	Upf1	96	95.841	Rattus_norvegicus
ENSANAG00000024107	UPF1	98	94.717	ENSRBIG00000013894	UPF1	98	97.078	Rhinopithecus_bieti
ENSANAG00000024107	UPF1	98	97.034	ENSRROG00000040935	UPF1	99	97.034	Rhinopithecus_roxellana
ENSANAG00000024107	UPF1	74	55.381	YMR080C	NAM7	84	55.381	Saccharomyces_cerevisiae
ENSANAG00000024107	UPF1	99	97.802	ENSSBOG00000023632	UPF1	99	97.802	Saimiri_boliviensis_boliviensis
ENSANAG00000024107	UPF1	95	97.531	ENSSHAG00000010499	UPF1	100	97.531	Sarcophilus_harrisii
ENSANAG00000024107	UPF1	96	94.423	ENSSFOG00015021095	upf1	99	94.867	Scleropages_formosus
ENSANAG00000024107	UPF1	95	88.847	ENSSMAG00000005055	upf1	95	89.794	Scophthalmus_maximus
ENSANAG00000024107	UPF1	96	91.974	ENSSMAG00000021018	-	95	92.068	Scophthalmus_maximus
ENSANAG00000024107	UPF1	95	89.616	ENSSDUG00000013320	upf1	95	90.739	Seriola_dumerili
ENSANAG00000024107	UPF1	95	92.688	ENSSDUG00000009629	-	95	92.783	Seriola_dumerili
ENSANAG00000024107	UPF1	95	90.463	ENSSLDG00000020868	upf1	95	91.046	Seriola_lalandi_dorsalis
ENSANAG00000024107	UPF1	95	92.688	ENSSLDG00000006878	-	95	92.783	Seriola_lalandi_dorsalis
ENSANAG00000024107	UPF1	95	96.384	ENSSPUG00000010538	UPF1	94	96.384	Sphenodon_punctatus
ENSANAG00000024107	UPF1	95	88.783	ENSSPAG00000000003	upf1	95	88.815	Stegastes_partitus
ENSANAG00000024107	UPF1	95	92.681	ENSSPAG00000011521	-	95	92.681	Stegastes_partitus
ENSANAG00000024107	UPF1	97	96.840	ENSSSCG00000039301	UPF1	99	97.336	Sus_scrofa
ENSANAG00000024107	UPF1	77	89.803	ENSTGUG00000001057	UPF1	89	94.992	Taeniopygia_guttata
ENSANAG00000024107	UPF1	96	91.021	ENSTRUG00000005131	-	95	91.115	Takifugu_rubripes
ENSANAG00000024107	UPF1	95	90.580	ENSTRUG00000000150	upf1	95	90.580	Takifugu_rubripes
ENSANAG00000024107	UPF1	95	93.530	ENSTTRG00000011544	UPF1	98	89.767	Tursiops_truncatus
ENSANAG00000024107	UPF1	97	95.911	ENSUAMG00000007093	UPF1	95	95.911	Ursus_americanus
ENSANAG00000024107	UPF1	97	97.106	ENSUMAG00000006652	UPF1	99	97.336	Ursus_maritimus
ENSANAG00000024107	UPF1	97	96.004	ENSVVUG00000007797	UPF1	95	96.004	Vulpes_vulpes
ENSANAG00000024107	UPF1	95	82.275	ENSXETG00000013602	upf1	93	82.275	Xenopus_tropicalis
ENSANAG00000024107	UPF1	94	92.514	ENSXCOG00000005764	-	100	92.514	Xiphophorus_couchianus
ENSANAG00000024107	UPF1	92	88.770	ENSXCOG00000015275	-	92	88.770	Xiphophorus_couchianus
ENSANAG00000024107	UPF1	95	92.205	ENSXMAG00000002540	-	95	92.205	Xiphophorus_maculatus
ENSANAG00000024107	UPF1	96	89.067	ENSXMAG00000001703	-	95	89.067	Xiphophorus_maculatus