EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000024617 (Gene tree)
Gene ID: 105712971
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 77254 bases
Position: chrKZ208815.1:13030588-13107841
Accession: 105712971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000013454	Npa1	PF11707.8	2e-86	1	1
ENSANAP00000013460	Npa1	PF11707.8	3.2e-86	1	1
ENSANAP00000013448	Npa1	PF11707.8	5.1e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000031287	URB1-203	6834	-	ENSANAP00000013460	2277 (aa)	-	A0A2K5CXP0
ENSANAT00000031275	URB1-201	8778	XM_012446449	ENSANAP00000013448	2271 (aa)	XP_012301872	A0A2K5CXM6
ENSANAT00000031281	URB1-202	8640	XM_012446463	ENSANAP00000013454	2225 (aa)	XP_012301886	A0A2K5CXN8

Gene Model

Click here to download ENSANAG00000024617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000024617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000024617	URB1	99	93.548	ENSG00000142207	URB1	100	93.486	Homo_sapiens
ENSANAG00000024617	URB1	97	48.185	ENSAPOG00000020308	urb1	99	48.632	Acanthochromis_polyacanthus
ENSANAG00000024617	URB1	100	81.346	ENSAMEG00000011998	URB1	99	81.390	Ailuropoda_melanoleuca
ENSANAG00000024617	URB1	94	45.142	ENSACIG00000003248	urb1	96	45.142	Amphilophus_citrinellus
ENSANAG00000024617	URB1	99	41.268	ENSAOCG00000010364	urb1	99	41.535	Amphiprion_ocellaris
ENSANAG00000024617	URB1	97	52.898	ENSAPEG00000010758	urb1	99	52.898	Amphiprion_percula
ENSANAG00000024617	URB1	99	43.648	ENSATEG00000011790	urb1	97	44.484	Anabas_testudineus
ENSANAG00000024617	URB1	97	56.737	ENSAPLG00000012791	URB1	100	56.647	Anas_platyrhynchos
ENSANAG00000024617	URB1	99	53.642	ENSACAG00000002817	URB1	98	53.589	Anolis_carolinensis
ENSANAG00000024617	URB1	99	44.832	ENSACLG00000024865	urb1	99	44.958	Astatotilapia_calliptera
ENSANAG00000024617	URB1	99	39.868	ENSAMXG00000012306	urb1	99	39.991	Astyanax_mexicanus
ENSANAG00000024617	URB1	99	77.476	ENSBTAG00000012412	URB1	99	77.520	Bos_taurus
ENSANAG00000024617	URB1	100	94.991	ENSCJAG00000009118	URB1	100	94.991	Callithrix_jacchus
ENSANAG00000024617	URB1	100	81.527	ENSCAFG00000008892	URB1	100	81.527	Canis_familiaris
ENSANAG00000024617	URB1	100	80.510	ENSCAFG00020025994	-	100	80.510	Canis_lupus_dingo
ENSANAG00000024617	URB1	100	81.346	ENSCAFG00020025987	-	100	81.346	Canis_lupus_dingo
ENSANAG00000024617	URB1	99	76.994	ENSCHIG00000015645	URB1	99	77.038	Capra_hircus
ENSANAG00000024617	URB1	100	86.444	ENSTSYG00000013286	URB1	99	86.444	Carlito_syrichta
ENSANAG00000024617	URB1	98	79.245	ENSCAPG00000015589	URB1	99	79.245	Cavia_aperea
ENSANAG00000024617	URB1	99	80.440	ENSCPOG00000006748	URB1	99	80.440	Cavia_porcellus
ENSANAG00000024617	URB1	100	96.127	ENSCCAG00000021299	URB1	100	96.127	Cebus_capucinus
ENSANAG00000024617	URB1	100	93.486	ENSCATG00000042630	URB1	100	93.486	Cercocebus_atys
ENSANAG00000024617	URB1	100	80.553	ENSCLAG00000005262	URB1	100	80.553	Chinchilla_lanigera
ENSANAG00000024617	URB1	100	91.718	ENSCSAG00000009584	URB1	100	91.718	Chlorocebus_sabaeus
ENSANAG00000024617	URB1	99	59.353	ENSCPBG00000006454	URB1	99	59.568	Chrysemys_picta_bellii
ENSANAG00000024617	URB1	100	93.574	ENSCANG00000031088	URB1	100	93.574	Colobus_angolensis_palliatus
ENSANAG00000024617	URB1	99	76.447	ENSCGRG00001010616	Urb1	100	76.220	Cricetulus_griseus_chok1gshd
ENSANAG00000024617	URB1	98	76.180	ENSCGRG00000015840	Urb1	100	76.180	Cricetulus_griseus_crigri
ENSANAG00000024617	URB1	97	50.270	ENSCSEG00000012616	urb1	99	42.445	Cynoglossus_semilaevis
ENSANAG00000024617	URB1	97	52.132	ENSCVAG00000009076	urb1	99	52.371	Cyprinodon_variegatus
ENSANAG00000024617	URB1	99	43.152	ENSDARG00000060308	urb1	99	43.565	Danio_rerio
ENSANAG00000024617	URB1	85	80.911	ENSDNOG00000015586	URB1	99	80.911	Dasypus_novemcinctus
ENSANAG00000024617	URB1	100	80.026	ENSDORG00000006735	Urb1	100	80.026	Dipodomys_ordii
ENSANAG00000024617	URB1	92	80.847	ENSETEG00000009080	URB1	92	80.847	Echinops_telfairi
ENSANAG00000024617	URB1	100	81.522	ENSEASG00005007711	URB1	100	81.451	Equus_asinus_asinus
ENSANAG00000024617	URB1	97	88.889	ENSECAG00000013206	URB1	100	88.801	Equus_caballus
ENSANAG00000024617	URB1	58	86.611	ENSEEUG00000003626	-	57	86.611	Erinaceus_europaeus
ENSANAG00000024617	URB1	99	44.777	ENSELUG00000020516	urb1	98	44.733	Esox_lucius
ENSANAG00000024617	URB1	100	81.214	ENSFCAG00000002177	URB1	100	81.214	Felis_catus
ENSANAG00000024617	URB1	98	51.858	ENSFALG00000004636	URB1	99	51.977	Ficedula_albicollis
ENSANAG00000024617	URB1	100	80.079	ENSFDAG00000007288	URB1	95	80.079	Fukomys_damarensis
ENSANAG00000024617	URB1	99	41.426	ENSFHEG00000000202	urb1	99	41.880	Fundulus_heteroclitus
ENSANAG00000024617	URB1	92	48.089	ENSGMOG00000001838	urb1	93	48.050	Gadus_morhua
ENSANAG00000024617	URB1	99	56.811	ENSGALG00000015887	URB1	99	56.835	Gallus_gallus
ENSANAG00000024617	URB1	94	53.426	ENSGAFG00000020694	urb1	97	53.680	Gambusia_affinis
ENSANAG00000024617	URB1	99	44.673	ENSGACG00000011703	urb1	99	44.673	Gasterosteus_aculeatus
ENSANAG00000024617	URB1	99	58.803	ENSGAGG00000022544	URB1	99	59.013	Gopherus_agassizii
ENSANAG00000024617	URB1	100	93.662	ENSGGOG00000000285	URB1	100	93.662	Gorilla_gorilla
ENSANAG00000024617	URB1	99	44.832	ENSHBUG00000001904	urb1	99	44.958	Haplochromis_burtoni
ENSANAG00000024617	URB1	99	78.683	ENSHGLG00000004907	URB1	99	78.683	Heterocephalus_glaber_female
ENSANAG00000024617	URB1	99	79.456	ENSHGLG00100010749	URB1	99	79.456	Heterocephalus_glaber_male
ENSANAG00000024617	URB1	71	52.907	ENSHCOG00000018683	urb1	96	53.800	Hippocampus_comes
ENSANAG00000024617	URB1	99	40.921	ENSIPUG00000014721	urb1	99	40.877	Ictalurus_punctatus
ENSANAG00000024617	URB1	100	82.645	ENSSTOG00000004539	URB1	100	82.645	Ictidomys_tridecemlineatus
ENSANAG00000024617	URB1	97	47.031	ENSKMAG00000006001	urb1	98	47.244	Kryptolebias_marmoratus
ENSANAG00000024617	URB1	95	52.201	ENSLBEG00000027208	urb1	99	52.559	Labrus_bergylta
ENSANAG00000024617	URB1	99	48.832	ENSLACG00000017059	URB1	100	48.832	Latimeria_chalumnae
ENSANAG00000024617	URB1	99	46.058	ENSLOCG00000009190	urb1	99	46.015	Lepisosteus_oculatus
ENSANAG00000024617	URB1	99	78.518	ENSLAFG00000010407	URB1	100	78.518	Loxodonta_africana
ENSANAG00000024617	URB1	100	93.530	ENSMFAG00000034391	URB1	97	93.530	Macaca_fascicularis
ENSANAG00000024617	URB1	100	93.398	ENSMMUG00000010295	URB1	100	93.398	Macaca_mulatta
ENSANAG00000024617	URB1	100	92.077	ENSMNEG00000032981	URB1	100	92.077	Macaca_nemestrina
ENSANAG00000024617	URB1	100	93.794	ENSMLEG00000041435	URB1	100	93.794	Mandrillus_leucophaeus
ENSANAG00000024617	URB1	99	43.220	ENSMAMG00000011238	urb1	99	43.039	Mastacembelus_armatus
ENSANAG00000024617	URB1	99	40.789	ENSMZEG00005011862	urb1	99	42.015	Maylandia_zebra
ENSANAG00000024617	URB1	98	57.803	ENSMGAG00000014512	URB1	99	57.626	Meleagris_gallopavo
ENSANAG00000024617	URB1	92	79.562	ENSMAUG00000010516	Urb1	99	79.676	Mesocricetus_auratus
ENSANAG00000024617	URB1	99	85.167	ENSMICG00000016424	URB1	99	85.167	Microcebus_murinus
ENSANAG00000024617	URB1	99	74.692	ENSMOCG00000012613	Urb1	99	74.473	Microtus_ochrogaster
ENSANAG00000024617	URB1	99	64.298	ENSMODG00000021076	URB1	99	64.167	Monodelphis_domestica
ENSANAG00000024617	URB1	96	52.754	ENSMALG00000017411	urb1	99	53.448	Monopterus_albus
ENSANAG00000024617	URB1	99	75.770	MGP_CAROLIEiJ_G0020948	Urb1	99	75.770	Mus_caroli
ENSANAG00000024617	URB1	99	75.858	ENSMUSG00000039929	Urb1	99	75.858	Mus_musculus
ENSANAG00000024617	URB1	99	75.989	MGP_PahariEiJ_G0016653	Urb1	99	75.989	Mus_pahari
ENSANAG00000024617	URB1	99	75.715	MGP_SPRETEiJ_G0021854	Urb1	99	75.715	Mus_spretus
ENSANAG00000024617	URB1	100	79.595	ENSMPUG00000001123	URB1	100	79.595	Mustela_putorius_furo
ENSANAG00000024617	URB1	99	77.509	ENSNGAG00000001905	Urb1	99	77.509	Nannospalax_galili
ENSANAG00000024617	URB1	82	45.699	ENSNBRG00000001049	urb1	99	45.982	Neolamprologus_brichardi
ENSANAG00000024617	URB1	99	91.781	ENSNLEG00000026872	URB1	100	91.725	Nomascus_leucogenys
ENSANAG00000024617	URB1	93	66.221	ENSMEUG00000010828	URB1	96	59.641	Notamacropus_eugenii
ENSANAG00000024617	URB1	99	74.089	ENSOPRG00000013482	URB1	100	74.089	Ochotona_princeps
ENSANAG00000024617	URB1	100	78.866	ENSODEG00000002587	URB1	99	78.866	Octodon_degus
ENSANAG00000024617	URB1	99	44.967	ENSONIG00000005599	urb1	99	45.139	Oreochromis_niloticus
ENSANAG00000024617	URB1	99	80.608	ENSOCUG00000009381	URB1	99	80.608	Oryctolagus_cuniculus
ENSANAG00000024617	URB1	99	43.482	ENSORLG00000003429	urb1	99	43.524	Oryzias_latipes
ENSANAG00000024617	URB1	99	43.325	ENSORLG00020013785	urb1	99	43.366	Oryzias_latipes_hni
ENSANAG00000024617	URB1	95	46.442	ENSORLG00015019421	urb1	97	46.521	Oryzias_latipes_hsok
ENSANAG00000024617	URB1	77	51.297	ENSOMEG00000002094	urb1	97	51.297	Oryzias_melastigma
ENSANAG00000024617	URB1	99	84.808	ENSOGAG00000017140	URB1	100	84.676	Otolemur_garnettii
ENSANAG00000024617	URB1	97	78.014	ENSOARG00000013679	URB1	99	78.014	Ovis_aries
ENSANAG00000024617	URB1	100	93.750	ENSPPAG00000003423	URB1	100	93.750	Pan_paniscus
ENSANAG00000024617	URB1	100	81.478	ENSPPRG00000023131	URB1	100	81.478	Panthera_pardus
ENSANAG00000024617	URB1	93	79.694	ENSPTIG00000016125	URB1	99	79.694	Panthera_tigris_altaica
ENSANAG00000024617	URB1	100	93.706	ENSPTRG00000013852	URB1	100	93.706	Pan_troglodytes
ENSANAG00000024617	URB1	100	93.794	ENSPANG00000021964	URB1	100	93.794	Papio_anubis
ENSANAG00000024617	URB1	99	45.799	ENSPKIG00000003683	urb1	98	45.917	Paramormyrops_kingsleyae
ENSANAG00000024617	URB1	99	76.144	ENSPEMG00000021205	Urb1	99	76.144	Peromyscus_maniculatus_bairdii
ENSANAG00000024617	URB1	80	33.876	ENSPMAG00000009733	URB1	100	33.927	Petromyzon_marinus
ENSANAG00000024617	URB1	99	64.007	ENSPCIG00000016350	URB1	99	64.193	Phascolarctos_cinereus
ENSANAG00000024617	URB1	96	43.321	ENSPLAG00000004371	urb1	99	43.321	Poecilia_latipinna
ENSANAG00000024617	URB1	98	43.975	ENSPMEG00000006634	urb1	98	44.038	Poecilia_mexicana
ENSANAG00000024617	URB1	98	44.014	ENSPREG00000013453	urb1	98	44.211	Poecilia_reticulata
ENSANAG00000024617	URB1	99	93.195	ENSPPYG00000011359	URB1	100	93.090	Pongo_abelii
ENSANAG00000024617	URB1	98	80.905	ENSPCAG00000007430	URB1	96	80.905	Procavia_capensis
ENSANAG00000024617	URB1	100	85.960	ENSPCOG00000022695	URB1	100	85.960	Propithecus_coquereli
ENSANAG00000024617	URB1	100	79.806	ENSPVAG00000000889	URB1	100	79.806	Pteropus_vampyrus
ENSANAG00000024617	URB1	99	43.632	ENSPNYG00000010589	urb1	99	43.747	Pundamilia_nyererei
ENSANAG00000024617	URB1	99	41.003	ENSPNAG00000019324	urb1	99	40.973	Pygocentrus_nattereri
ENSANAG00000024617	URB1	99	75.604	ENSRNOG00000002080	Urb1	99	75.736	Rattus_norvegicus
ENSANAG00000024617	URB1	100	93.222	ENSRBIG00000033122	URB1	100	93.222	Rhinopithecus_bieti
ENSANAG00000024617	URB1	100	93.222	ENSRROG00000040237	URB1	100	93.222	Rhinopithecus_roxellana
ENSANAG00000024617	URB1	100	95.158	ENSSBOG00000027672	URB1	100	95.158	Saimiri_boliviensis_boliviensis
ENSANAG00000024617	URB1	99	63.867	ENSSHAG00000005140	URB1	100	63.732	Sarcophilus_harrisii
ENSANAG00000024617	URB1	91	46.274	ENSSFOG00015000339	urb1	97	46.561	Scleropages_formosus
ENSANAG00000024617	URB1	99	43.991	ENSSMAG00000003782	urb1	99	44.177	Scophthalmus_maximus
ENSANAG00000024617	URB1	99	44.832	ENSSDUG00000012313	urb1	99	44.832	Seriola_dumerili
ENSANAG00000024617	URB1	99	44.817	ENSSLDG00000023179	urb1	99	44.817	Seriola_lalandi_dorsalis
ENSANAG00000024617	URB1	99	55.517	ENSSPUG00000012447	URB1	99	55.875	Sphenodon_punctatus
ENSANAG00000024617	URB1	99	44.512	ENSSPAG00000006325	urb1	99	44.722	Stegastes_partitus
ENSANAG00000024617	URB1	100	78.866	ENSSSCG00000032024	URB1	100	78.866	Sus_scrofa
ENSANAG00000024617	URB1	73	58.423	ENSTGUG00000013442	URB1	100	58.423	Taeniopygia_guttata
ENSANAG00000024617	URB1	99	44.178	ENSTRUG00000009372	urb1	99	44.332	Takifugu_rubripes
ENSANAG00000024617	URB1	99	43.114	ENSTNIG00000016277	urb1	100	43.064	Tetraodon_nigroviridis
ENSANAG00000024617	URB1	83	85.217	ENSTBEG00000010044	URB1	81	85.217	Tupaia_belangeri
ENSANAG00000024617	URB1	91	79.289	ENSTTRG00000007712	URB1	92	79.498	Tursiops_truncatus
ENSANAG00000024617	URB1	100	81.126	ENSUAMG00000012231	URB1	99	81.126	Ursus_americanus
ENSANAG00000024617	URB1	94	81.393	ENSUMAG00000017419	URB1	99	81.953	Ursus_maritimus
ENSANAG00000024617	URB1	68	87.500	ENSVPAG00000001164	URB1	68	87.500	Vicugna_pacos
ENSANAG00000024617	URB1	100	81.055	ENSVVUG00000000551	URB1	100	81.055	Vulpes_vulpes
ENSANAG00000024617	URB1	99	49.655	ENSXETG00000009895	urb1	99	50.000	Xenopus_tropicalis
ENSANAG00000024617	URB1	99	41.293	ENSXCOG00000005500	urb1	99	41.369	Xiphophorus_couchianus
ENSANAG00000024617	URB1	99	41.495	ENSXMAG00000007253	urb1	99	41.413	Xiphophorus_maculatus