EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSANAG00000024665 (Gene tree)
Gene ID
105727006
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Aotus_nancymaae
Status
putative
Strand
Plus strand
Length
31429 bases
Position
chrKZ200849.1:874038-905466
Accession
105727006
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSANAP00000013542CSDPF00313.222.1e-8415
ENSANAP00000013542CSDPF00313.222.1e-8425
ENSANAP00000013542CSDPF00313.222.1e-8435
ENSANAP00000013542CSDPF00313.222.1e-8445
ENSANAP00000013542CSDPF00313.222.1e-8455
ENSANAP00000013544CSDPF00313.227.1e-8415
ENSANAP00000013544CSDPF00313.227.1e-8425
ENSANAP00000013544CSDPF00313.227.1e-8435
ENSANAP00000013544CSDPF00313.227.1e-8445
ENSANAP00000013544CSDPF00313.227.1e-8455
ENSANAP00000013548CSDPF00313.228.9e-8415
ENSANAP00000013548CSDPF00313.228.9e-8425
ENSANAP00000013548CSDPF00313.228.9e-8435
ENSANAP00000013548CSDPF00313.228.9e-8445
ENSANAP00000013548CSDPF00313.228.9e-8455
ENSANAP00000013576CSDPF00313.221.5e-3212
ENSANAP00000013576CSDPF00313.221.5e-3222
ENSANAP00000013553CSDPF00313.221.4e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSANAT00000031369CSDE1-2012415-ENSANAP00000013542804 (aa)-A0A2K5CXV9
ENSANAT00000031380CSDE1-204309-ENSANAP00000013553102 (aa)-A0A2K5CXY2
ENSANAT00000031371CSDE1-2022836XM_012466645ENSANAP00000013544812 (aa)XP_012322068A0A2K5CXX7
ENSANAT00000031404CSDE1-205912-ENSANAP00000013576303 (aa)-A0A2K5CY18
ENSANAT00000031375CSDE1-2032836XM_012466644ENSANAP00000013548843 (aa)XP_012322067A0A2K5CXX8
Gene Model
Click here to download ENSANAG00000024665's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000024665's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSANAG00000024665CSDE19971.987ENSANAG00000028396-9471.987
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSANAG00000024665CSDE110099.645ENSG00000009307CSDE1100100.000Homo_sapiens
ENSANAG00000024665CSDE19577.532ENSAPOG00000015538csde110077.532Acanthochromis_polyacanthus
ENSANAG00000024665CSDE110097.420ENSAMEG00000017129CSDE110097.420Ailuropoda_melanoleuca
ENSANAG00000024665CSDE19276.991ENSACIG00000015175csde110076.486Amphilophus_citrinellus
ENSANAG00000024665CSDE16677.612ENSACIG00000015225-8177.612Amphilophus_citrinellus
ENSANAG00000024665CSDE19973.782ENSAOCG00000011510csde110077.662Amphiprion_ocellaris
ENSANAG00000024665CSDE19975.445ENSAPEG00000007194csde110077.662Amphiprion_percula
ENSANAG00000024665CSDE19577.703ENSATEG00000003864csde110077.273Anabas_testudineus
ENSANAG00000024665CSDE19592.047ENSAPLG00000008797CSDE110092.047Anas_platyrhynchos
ENSANAG00000024665CSDE19592.231ENSACAG00000003120CSDE110092.231Anolis_carolinensis
ENSANAG00000024665CSDE19577.627ENSACLG00000013296csde110077.243Astatotilapia_calliptera
ENSANAG00000024665CSDE19578.041ENSAMXG00000007436csde110077.043Astyanax_mexicanus
ENSANAG00000024665CSDE110098.460ENSBTAG00000000678CSDE110098.566Bos_taurus
ENSANAG00000024665CSDE1100100.000ENSCJAG00000012565CSDE1100100.000Callithrix_jacchus
ENSANAG00000024665CSDE19898.872ENSCAFG00000009618CSDE110098.872Canis_familiaris
ENSANAG00000024665CSDE19599.087ENSCAFG00020000481CSDE110099.087Canis_lupus_dingo
ENSANAG00000024665CSDE110098.341ENSCHIG00000017250CSDE110098.566Capra_hircus
ENSANAG00000024665CSDE110097.630ENSTSYG00000003747CSDE110098.864Carlito_syrichta
ENSANAG00000024665CSDE19591.228ENSCAPG00000015128CSDE110091.228Cavia_aperea
ENSANAG00000024665CSDE19593.476ENSCPOG00000040388CSDE110093.476Cavia_porcellus
ENSANAG00000024665CSDE19274.165ENSCCAG00000030878-9174.165Cebus_capucinus
ENSANAG00000024665CSDE110099.882ENSCCAG00000036794CSDE1100100.000Cebus_capucinus
ENSANAG00000024665CSDE19176.733ENSCCAG00000033677-9976.010Cebus_capucinus
ENSANAG00000024665CSDE110099.645ENSCATG00000036962CSDE110099.645Cercocebus_atys
ENSANAG00000024665CSDE19598.435ENSCLAG00000006618CSDE110098.435Chinchilla_lanigera
ENSANAG00000024665CSDE110099.645ENSCSAG00000001658CSDE110099.645Chlorocebus_sabaeus
ENSANAG00000024665CSDE110098.773ENSCHOG00000000918CSDE19198.773Choloepus_hoffmanni
ENSANAG00000024665CSDE19592.607ENSCPBG00000016547CSDE110092.607Chrysemys_picta_bellii
ENSANAG00000024665CSDE19046.296ENSCING00000014465-9642.735Ciona_intestinalis
ENSANAG00000024665CSDE19044.981ENSCSAVG00000008100-9842.131Ciona_savignyi
ENSANAG00000024665CSDE110090.099ENSCANG00000031069-10093.784Colobus_angolensis_palliatus
ENSANAG00000024665CSDE110099.526ENSCANG00000035096CSDE110099.526Colobus_angolensis_palliatus
ENSANAG00000024665CSDE19581.226ENSCGRG00001014011-10081.226Cricetulus_griseus_chok1gshd
ENSANAG00000024665CSDE19598.305ENSCGRG00001016833-10098.305Cricetulus_griseus_chok1gshd
ENSANAG00000024665CSDE19297.996ENSCGRG00000002225-10097.996Cricetulus_griseus_crigri
ENSANAG00000024665CSDE19584.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSANAG00000024665CSDE19577.288ENSCSEG00000002620csde110077.113Cynoglossus_semilaevis
ENSANAG00000024665CSDE19875.089ENSCVAG00000001344csde110076.623Cyprinodon_variegatus
ENSANAG00000024665CSDE19974.220ENSDARG00000074758csde19884.252Danio_rerio
ENSANAG00000024665CSDE16483.077ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSANAG00000024665CSDE19996.770ENSDNOG00000010287-9896.770Dasypus_novemcinctus
ENSANAG00000024665CSDE19598.054ENSDORG00000011609Csde110098.054Dipodomys_ordii
ENSANAG00000024665CSDE19247.336FBgn0263352Unr7446.976Drosophila_melanogaster
ENSANAG00000024665CSDE18890.637ENSETEG00000006280-10087.342Echinops_telfairi
ENSANAG00000024665CSDE17568.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSANAG00000024665CSDE19577.285ENSETEG00000013678-9977.285Echinops_telfairi
ENSANAG00000024665CSDE19398.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSANAG00000024665CSDE18763.670ENSEBUG00000008647csde19954.167Eptatretus_burgeri
ENSANAG00000024665CSDE110097.909ENSEASG00005006284CSDE110098.747Equus_asinus_asinus
ENSANAG00000024665CSDE110097.909ENSECAG00000020885CSDE110098.747Equus_caballus
ENSANAG00000024665CSDE19398.953ENSEEUG00000006286CSDE17498.953Erinaceus_europaeus
ENSANAG00000024665CSDE19477.397ENSELUG00000015507csde110075.679Esox_lucius
ENSANAG00000024665CSDE110098.934ENSFCAG00000029266CSDE110099.087Felis_catus
ENSANAG00000024665CSDE19591.980ENSFALG00000003407CSDE110091.980Ficedula_albicollis
ENSANAG00000024665CSDE19598.952ENSFDAG00000007882CSDE110098.952Fukomys_damarensis
ENSANAG00000024665CSDE19577.966ENSFHEG00000010799csde110076.529Fundulus_heteroclitus
ENSANAG00000024665CSDE19477.586ENSGMOG00000012731csde110076.596Gadus_morhua
ENSANAG00000024665CSDE19392.199ENSGALG00000002139CSDE19892.199Gallus_gallus
ENSANAG00000024665CSDE19578.378ENSGAFG00000005241csde19576.220Gambusia_affinis
ENSANAG00000024665CSDE19478.082ENSGACG00000004544csde110077.375Gasterosteus_aculeatus
ENSANAG00000024665CSDE110090.651ENSGAGG00000017685CSDE110092.231Gopherus_agassizii
ENSANAG00000024665CSDE110099.670ENSGGOG00000002164CSDE110099.739Gorilla_gorilla
ENSANAG00000024665CSDE19974.911ENSHBUG00000020315csde110077.243Haplochromis_burtoni
ENSANAG00000024665CSDE19589.048ENSHGLG00000003829-10089.048Heterocephalus_glaber_female
ENSANAG00000024665CSDE19582.206ENSHGLG00000019549-10082.206Heterocephalus_glaber_female
ENSANAG00000024665CSDE19589.222ENSHGLG00000008555-10089.222Heterocephalus_glaber_female
ENSANAG00000024665CSDE19585.283ENSHGLG00000007471-9885.283Heterocephalus_glaber_female
ENSANAG00000024665CSDE19479.925ENSHGLG00000000650-9979.925Heterocephalus_glaber_female
ENSANAG00000024665CSDE19289.532ENSHGLG00000010039-10089.532Heterocephalus_glaber_female
ENSANAG00000024665CSDE19493.448ENSHGLG00000009620-10089.599Heterocephalus_glaber_female
ENSANAG00000024665CSDE19289.310ENSHGLG00100006910-10089.310Heterocephalus_glaber_male
ENSANAG00000024665CSDE18983.821ENSHGLG00100004195-10083.821Heterocephalus_glaber_male
ENSANAG00000024665CSDE19584.224ENSHGLG00100012072-10084.224Heterocephalus_glaber_male
ENSANAG00000024665CSDE19484.266ENSHGLG00100007287-9882.654Heterocephalus_glaber_male
ENSANAG00000024665CSDE19598.957ENSHGLG00100019438-10098.957Heterocephalus_glaber_male
ENSANAG00000024665CSDE19580.208ENSHGLG00100001846-10080.208Heterocephalus_glaber_male
ENSANAG00000024665CSDE19281.960ENSHGLG00100004833-10081.960Heterocephalus_glaber_male
ENSANAG00000024665CSDE19484.230ENSHGLG00100002245-9984.230Heterocephalus_glaber_male
ENSANAG00000024665CSDE19875.151ENSHCOG00000004158csde110076.203Hippocampus_comes
ENSANAG00000024665CSDE19975.081ENSIPUG00000000355csde110076.783Ictalurus_punctatus
ENSANAG00000024665CSDE19580.179ENSSTOG00000030994-10080.179Ictidomys_tridecemlineatus
ENSANAG00000024665CSDE18682.258ENSSTOG00000032722-9882.258Ictidomys_tridecemlineatus
ENSANAG00000024665CSDE19598.204ENSJJAG00000019571Csde110098.204Jaculus_jaculus
ENSANAG00000024665CSDE19974.941ENSKMAG00000005685csde110076.020Kryptolebias_marmoratus
ENSANAG00000024665CSDE19577.703ENSLBEG00000014770csde110077.532Labrus_bergylta
ENSANAG00000024665CSDE19483.793ENSLACG00000018452CSDE19679.050Latimeria_chalumnae
ENSANAG00000024665CSDE110077.700ENSLOCG00000010413csde19679.828Lepisosteus_oculatus
ENSANAG00000024665CSDE19897.452ENSLAFG00000007150CSDE19897.452Loxodonta_africana
ENSANAG00000024665CSDE110099.645ENSMFAG00000003674CSDE110099.739Macaca_fascicularis
ENSANAG00000024665CSDE110099.645ENSMMUG00000001974CSDE110099.739Macaca_mulatta
ENSANAG00000024665CSDE110099.645ENSMNEG00000045247CSDE110099.645Macaca_nemestrina
ENSANAG00000024665CSDE110099.408ENSMLEG00000038673CSDE110099.408Mandrillus_leucophaeus
ENSANAG00000024665CSDE19578.182ENSMAMG00000008821csde110078.182Mastacembelus_armatus
ENSANAG00000024665CSDE19975.508ENSMZEG00005021675csde110077.243Maylandia_zebra
ENSANAG00000024665CSDE19591.797ENSMGAG00000016381CSDE110091.797Meleagris_gallopavo
ENSANAG00000024665CSDE19598.503ENSMAUG00000014031Csde110098.503Mesocricetus_auratus
ENSANAG00000024665CSDE110098.032ENSMICG00000002050CSDE110098.032Microcebus_murinus
ENSANAG00000024665CSDE19598.305ENSMOCG00000018960Csde110098.305Microtus_ochrogaster
ENSANAG00000024665CSDE19577.703ENSMMOG00000015075csde110077.532Mola_mola
ENSANAG00000024665CSDE19895.172ENSMODG00000004685CSDE110095.990Monodelphis_domestica
ENSANAG00000024665CSDE19578.041ENSMALG00000007132csde110077.662Monopterus_albus
ENSANAG00000024665CSDE19598.044MGP_CAROLIEiJ_G0025444Csde110098.675Mus_caroli
ENSANAG00000024665CSDE19598.353ENSMUSG00000068823Csde110098.675Mus_musculus
ENSANAG00000024665CSDE19598.435MGP_PahariEiJ_G0026888Csde110098.675Mus_pahari
ENSANAG00000024665CSDE19598.435MGP_SPRETEiJ_G0026394Csde110098.675Mus_spretus
ENSANAG00000024665CSDE19398.978ENSMPUG00000005753CSDE19998.978Mustela_putorius_furo
ENSANAG00000024665CSDE110097.786ENSMLUG00000005681CSDE110097.786Myotis_lucifugus
ENSANAG00000024665CSDE19598.653ENSNGAG00000021929Csde110098.653Nannospalax_galili
ENSANAG00000024665CSDE18388.889ENSNGAG00000012599-10071.047Nannospalax_galili
ENSANAG00000024665CSDE19577.627ENSNBRG00000020808csde110077.243Neolamprologus_brichardi
ENSANAG00000024665CSDE110099.526ENSNLEG00000004842CSDE110099.526Nomascus_leucogenys
ENSANAG00000024665CSDE19396.117ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSANAG00000024665CSDE19896.644ENSOPRG00000005002CSDE18893.849Ochotona_princeps
ENSANAG00000024665CSDE19598.653ENSODEG00000007383-10098.653Octodon_degus
ENSANAG00000024665CSDE19267.478ENSODEG00000005979-9867.478Octodon_degus
ENSANAG00000024665CSDE19478.007ENSONIG00000009309csde110074.969Oreochromis_niloticus
ENSANAG00000024665CSDE19291.608ENSOANG00000003346-10079.551Ornithorhynchus_anatinus
ENSANAG00000024665CSDE110097.749ENSOCUG00000016438CSDE110097.749Oryctolagus_cuniculus
ENSANAG00000024665CSDE19577.373ENSORLG00000000707csde110077.373Oryzias_latipes
ENSANAG00000024665CSDE19875.000ENSORLG00020005148csde110074.969Oryzias_latipes_hni
ENSANAG00000024665CSDE19875.000ENSORLG00015019415csde110077.373Oryzias_latipes_hsok
ENSANAG00000024665CSDE19875.510ENSOMEG00000015656csde110077.922Oryzias_melastigma
ENSANAG00000024665CSDE110098.524ENSOGAG00000012127CSDE110098.524Otolemur_garnettii
ENSANAG00000024665CSDE110098.401ENSOARG00000020034CSDE110098.401Ovis_aries
ENSANAG00000024665CSDE110099.670ENSPPAG00000025861CSDE110099.739Pan_paniscus
ENSANAG00000024665CSDE110098.934ENSPPRG00000006747CSDE110098.934Panthera_pardus
ENSANAG00000024665CSDE110098.934ENSPTIG00000015468CSDE110098.997Panthera_tigris_altaica
ENSANAG00000024665CSDE110099.670ENSPTRG00000033721CSDE110099.670Pan_troglodytes
ENSANAG00000024665CSDE110099.645ENSPANG00000018873CSDE110099.739Papio_anubis
ENSANAG00000024665CSDE19578.621ENSPKIG00000009459csde110076.983Paramormyrops_kingsleyae
ENSANAG00000024665CSDE19195.133ENSPSIG00000003823CSDE19695.133Pelodiscus_sinensis
ENSANAG00000024665CSDE19577.143ENSPMGG00000000772csde110077.143Periophthalmus_magnuspinnatus
ENSANAG00000024665CSDE19598.503ENSPEMG00000020357-10098.503Peromyscus_maniculatus_bairdii
ENSANAG00000024665CSDE110094.097ENSPCIG00000022587CSDE110096.115Phascolarctos_cinereus
ENSANAG00000024665CSDE19478.767ENSPFOG00000012664csde110075.621Poecilia_formosa
ENSANAG00000024665CSDE18568.182ENSPLAG00000004786-8968.182Poecilia_latipinna
ENSANAG00000024665CSDE19371.121ENSPLAG00000017680csde19371.121Poecilia_latipinna
ENSANAG00000024665CSDE16679.104ENSPMEG00000000768-9776.812Poecilia_mexicana
ENSANAG00000024665CSDE19371.017ENSPMEG00000005094csde19671.017Poecilia_mexicana
ENSANAG00000024665CSDE19874.496ENSPREG00000011631csde110073.709Poecilia_reticulata
ENSANAG00000024665CSDE19599.499ENSPPYG00000000996CSDE110099.499Pongo_abelii
ENSANAG00000024665CSDE110098.098ENSPCAG00000014368CSDE19698.098Procavia_capensis
ENSANAG00000024665CSDE110098.632ENSPCOG00000017893CSDE110098.957Propithecus_coquereli
ENSANAG00000024665CSDE110078.896ENSPCOG00000008223-10078.896Propithecus_coquereli
ENSANAG00000024665CSDE110092.374ENSPVAG00000008225CSDE110092.374Pteropus_vampyrus
ENSANAG00000024665CSDE19974.911ENSPNYG00000013745csde110077.243Pundamilia_nyererei
ENSANAG00000024665CSDE19974.734ENSPNAG00000001958csde110077.403Pygocentrus_nattereri
ENSANAG00000024665CSDE19598.246ENSRNOG00000061058Csde110098.246Rattus_norvegicus
ENSANAG00000024665CSDE110094.233ENSRBIG00000038966-9998.824Rhinopithecus_bieti
ENSANAG00000024665CSDE19595.964ENSRBIG00000038088-9997.926Rhinopithecus_bieti
ENSANAG00000024665CSDE110099.645ENSRROG00000043101CSDE110099.645Rhinopithecus_roxellana
ENSANAG00000024665CSDE1100100.000ENSSBOG00000035592CSDE1100100.000Saimiri_boliviensis_boliviensis
ENSANAG00000024665CSDE110093.750ENSSHAG00000009831CSDE110095.958Sarcophilus_harrisii
ENSANAG00000024665CSDE19875.329ENSSFOG00015007498csde110076.853Scleropages_formosus
ENSANAG00000024665CSDE19974.446ENSSMAG00000007203csde110078.052Scophthalmus_maximus
ENSANAG00000024665CSDE19577.532ENSSDUG00000015380csde110077.532Seriola_dumerili
ENSANAG00000024665CSDE19876.024ENSSLDG00000008819csde110077.532Seriola_lalandi_dorsalis
ENSANAG00000024665CSDE110096.560ENSSARG00000000738CSDE110096.560Sorex_araneus
ENSANAG00000024665CSDE110090.769ENSSPUG00000008714CSDE110091.980Sphenodon_punctatus
ENSANAG00000024665CSDE19975.563ENSSPAG00000000716csde110077.532Stegastes_partitus
ENSANAG00000024665CSDE110098.815ENSSSCG00000006752CSDE110099.087Sus_scrofa
ENSANAG00000024665CSDE19591.000ENSTGUG00000000972CSDE110091.000Taeniopygia_guttata
ENSANAG00000024665CSDE19576.689ENSTRUG00000007996csde110074.382Takifugu_rubripes
ENSANAG00000024665CSDE18783.721ENSTNIG00000010878csde19883.721Tetraodon_nigroviridis
ENSANAG00000024665CSDE18798.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSANAG00000024665CSDE110098.155ENSTTRG00000015583CSDE110098.155Tursiops_truncatus
ENSANAG00000024665CSDE18482.022ENSUAMG00000021782-9782.022Ursus_americanus
ENSANAG00000024665CSDE19490.000ENSUAMG00000024289-9994.525Ursus_americanus
ENSANAG00000024665CSDE19493.793ENSUAMG00000021779-10098.714Ursus_americanus
ENSANAG00000024665CSDE19691.613ENSUMAG00000009720-9891.613Ursus_maritimus
ENSANAG00000024665CSDE19299.050ENSUMAG00000011714-9999.050Ursus_maritimus
ENSANAG00000024665CSDE18482.022ENSUMAG00000011713-9782.022Ursus_maritimus
ENSANAG00000024665CSDE110098.122ENSVPAG00000000749CSDE18598.122Vicugna_pacos
ENSANAG00000024665CSDE19293.706ENSVVUG00000009890CSDE19498.830Vulpes_vulpes
ENSANAG00000024665CSDE19585.768ENSXETG00000021448csde110085.768Xenopus_tropicalis
ENSANAG00000024665CSDE18885.455ENSXCOG00000000035csde19678.378Xiphophorus_couchianus
ENSANAG00000024665CSDE19975.503ENSXMAG00000009080csde19877.454Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us