EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000024800 (Gene tree)
Gene ID: 105728660
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 32279 bases
Position: chrKZ202524.1:14428095-14460373
Accession: 105728660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000013787	zf-C2H2	PF00096.26	6.6e-19	1	2
ENSANAP00000013787	zf-C2H2	PF00096.26	6.6e-19	2	2
ENSANAP00000013787	zf-met	PF12874.7	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000031615	PRDM4-201	4621	XM_012469160	ENSANAP00000013787	800 (aa)	XP_012324583	A0A2K5CYK8
ENSANAT00000031617	PRDM4-202	921	-	ENSANAP00000013789	306 (aa)	-	A0A2K5CYM0

Gene Model

Click here to download ENSANAG00000024800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000024800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000024800	PRDM4	100	99.126	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSANAG00000024800	PRDM4	99	97.247	ENSAMEG00000016174	PRDM4	99	97.247	Ailuropoda_melanoleuca
ENSANAG00000024800	PRDM4	99	87.218	ENSAPLG00000009846	PRDM4	99	86.591	Anas_platyrhynchos
ENSANAG00000024800	PRDM4	100	96.879	ENSBTAG00000012999	PRDM4	100	96.879	Bos_taurus
ENSANAG00000024800	PRDM4	100	98.876	ENSCJAG00000015261	PRDM4	100	98.876	Callithrix_jacchus
ENSANAG00000024800	PRDM4	100	97.253	ENSCAFG00000001788	PRDM4	100	97.253	Canis_familiaris
ENSANAG00000024800	PRDM4	100	97.253	ENSCAFG00020004916	PRDM4	100	97.253	Canis_lupus_dingo
ENSANAG00000024800	PRDM4	100	96.754	ENSCHIG00000019409	PRDM4	100	96.754	Capra_hircus
ENSANAG00000024800	PRDM4	100	97.878	ENSTSYG00000009248	PRDM4	100	97.878	Carlito_syrichta
ENSANAG00000024800	PRDM4	99	89.737	ENSCAPG00000013937	PRDM4	99	90.738	Cavia_aperea
ENSANAG00000024800	PRDM4	99	89.193	ENSCPOG00000022385	PRDM4	100	90.186	Cavia_porcellus
ENSANAG00000024800	PRDM4	100	99.750	ENSCCAG00000036033	PRDM4	100	99.750	Cebus_capucinus
ENSANAG00000024800	PRDM4	100	98.752	ENSCATG00000044797	PRDM4	100	98.752	Cercocebus_atys
ENSANAG00000024800	PRDM4	99	92.653	ENSCLAG00000007545	PRDM4	100	93.035	Chinchilla_lanigera
ENSANAG00000024800	PRDM4	100	99.001	ENSCSAG00000002896	PRDM4	100	99.001	Chlorocebus_sabaeus
ENSANAG00000024800	PRDM4	76	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSANAG00000024800	PRDM4	99	87.453	ENSCPBG00000023187	PRDM4	100	87.829	Chrysemys_picta_bellii
ENSANAG00000024800	PRDM4	100	98.876	ENSCANG00000021804	PRDM4	100	98.876	Colobus_angolensis_palliatus
ENSANAG00000024800	PRDM4	99	93.035	ENSCGRG00001015102	-	100	92.662	Cricetulus_griseus_chok1gshd
ENSANAG00000024800	PRDM4	96	93.032	ENSCGRG00000004044	-	100	92.645	Cricetulus_griseus_crigri
ENSANAG00000024800	PRDM4	100	96.380	ENSDNOG00000032478	PRDM4	100	96.418	Dasypus_novemcinctus
ENSANAG00000024800	PRDM4	99	82.058	ENSDORG00000015081	-	100	81.807	Dipodomys_ordii
ENSANAG00000024800	PRDM4	93	46.067	ENSEBUG00000003775	prdm4	99	46.186	Eptatretus_burgeri
ENSANAG00000024800	PRDM4	100	97.253	ENSECAG00000015423	PRDM4	100	97.253	Equus_caballus
ENSANAG00000024800	PRDM4	94	92.277	ENSEEUG00000006569	PRDM4	99	92.810	Erinaceus_europaeus
ENSANAG00000024800	PRDM4	99	60.146	ENSELUG00000015265	prdm4	93	62.468	Esox_lucius
ENSANAG00000024800	PRDM4	100	97.753	ENSFCAG00000022478	PRDM4	100	97.753	Felis_catus
ENSANAG00000024800	PRDM4	99	87.453	ENSFALG00000013342	PRDM4	100	86.951	Ficedula_albicollis
ENSANAG00000024800	PRDM4	100	86.800	ENSGALG00000012619	PRDM4	100	86.177	Gallus_gallus
ENSANAG00000024800	PRDM4	99	87.093	ENSGAGG00000002763	PRDM4	95	87.469	Gopherus_agassizii
ENSANAG00000024800	PRDM4	99	99.000	ENSGGOG00000001244	PRDM4	99	99.000	Gorilla_gorilla
ENSANAG00000024800	PRDM4	99	93.726	ENSHGLG00000004590	PRDM4	98	93.476	Heterocephalus_glaber_female
ENSANAG00000024800	PRDM4	99	92.671	ENSHGLG00100007464	PRDM4	100	92.422	Heterocephalus_glaber_male
ENSANAG00000024800	PRDM4	95	61.089	ENSIPUG00000024162	prdm4	93	61.438	Ictalurus_punctatus
ENSANAG00000024800	PRDM4	100	96.629	ENSSTOG00000016168	PRDM4	100	96.629	Ictidomys_tridecemlineatus
ENSANAG00000024800	PRDM4	82	93.817	ENSJJAG00000022448	-	95	93.817	Jaculus_jaculus
ENSANAG00000024800	PRDM4	99	72.525	ENSLACG00000007452	PRDM4	99	72.772	Latimeria_chalumnae
ENSANAG00000024800	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	53.043	Lepisosteus_oculatus
ENSANAG00000024800	PRDM4	98	96.827	ENSLAFG00000001483	PRDM4	100	96.827	Loxodonta_africana
ENSANAG00000024800	PRDM4	100	99.126	ENSMFAG00000041862	PRDM4	100	99.126	Macaca_fascicularis
ENSANAG00000024800	PRDM4	100	99.126	ENSMMUG00000015550	PRDM4	100	99.126	Macaca_mulatta
ENSANAG00000024800	PRDM4	100	98.876	ENSMNEG00000032319	PRDM4	100	98.876	Macaca_nemestrina
ENSANAG00000024800	PRDM4	100	99.001	ENSMLEG00000039607	PRDM4	100	99.001	Mandrillus_leucophaeus
ENSANAG00000024800	PRDM4	99	79.500	ENSMGAG00000012815	PRDM4	100	78.875	Meleagris_gallopavo
ENSANAG00000024800	PRDM4	100	96.629	ENSMICG00000007807	PRDM4	100	96.629	Microcebus_murinus
ENSANAG00000024800	PRDM4	99	92.982	ENSMOCG00000000753	Prdm4	99	93.609	Microtus_ochrogaster
ENSANAG00000024800	PRDM4	99	93.350	ENSMUSG00000035529	Prdm4	100	94.103	Mus_musculus
ENSANAG00000024800	PRDM4	99	93.726	MGP_PahariEiJ_G0031398	Prdm4	100	93.774	Mus_pahari
ENSANAG00000024800	PRDM4	99	93.977	MGP_SPRETEiJ_G0016505	Prdm4	100	95.044	Mus_spretus
ENSANAG00000024800	PRDM4	99	91.147	ENSMPUG00000012238	PRDM4	99	91.147	Mustela_putorius_furo
ENSANAG00000024800	PRDM4	99	96.992	ENSMLUG00000000767	PRDM4	99	96.992	Myotis_lucifugus
ENSANAG00000024800	PRDM4	99	94.228	ENSNGAG00000018627	Prdm4	100	95.609	Nannospalax_galili
ENSANAG00000024800	PRDM4	100	99.001	ENSNLEG00000006748	PRDM4	100	99.001	Nomascus_leucogenys
ENSANAG00000024800	PRDM4	89	88.498	ENSMEUG00000004495	PRDM4	89	88.498	Notamacropus_eugenii
ENSANAG00000024800	PRDM4	88	94.643	ENSOPRG00000010192	PRDM4	89	94.643	Ochotona_princeps
ENSANAG00000024800	PRDM4	99	90.738	ENSODEG00000014750	PRDM4	99	90.625	Octodon_degus
ENSANAG00000024800	PRDM4	100	90.512	ENSOANG00000005526	PRDM4	100	90.512	Ornithorhynchus_anatinus
ENSANAG00000024800	PRDM4	93	96.710	ENSOCUG00000012859	PRDM4	96	96.710	Oryctolagus_cuniculus
ENSANAG00000024800	PRDM4	99	97.867	ENSOGAG00000011945	PRDM4	100	97.867	Otolemur_garnettii
ENSANAG00000024800	PRDM4	100	96.504	ENSOARG00000017955	PRDM4	100	96.504	Ovis_aries
ENSANAG00000024800	PRDM4	100	99.126	ENSPPAG00000038438	PRDM4	100	99.126	Pan_paniscus
ENSANAG00000024800	PRDM4	100	97.753	ENSPPRG00000004144	PRDM4	100	97.753	Panthera_pardus
ENSANAG00000024800	PRDM4	100	97.753	ENSPTIG00000005847	PRDM4	100	97.753	Panthera_tigris_altaica
ENSANAG00000024800	PRDM4	100	99.376	ENSPTRG00000005400	PRDM4	100	99.376	Pan_troglodytes
ENSANAG00000024800	PRDM4	100	99.126	ENSPANG00000022084	PRDM4	100	99.126	Papio_anubis
ENSANAG00000024800	PRDM4	99	59.691	ENSPKIG00000000875	prdm4	99	60.404	Paramormyrops_kingsleyae
ENSANAG00000024800	PRDM4	91	81.559	ENSPSIG00000012066	PRDM4	100	81.559	Pelodiscus_sinensis
ENSANAG00000024800	PRDM4	99	95.483	ENSPEMG00000014598	Prdm4	100	95.483	Peromyscus_maniculatus_bairdii
ENSANAG00000024800	PRDM4	100	88.930	ENSPCIG00000009471	PRDM4	100	88.930	Phascolarctos_cinereus
ENSANAG00000024800	PRDM4	100	99.001	ENSPPYG00000004913	PRDM4	100	99.001	Pongo_abelii
ENSANAG00000024800	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSANAG00000024800	PRDM4	100	96.629	ENSPCOG00000021060	PRDM4	100	96.629	Propithecus_coquereli
ENSANAG00000024800	PRDM4	100	96.380	ENSPVAG00000001596	PRDM4	100	96.380	Pteropus_vampyrus
ENSANAG00000024800	PRDM4	99	92.857	ENSRNOG00000004962	Prdm4	100	93.609	Rattus_norvegicus
ENSANAG00000024800	PRDM4	100	98.876	ENSRBIG00000035488	PRDM4	100	98.876	Rhinopithecus_bieti
ENSANAG00000024800	PRDM4	100	99.001	ENSRROG00000012779	PRDM4	100	99.001	Rhinopithecus_roxellana
ENSANAG00000024800	PRDM4	100	99.376	ENSSBOG00000000403	PRDM4	100	99.376	Saimiri_boliviensis_boliviensis
ENSANAG00000024800	PRDM4	99	63.625	ENSSFOG00015023358	prdm4	99	63.625	Scleropages_formosus
ENSANAG00000024800	PRDM4	100	97.004	ENSSSCG00000000160	PRDM4	100	97.004	Sus_scrofa
ENSANAG00000024800	PRDM4	99	87.594	ENSTGUG00000010962	-	99	87.093	Taeniopygia_guttata
ENSANAG00000024800	PRDM4	73	89.761	ENSTBEG00000001732	PRDM4	84	89.761	Tupaia_belangeri
ENSANAG00000024800	PRDM4	100	96.629	ENSTTRG00000011056	PRDM4	100	96.629	Tursiops_truncatus
ENSANAG00000024800	PRDM4	100	97.628	ENSUAMG00000022796	PRDM4	100	97.628	Ursus_americanus
ENSANAG00000024800	PRDM4	100	97.628	ENSUMAG00000017231	PRDM4	100	97.628	Ursus_maritimus
ENSANAG00000024800	PRDM4	99	97.491	ENSVPAG00000002215	PRDM4	100	97.491	Vicugna_pacos
ENSANAG00000024800	PRDM4	100	97.253	ENSVVUG00000023397	PRDM4	100	97.253	Vulpes_vulpes