EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSANAG00000025079 (Gene tree)
Gene ID
105708012
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Aotus_nancymaae
Status
putative
Strand
Minus strand
Length
13219 bases
Position
chrKZ200510.1:666645-679863
Accession
105708012
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSANAP00000014502PABPPF00658.182.3e-3111
ENSANAP00000014500PABPPF00658.182.6e-3111
ENSANAP00000014504PABPPF00658.182.7e-3111
ENSANAP00000014502RRM_5PF13893.68.3e-0911
ENSANAP00000014500RRM_5PF13893.61.1e-0811
ENSANAP00000014502RRM_1PF00076.226.9e-9214
ENSANAP00000014502RRM_1PF00076.226.9e-9224
ENSANAP00000014502RRM_1PF00076.226.9e-9234
ENSANAP00000014502RRM_1PF00076.226.9e-9244
ENSANAP00000014500RRM_1PF00076.228.8e-9214
ENSANAP00000014500RRM_1PF00076.228.8e-9224
ENSANAP00000014500RRM_1PF00076.228.8e-9234
ENSANAP00000014500RRM_1PF00076.228.8e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSANAT00000032338PABPC4-203789-ENSANAP00000014504262 (aa)-A0A2K5D0M7
ENSANAT00000032336PABPC4-2021896XM_012439124ENSANAP00000014502631 (aa)XP_012294547A0A2K5D0N7
ENSANAT00000032334PABPC4-2011983XM_012439120ENSANAP00000014500660 (aa)XP_012294543A0A2K5D0L6
Gene Model
Click here to download ENSANAG00000025079's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000025079's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSANAG00000025079PABPC45833.333ENSANAG00000027297-9333.333
ENSANAG00000025079PABPC49958.549ENSANAG00000036324-9959.852
ENSANAG00000025079PABPC45877.041ENSANAG00000019431-9877.041
ENSANAG00000025079PABPC45334.568ENSANAG00000028883-9336.000
ENSANAG00000025079PABPC49975.158ENSANAG00000027730-9875.000
ENSANAG00000025079PABPC46173.514ENSANAG00000017199PABPC4L8773.514
ENSANAG00000025079PABPC45931.579ENSANAG00000032553ELAVL28734.940
ENSANAG00000025079PABPC49960.952ENSANAG00000035841-9960.952
ENSANAG00000025079PABPC45877.041ENSANAG00000019429-9877.041
ENSANAG00000025079PABPC49963.507ENSANAG00000026678-10063.622
ENSANAG00000025079PABPC45832.099ENSANAG00000030598ELAVL48730.921
ENSANAG00000025079PABPC45837.500ENSANAG00000024646CELF25937.500
ENSANAG00000025079PABPC45833.117ENSANAG00000037170-9533.117
ENSANAG00000025079PABPC45730.220ENSANAG00000034445TIAL17430.220
ENSANAG00000025079PABPC45730.189ENSANAG00000026081TIA18530.189
ENSANAG00000025079PABPC49766.935ENSANAG00000026826PABPC1L9966.935
ENSANAG00000025079PABPC49978.471ENSANAG00000033352-9978.315
ENSANAG00000025079PABPC48865.133ENSANAG00000019222-9769.690
ENSANAG00000025079PABPC45430.864ENSANAG00000017086HNRNPA05031.788
ENSANAG00000025079PABPC45830.263ENSANAG00000031135-9530.263
ENSANAG00000025079PABPC46067.135ENSANAG00000005063PABPC59666.942
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSANAG00000025079PABPC410099.848ENSG00000090621PABPC4100100.000Homo_sapiens
ENSANAG00000025079PABPC49983.201ENSAPOG00000001161pabpc410082.298Acanthochromis_polyacanthus
ENSANAG00000025079PABPC410098.788ENSAMEG00000011535-10098.788Ailuropoda_melanoleuca
ENSANAG00000025079PABPC49857.395ENSAMEG00000015083-9957.074Ailuropoda_melanoleuca
ENSANAG00000025079PABPC410083.438ENSACIG00000023343pabpc410084.062Amphilophus_citrinellus
ENSANAG00000025079PABPC49983.360ENSAOCG00000021529pabpc410090.583Amphiprion_ocellaris
ENSANAG00000025079PABPC49983.360ENSAPEG00000019196pabpc410083.594Amphiprion_percula
ENSANAG00000025079PABPC49982.622ENSATEG00000007402pabpc410082.426Anabas_testudineus
ENSANAG00000025079PABPC49991.429ENSAPLG00000009729-10091.429Anas_platyrhynchos
ENSANAG00000025079PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSANAG00000025079PABPC410082.969ENSACLG00000019558pabpc410083.048Astatotilapia_calliptera
ENSANAG00000025079PABPC49978.922ENSAMXG00000018779pabpc49979.556Astyanax_mexicanus
ENSANAG00000025079PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSANAG00000025079PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSANAG00000025079PABPC410099.545ENSCJAG00000002512-10099.545Callithrix_jacchus
ENSANAG00000025079PABPC47790.164ENSCJAG00000045953-9290.123Callithrix_jacchus
ENSANAG00000025079PABPC410099.049ENSCAFG00000003081PABPC410099.049Canis_familiaris
ENSANAG00000025079PABPC410098.939ENSCAFG00020004161PABPC410098.939Canis_lupus_dingo
ENSANAG00000025079PABPC410076.667ENSCHIG00000023385-10076.667Capra_hircus
ENSANAG00000025079PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSANAG00000025079PABPC410099.242ENSTSYG00000006532PABPC410099.242Carlito_syrichta
ENSANAG00000025079PABPC49999.544ENSCAPG00000015984PABPC410099.544Cavia_aperea
ENSANAG00000025079PABPC410099.545ENSCPOG00000009552PABPC410099.545Cavia_porcellus
ENSANAG00000025079PABPC410099.697ENSCCAG00000037306PABPC410099.697Cebus_capucinus
ENSANAG00000025079PABPC410099.697ENSCATG00000042164PABPC410099.697Cercocebus_atys
ENSANAG00000025079PABPC410098.939ENSCLAG00000011899PABPC410098.939Chinchilla_lanigera
ENSANAG00000025079PABPC410099.697ENSCSAG00000001135PABPC410099.697Chlorocebus_sabaeus
ENSANAG00000025079PABPC48697.098ENSCHOG00000005327PABPC48197.098Choloepus_hoffmanni
ENSANAG00000025079PABPC49991.746ENSCPBG00000001038PABPC410091.746Chrysemys_picta_bellii
ENSANAG00000025079PABPC49999.539ENSCANG00000034177PABPC410099.539Colobus_angolensis_palliatus
ENSANAG00000025079PABPC410097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSANAG00000025079PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSANAG00000025079PABPC410082.344ENSCSEG00000000130pabpc410082.426Cynoglossus_semilaevis
ENSANAG00000025079PABPC49983.466ENSCVAG00000019246pabpc410083.703Cyprinodon_variegatus
ENSANAG00000025079PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSANAG00000025079PABPC47664.000ENSDNOG00000046918-10064.000Dasypus_novemcinctus
ENSANAG00000025079PABPC47764.179ENSDNOG00000042887-10064.179Dasypus_novemcinctus
ENSANAG00000025079PABPC49999.286ENSDNOG00000018444-10099.286Dasypus_novemcinctus
ENSANAG00000025079PABPC410097.121ENSDORG00000011581Pabpc410097.121Dipodomys_ordii
ENSANAG00000025079PABPC48665.185ENSETEG00000009172-9965.201Echinops_telfairi
ENSANAG00000025079PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSANAG00000025079PABPC49776.898ENSEBUG00000013782pabpc49976.108Eptatretus_burgeri
ENSANAG00000025079PABPC49976.582ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSANAG00000025079PABPC410099.394ENSEASG00005014119PABPC410099.394Equus_asinus_asinus
ENSANAG00000025079PABPC410099.394ENSECAG00000009396PABPC410099.394Equus_caballus
ENSANAG00000025079PABPC410096.061ENSEEUG00000002962PABPC410096.061Erinaceus_europaeus
ENSANAG00000025079PABPC49983.439ENSELUG00000003195pabpc49884.019Esox_lucius
ENSANAG00000025079PABPC410099.091ENSFCAG00000015254-10099.091Felis_catus
ENSANAG00000025079PABPC49990.952ENSFALG00000000543PABPC410090.952Ficedula_albicollis
ENSANAG00000025079PABPC410099.242ENSFDAG00000020016-10099.242Fukomys_damarensis
ENSANAG00000025079PABPC49566.935ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSANAG00000025079PABPC410083.255ENSFHEG00000007548pabpc49688.571Fundulus_heteroclitus
ENSANAG00000025079PABPC49982.808ENSGMOG00000019025pabpc49983.438Gadus_morhua
ENSANAG00000025079PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSANAG00000025079PABPC49990.330ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSANAG00000025079PABPC410081.435ENSGACG00000007179pabpc410082.059Gasterosteus_aculeatus
ENSANAG00000025079PABPC49991.587ENSGAGG00000001888PABPC410091.587Gopherus_agassizii
ENSANAG00000025079PABPC410099.848ENSGGOG00000004002PABPC410099.848Gorilla_gorilla
ENSANAG00000025079PABPC47684.500ENSGGOG00000039139-9284.500Gorilla_gorilla
ENSANAG00000025079PABPC410083.125ENSHBUG00000020206pabpc410083.204Haplochromis_burtoni
ENSANAG00000025079PABPC410099.394ENSHGLG00000011162PABPC410099.394Heterocephalus_glaber_female
ENSANAG00000025079PABPC410099.366ENSHGLG00100001580PABPC410099.366Heterocephalus_glaber_male
ENSANAG00000025079PABPC410082.316ENSHCOG00000012694pabpc410082.942Hippocampus_comes
ENSANAG00000025079PABPC49883.146ENSIPUG00000016620pabpc49983.176Ictalurus_punctatus
ENSANAG00000025079PABPC410096.818ENSSTOG00000010416PABPC410096.818Ictidomys_tridecemlineatus
ENSANAG00000025079PABPC410094.545ENSJJAG00000007781Pabpc410094.545Jaculus_jaculus
ENSANAG00000025079PABPC49982.677ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSANAG00000025079PABPC410082.582ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSANAG00000025079PABPC49988.013ENSLACG00000011907PABPC410088.013Latimeria_chalumnae
ENSANAG00000025079PABPC49985.354ENSLOCG00000001877pabpc49986.142Lepisosteus_oculatus
ENSANAG00000025079PABPC410098.939ENSLAFG00000000151PABPC410098.939Loxodonta_africana
ENSANAG00000025079PABPC410099.697ENSMFAG00000041481PABPC410099.697Macaca_fascicularis
ENSANAG00000025079PABPC410099.697ENSMMUG00000007497PABPC410099.697Macaca_mulatta
ENSANAG00000025079PABPC410099.545ENSMNEG00000043054PABPC410099.545Macaca_nemestrina
ENSANAG00000025079PABPC410099.697ENSMLEG00000040716PABPC410099.697Mandrillus_leucophaeus
ENSANAG00000025079PABPC49983.201ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSANAG00000025079PABPC410082.812ENSMZEG00005006141pabpc410082.893Maylandia_zebra
ENSANAG00000025079PABPC49987.905ENSMGAG00000005408PABPC410087.905Meleagris_gallopavo
ENSANAG00000025079PABPC476100.000ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSANAG00000025079PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSANAG00000025079PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSANAG00000025079PABPC49984.369ENSMICG00000036729-10085.080Microcebus_murinus
ENSANAG00000025079PABPC48996.263ENSMICG00000016633-10096.263Microcebus_murinus
ENSANAG00000025079PABPC410097.892ENSMOCG00000006763Pabpc410097.892Microtus_ochrogaster
ENSANAG00000025079PABPC410080.346ENSMMOG00000002363pabpc49979.507Mola_mola
ENSANAG00000025079PABPC45973.729ENSMODG00000018051-9173.729Monodelphis_domestica
ENSANAG00000025079PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSANAG00000025079PABPC49982.780ENSMALG00000011017pabpc410082.326Monopterus_albus
ENSANAG00000025079PABPC410097.576MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSANAG00000025079PABPC49983.898MGP_CAROLIEiJ_G0024864-10083.898Mus_caroli
ENSANAG00000025079PABPC410098.030ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSANAG00000025079PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSANAG00000025079PABPC49497.967MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSANAG00000025079PABPC410099.091ENSMPUG00000014414-10099.091Mustela_putorius_furo
ENSANAG00000025079PABPC49553.477ENSMPUG00000006836-10053.311Mustela_putorius_furo
ENSANAG00000025079PABPC410096.513ENSMLUG00000012068PABPC410096.513Myotis_lucifugus
ENSANAG00000025079PABPC410096.970ENSNGAG00000018292Pabpc410096.970Nannospalax_galili
ENSANAG00000025079PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSANAG00000025079PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSANAG00000025079PABPC410099.683ENSNLEG00000011928PABPC410099.683Nomascus_leucogenys
ENSANAG00000025079PABPC48598.526ENSOPRG00000011984PABPC48798.526Ochotona_princeps
ENSANAG00000025079PABPC48883.478ENSODEG00000013825-10083.478Octodon_degus
ENSANAG00000025079PABPC410098.333ENSODEG00000006592-10098.333Octodon_degus
ENSANAG00000025079PABPC49989.117ENSODEG00000017434-10089.002Octodon_degus
ENSANAG00000025079PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSANAG00000025079PABPC410083.125ENSONIG00000008176pabpc410083.750Oreochromis_niloticus
ENSANAG00000025079PABPC49991.270ENSOANG00000010001PABPC410091.270Ornithorhynchus_anatinus
ENSANAG00000025079PABPC49699.051ENSOCUG00000000562PABPC48899.051Oryctolagus_cuniculus
ENSANAG00000025079PABPC49990.741ENSORLG00000017479pabpc49990.741Oryzias_latipes
ENSANAG00000025079PABPC49990.741ENSORLG00020018644pabpc49990.741Oryzias_latipes_hni
ENSANAG00000025079PABPC49990.741ENSORLG00015015042pabpc49990.741Oryzias_latipes_hsok
ENSANAG00000025079PABPC49983.043ENSOMEG00000014410pabpc49983.491Oryzias_melastigma
ENSANAG00000025079PABPC410096.682ENSOGAG00000004067PABPC410096.682Otolemur_garnettii
ENSANAG00000025079PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSANAG00000025079PABPC410099.848ENSPPAG00000043625PABPC410099.848Pan_paniscus
ENSANAG00000025079PABPC410099.091ENSPPRG00000024727PABPC410099.091Panthera_pardus
ENSANAG00000025079PABPC410099.091ENSPTIG00000005829PABPC410099.091Panthera_tigris_altaica
ENSANAG00000025079PABPC410099.848ENSPTRG00000000573PABPC410099.848Pan_troglodytes
ENSANAG00000025079PABPC410099.545ENSPANG00000009484PABPC410099.545Papio_anubis
ENSANAG00000025079PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSANAG00000025079PABPC49991.746ENSPSIG00000016892PABPC410091.746Pelodiscus_sinensis
ENSANAG00000025079PABPC410081.575ENSPMGG00000009073pabpc49981.319Periophthalmus_magnuspinnatus
ENSANAG00000025079PABPC410091.061ENSPEMG00000024193-9991.061Peromyscus_maniculatus_bairdii
ENSANAG00000025079PABPC410097.424ENSPEMG00000023569-9997.424Peromyscus_maniculatus_bairdii
ENSANAG00000025079PABPC48973.484ENSPMAG00000002836pabpc410073.196Petromyzon_marinus
ENSANAG00000025079PABPC49571.311ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSANAG00000025079PABPC49793.795ENSPCIG00000020674PABPC410093.571Phascolarctos_cinereus
ENSANAG00000025079PABPC410082.629ENSPFOG00000002682pabpc410082.764Poecilia_formosa
ENSANAG00000025079PABPC410082.473ENSPLAG00000010112pabpc410083.178Poecilia_latipinna
ENSANAG00000025079PABPC49983.148ENSPMEG00000019739pabpc410082.919Poecilia_mexicana
ENSANAG00000025079PABPC410083.220ENSPREG00000001589pabpc410083.220Poecilia_reticulata
ENSANAG00000025079PABPC410099.848ENSPPYG00000001506PABPC410099.848Pongo_abelii
ENSANAG00000025079PABPC410094.091ENSPCAG00000003341PABPC410094.091Procavia_capensis
ENSANAG00000025079PABPC49982.003ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSANAG00000025079PABPC410099.395ENSPCOG00000023725-10099.395Propithecus_coquereli
ENSANAG00000025079PABPC49998.487ENSPVAG00000002187PABPC410098.487Pteropus_vampyrus
ENSANAG00000025079PABPC410082.969ENSPNYG00000006134pabpc410083.048Pundamilia_nyererei
ENSANAG00000025079PABPC410083.412ENSPNAG00000024355pabpc410084.038Pygocentrus_nattereri
ENSANAG00000025079PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSANAG00000025079PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSANAG00000025079PABPC410099.697ENSRBIG00000039761PABPC410099.697Rhinopithecus_bieti
ENSANAG00000025079PABPC410099.697ENSRROG00000033355PABPC410099.697Rhinopithecus_roxellana
ENSANAG00000025079PABPC410099.545ENSSBOG00000026193PABPC410099.545Saimiri_boliviensis_boliviensis
ENSANAG00000025079PABPC49892.557ENSSHAG00000018139PABPC410092.063Sarcophilus_harrisii
ENSANAG00000025079PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSANAG00000025079PABPC49982.437ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSANAG00000025079PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSANAG00000025079PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSANAG00000025079PABPC49597.189ENSSARG00000000310PABPC410091.818Sorex_araneus
ENSANAG00000025079PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSANAG00000025079PABPC49990.562ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSANAG00000025079PABPC49547.809ENSSSCG00000036170-9650.168Sus_scrofa
ENSANAG00000025079PABPC410099.242ENSSSCG00000003660-10099.242Sus_scrofa
ENSANAG00000025079PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSANAG00000025079PABPC410082.075ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSANAG00000025079PABPC410078.213ENSTNIG00000016902pabpc49978.213Tetraodon_nigroviridis
ENSANAG00000025079PABPC49597.590ENSTBEG00000009035PABPC410088.403Tupaia_belangeri
ENSANAG00000025079PABPC49597.590ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSANAG00000025079PABPC410098.891ENSUAMG00000000303PABPC410098.891Ursus_americanus
ENSANAG00000025079PABPC410098.788ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSANAG00000025079PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSANAG00000025079PABPC410099.049ENSVVUG00000005215PABPC410099.049Vulpes_vulpes
ENSANAG00000025079PABPC49983.333ENSXETG00000010946pabpc410083.333Xenopus_tropicalis
ENSANAG00000025079PABPC45997.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSANAG00000025079PABPC49989.091ENSXCOG00000013190pabpc49689.623Xiphophorus_couchianus
ENSANAG00000025079PABPC410082.786ENSXMAG00000019007pabpc410083.022Xiphophorus_maculatus

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