EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000025390 (Gene tree)
Gene ID: 105711350
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 27757 bases
Position: chrKZ201564.1:835478-863234
Accession: 105711350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000015008	MMR_HSR1	PF01926.23	0.00016	1	1
ENSANAP00000015015	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000032844	RAB5C-201	2135	-	ENSANAP00000015008	204 (aa)	-	A0A2K5D239
ENSANAT00000032855	RAB5C-203	723	XM_012444083	ENSANAP00000015018	240 (aa)	XP_012299506	A0A2K5D247
ENSANAT00000032851	RAB5C-202	2060	-	ENSANAP00000015015	204 (aa)	-	A0A2K5D239

Gene Model

Click here to download ENSANAG00000025390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000025390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000025390	RAB5C	81	32.934	ENSANAG00000030296	KRAS	85	33.129
ENSANAG00000025390	RAB5C	86	51.429	ENSANAG00000034725	RAB22A	90	51.429
ENSANAG00000025390	RAB5C	82	42.442	ENSANAG00000029692	RAB7A	86	43.293
ENSANAG00000025390	RAB5C	84	45.029	ENSANAG00000017472	RAB6B	82	45.029
ENSANAG00000025390	RAB5C	89	39.560	ENSANAG00000030247	-	90	39.560
ENSANAG00000025390	RAB5C	79	45.963	ENSANAG00000036045	RAB25	76	45.963
ENSANAG00000025390	RAB5C	86	44.000	ENSANAG00000036364	RAB6A	84	44.000
ENSANAG00000025390	RAB5C	79	40.361	ENSANAG00000027971	RAB33A	70	40.361
ENSANAG00000025390	RAB5C	83	40.000	ENSANAG00000036954	RAB35	84	40.000
ENSANAG00000025390	RAB5C	82	36.047	ENSANAG00000031345	RAB9B	85	36.047
ENSANAG00000025390	RAB5C	79	48.447	ENSANAG00000037616	RAB11B	88	49.682
ENSANAG00000025390	RAB5C	58	31.967	ENSANAG00000021118	ARL8B	55	30.851
ENSANAG00000025390	RAB5C	89	38.503	ENSANAG00000027700	RAB33B	81	38.503
ENSANAG00000025390	RAB5C	88	39.459	ENSANAG00000029292	RAB30	91	39.459
ENSANAG00000025390	RAB5C	79	44.720	ENSANAG00000035405	RAB2A	76	44.720
ENSANAG00000025390	RAB5C	77	31.250	ENSANAG00000023861	RAB34	61	35.185
ENSANAG00000025390	RAB5C	89	42.473	ENSANAG00000035856	RAB18	87	42.473
ENSANAG00000025390	RAB5C	85	36.416	ENSANAG00000027052	-	73	36.416
ENSANAG00000025390	RAB5C	77	35.000	ENSANAG00000025225	RAB36	54	35.000
ENSANAG00000025390	RAB5C	86	37.143	ENSANAG00000029777	RAB15	82	42.857
ENSANAG00000025390	RAB5C	82	44.311	ENSANAG00000018900	RAB2B	77	44.311
ENSANAG00000025390	RAB5C	56	40.000	ENSANAG00000021001	-	50	40.000
ENSANAG00000025390	RAB5C	86	33.702	ENSANAG00000034201	HRAS	94	33.702
ENSANAG00000025390	RAB5C	82	33.333	ENSANAG00000034086	RERG	84	33.333
ENSANAG00000025390	RAB5C	97	88.325	ENSANAG00000033215	RAB5B	87	88.325
ENSANAG00000025390	RAB5C	79	47.826	ENSANAG00000008429	RAB11A	75	47.826
ENSANAG00000025390	RAB5C	80	42.683	ENSANAG00000031127	RAB14	93	37.838
ENSANAG00000025390	RAB5C	89	43.956	ENSANAG00000020929	RAB1A	89	43.956
ENSANAG00000025390	RAB5C	86	31.250	ENSANAG00000022525	RHEB	93	31.250
ENSANAG00000025390	RAB5C	58	31.148	ENSANAG00000030745	ARL8A	62	31.148
ENSANAG00000025390	RAB5C	100	89.216	ENSANAG00000025120	RAB5A	94	89.216
ENSANAG00000025390	RAB5C	79	31.902	ENSANAG00000011222	-	91	31.902
ENSANAG00000025390	RAB5C	79	36.585	ENSANAG00000031228	RAB39B	77	36.196
ENSANAG00000025390	RAB5C	88	45.304	ENSANAG00000022585	RAB1B	90	45.304
ENSANAG00000025390	RAB5C	78	38.415	ENSANAG00000035487	-	76	38.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000025390	RAB5C	100	99.020	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSANAG00000025390	RAB5C	100	90.732	ENSAPOG00000016864	rab5c	93	93.171	Acanthochromis_polyacanthus
ENSANAG00000025390	RAB5C	100	99.020	ENSAMEG00000006003	RAB5C	94	99.020	Ailuropoda_melanoleuca
ENSANAG00000025390	RAB5C	100	90.244	ENSACIG00000010896	rab5c	93	92.195	Amphilophus_citrinellus
ENSANAG00000025390	RAB5C	100	90.732	ENSAOCG00000016614	rab5c	93	93.171	Amphiprion_ocellaris
ENSANAG00000025390	RAB5C	98	90.500	ENSAPEG00000017868	-	92	93.000	Amphiprion_percula
ENSANAG00000025390	RAB5C	100	91.707	ENSATEG00000001937	rab5c	94	93.171	Anabas_testudineus
ENSANAG00000025390	RAB5C	97	91.457	ENSACLG00000008615	-	93	90.821	Astatotilapia_calliptera
ENSANAG00000025390	RAB5C	100	89.268	ENSACLG00000002706	rab5c	93	92.195	Astatotilapia_calliptera
ENSANAG00000025390	RAB5C	100	91.262	ENSAMXG00000043717	rab5c	93	93.204	Astyanax_mexicanus
ENSANAG00000025390	RAB5C	89	96.154	ENSAMXG00000037267	-	94	92.965	Astyanax_mexicanus
ENSANAG00000025390	RAB5C	100	99.020	ENSBTAG00000006982	RAB5C	94	99.020	Bos_taurus
ENSANAG00000025390	RAB5C	90	84.783	WBGene00004268	rab-5	87	84.783	Caenorhabditis_elegans
ENSANAG00000025390	RAB5C	100	99.020	ENSCAFG00000015629	RAB5C	94	99.020	Canis_familiaris
ENSANAG00000025390	RAB5C	100	99.020	ENSCAFG00020013537	RAB5C	94	99.020	Canis_lupus_dingo
ENSANAG00000025390	RAB5C	100	99.020	ENSCHIG00000012960	RAB5C	94	99.020	Capra_hircus
ENSANAG00000025390	RAB5C	100	99.510	ENSTSYG00000030531	RAB5C	94	99.510	Carlito_syrichta
ENSANAG00000025390	RAB5C	100	100.000	ENSCCAG00000025940	RAB5C	94	100.000	Cebus_capucinus
ENSANAG00000025390	RAB5C	100	99.020	ENSCATG00000040873	RAB5C	94	99.020	Cercocebus_atys
ENSANAG00000025390	RAB5C	100	98.529	ENSCLAG00000016650	RAB5C	94	98.529	Chinchilla_lanigera
ENSANAG00000025390	RAB5C	87	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSANAG00000025390	RAB5C	99	80.693	ENSCING00000003340	-	92	80.693	Ciona_intestinalis
ENSANAG00000025390	RAB5C	100	76.667	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSANAG00000025390	RAB5C	100	98.529	ENSCGRG00001014226	Rab5c	94	98.529	Cricetulus_griseus_chok1gshd
ENSANAG00000025390	RAB5C	100	98.529	ENSCGRG00000007534	Rab5c	94	98.529	Cricetulus_griseus_crigri
ENSANAG00000025390	RAB5C	100	93.171	ENSCSEG00000017024	rab5c	93	93.171	Cynoglossus_semilaevis
ENSANAG00000025390	RAB5C	100	90.732	ENSCVAG00000009550	rab5c	93	92.683	Cyprinodon_variegatus
ENSANAG00000025390	RAB5C	100	99.020	ENSDNOG00000038853	RAB5C	94	99.020	Dasypus_novemcinctus
ENSANAG00000025390	RAB5C	100	98.529	ENSDORG00000006819	Rab5c	94	98.529	Dipodomys_ordii
ENSANAG00000025390	RAB5C	98	78.000	FBgn0014010	Rab5	91	78.000	Drosophila_melanogaster
ENSANAG00000025390	RAB5C	96	84.184	ENSEBUG00000014794	rab5c	92	84.184	Eptatretus_burgeri
ENSANAG00000025390	RAB5C	100	99.020	ENSEASG00005009281	RAB5C	94	99.020	Equus_asinus_asinus
ENSANAG00000025390	RAB5C	100	99.510	ENSECAG00000025054	RAB5C	94	99.510	Equus_caballus
ENSANAG00000025390	RAB5C	100	99.020	ENSEEUG00000002790	RAB5C	94	99.020	Erinaceus_europaeus
ENSANAG00000025390	RAB5C	100	89.756	ENSELUG00000010439	-	93	89.756	Esox_lucius
ENSANAG00000025390	RAB5C	100	90.244	ENSELUG00000018516	rab5c	94	92.683	Esox_lucius
ENSANAG00000025390	RAB5C	100	99.020	ENSFCAG00000002148	RAB5C	94	99.020	Felis_catus
ENSANAG00000025390	RAB5C	100	96.569	ENSFDAG00000021541	RAB5C	94	96.569	Fukomys_damarensis
ENSANAG00000025390	RAB5C	100	92.233	ENSFHEG00000015268	-	94	92.233	Fundulus_heteroclitus
ENSANAG00000025390	RAB5C	100	90.732	ENSFHEG00000012117	rab5c	93	92.683	Fundulus_heteroclitus
ENSANAG00000025390	RAB5C	100	89.268	ENSGMOG00000015096	rab5c	93	92.195	Gadus_morhua
ENSANAG00000025390	RAB5C	84	86.628	ENSGMOG00000001876	-	99	86.628	Gadus_morhua
ENSANAG00000025390	RAB5C	100	91.748	ENSGAFG00000003642	-	92	91.748	Gambusia_affinis
ENSANAG00000025390	RAB5C	100	91.220	ENSGAFG00000000884	rab5c	93	93.171	Gambusia_affinis
ENSANAG00000025390	RAB5C	92	94.149	ENSGACG00000008659	rab5c	90	91.457	Gasterosteus_aculeatus
ENSANAG00000025390	RAB5C	100	99.020	ENSGGOG00000005472	RAB5C	94	99.020	Gorilla_gorilla
ENSANAG00000025390	RAB5C	100	89.268	ENSHBUG00000002014	rab5c	93	92.195	Haplochromis_burtoni
ENSANAG00000025390	RAB5C	97	91.457	ENSHBUG00000006823	-	93	90.821	Haplochromis_burtoni
ENSANAG00000025390	RAB5C	100	97.059	ENSHGLG00000012067	RAB5C	94	97.059	Heterocephalus_glaber_female
ENSANAG00000025390	RAB5C	97	83.500	ENSHCOG00000020238	-	95	83.173	Hippocampus_comes
ENSANAG00000025390	RAB5C	100	91.262	ENSHCOG00000004662	rab5c	92	92.718	Hippocampus_comes
ENSANAG00000025390	RAB5C	97	89.447	ENSIPUG00000020082	rab5c	93	89.855	Ictalurus_punctatus
ENSANAG00000025390	RAB5C	100	98.039	ENSSTOG00000006620	RAB5C	94	98.039	Ictidomys_tridecemlineatus
ENSANAG00000025390	RAB5C	100	99.020	ENSJJAG00000021181	Rab5c	94	99.020	Jaculus_jaculus
ENSANAG00000025390	RAB5C	100	90.291	ENSKMAG00000017417	-	94	90.291	Kryptolebias_marmoratus
ENSANAG00000025390	RAB5C	100	90.244	ENSKMAG00000020038	rab5c	93	92.683	Kryptolebias_marmoratus
ENSANAG00000025390	RAB5C	100	89.806	ENSLBEG00000010408	-	94	89.806	Labrus_bergylta
ENSANAG00000025390	RAB5C	100	91.707	ENSLBEG00000004128	rab5c	93	93.659	Labrus_bergylta
ENSANAG00000025390	RAB5C	100	94.608	ENSLOCG00000012566	rab5c	95	94.608	Lepisosteus_oculatus
ENSANAG00000025390	RAB5C	100	99.020	ENSMFAG00000039627	RAB5C	94	99.020	Macaca_fascicularis
ENSANAG00000025390	RAB5C	100	99.020	ENSMNEG00000000355	RAB5C	94	99.020	Macaca_nemestrina
ENSANAG00000025390	RAB5C	100	89.806	ENSMAMG00000016207	-	94	89.806	Mastacembelus_armatus
ENSANAG00000025390	RAB5C	100	89.756	ENSMAMG00000022322	rab5c	93	92.195	Mastacembelus_armatus
ENSANAG00000025390	RAB5C	97	91.457	ENSMZEG00005021090	-	93	90.821	Maylandia_zebra
ENSANAG00000025390	RAB5C	100	89.268	ENSMZEG00005022735	rab5c	93	92.195	Maylandia_zebra
ENSANAG00000025390	RAB5C	100	99.510	ENSMAUG00000015005	Rab5c	94	99.510	Mesocricetus_auratus
ENSANAG00000025390	RAB5C	100	99.020	ENSMICG00000041608	RAB5C	94	99.020	Microcebus_murinus
ENSANAG00000025390	RAB5C	100	99.020	ENSMOCG00000018531	-	94	99.020	Microtus_ochrogaster
ENSANAG00000025390	RAB5C	100	92.195	ENSMMOG00000020621	rab5c	93	92.195	Mola_mola
ENSANAG00000025390	RAB5C	100	89.320	ENSMALG00000022348	-	94	89.320	Monopterus_albus
ENSANAG00000025390	RAB5C	98	85.500	ENSMALG00000006052	rab5c	91	85.294	Monopterus_albus
ENSANAG00000025390	RAB5C	100	99.020	MGP_CAROLIEiJ_G0017184	Rab5c	94	99.020	Mus_caroli
ENSANAG00000025390	RAB5C	100	99.020	ENSMUSG00000019173	Rab5c	94	99.020	Mus_musculus
ENSANAG00000025390	RAB5C	100	99.020	MGP_PahariEiJ_G0018314	Rab5c	94	99.020	Mus_pahari
ENSANAG00000025390	RAB5C	100	99.020	MGP_SPRETEiJ_G0018027	Rab5c	94	99.020	Mus_spretus
ENSANAG00000025390	RAB5C	100	99.020	ENSMPUG00000010554	RAB5C	94	99.020	Mustela_putorius_furo
ENSANAG00000025390	RAB5C	100	99.020	ENSNGAG00000010286	Rab5c	94	99.020	Nannospalax_galili
ENSANAG00000025390	RAB5C	97	91.457	ENSNBRG00000016922	-	93	90.821	Neolamprologus_brichardi
ENSANAG00000025390	RAB5C	100	90.244	ENSNBRG00000018165	rab5c	93	93.171	Neolamprologus_brichardi
ENSANAG00000025390	RAB5C	87	92.135	ENSOPRG00000008255	RAB5C	100	92.135	Ochotona_princeps
ENSANAG00000025390	RAB5C	100	98.039	ENSODEG00000017920	RAB5C	94	98.039	Octodon_degus
ENSANAG00000025390	RAB5C	100	90.244	ENSONIG00000001113	rab5c	93	93.171	Oreochromis_niloticus
ENSANAG00000025390	RAB5C	100	90.244	ENSORLG00000003882	rab5c	94	91.707	Oryzias_latipes
ENSANAG00000025390	RAB5C	100	91.220	ENSORLG00020008388	rab5c	94	91.220	Oryzias_latipes_hni
ENSANAG00000025390	RAB5C	100	90.244	ENSORLG00015021900	rab5c	94	91.707	Oryzias_latipes_hsok
ENSANAG00000025390	RAB5C	100	90.244	ENSOMEG00000023078	rab5c	94	91.707	Oryzias_melastigma
ENSANAG00000025390	RAB5C	100	99.020	ENSOGAG00000009456	RAB5C	94	99.020	Otolemur_garnettii
ENSANAG00000025390	RAB5C	100	99.020	ENSOARG00000018768	RAB5C	94	99.020	Ovis_aries
ENSANAG00000025390	RAB5C	100	99.020	ENSPPAG00000037206	RAB5C	94	99.020	Pan_paniscus
ENSANAG00000025390	RAB5C	100	99.020	ENSPPRG00000005745	RAB5C	94	99.020	Panthera_pardus
ENSANAG00000025390	RAB5C	100	99.020	ENSPTIG00000008177	RAB5C	94	99.020	Panthera_tigris_altaica
ENSANAG00000025390	RAB5C	100	99.020	ENSPTRG00000009194	RAB5C	94	99.020	Pan_troglodytes
ENSANAG00000025390	RAB5C	100	90.244	ENSPKIG00000020112	-	94	90.244	Paramormyrops_kingsleyae
ENSANAG00000025390	RAB5C	100	91.176	ENSPKIG00000001237	-	94	91.176	Paramormyrops_kingsleyae
ENSANAG00000025390	RAB5C	100	87.805	ENSPMGG00000010792	rab5c	92	92.000	Periophthalmus_magnuspinnatus
ENSANAG00000025390	RAB5C	100	99.020	ENSPEMG00000017971	Rab5c	94	99.020	Peromyscus_maniculatus_bairdii
ENSANAG00000025390	RAB5C	92	86.458	ENSPMAG00000000008	rab5c	88	86.458	Petromyzon_marinus
ENSANAG00000025390	RAB5C	94	84.896	ENSPMAG00000007867	rab5c	91	84.896	Petromyzon_marinus
ENSANAG00000025390	RAB5C	94	83.854	ENSPMAG00000001399	rab5c	91	83.854	Petromyzon_marinus
ENSANAG00000025390	RAB5C	100	98.039	ENSPCIG00000020225	-	94	98.039	Phascolarctos_cinereus
ENSANAG00000025390	RAB5C	100	91.262	ENSPLAG00000016333	-	94	91.262	Poecilia_latipinna
ENSANAG00000025390	RAB5C	100	91.220	ENSPLAG00000004790	rab5c	93	93.171	Poecilia_latipinna
ENSANAG00000025390	RAB5C	94	93.229	ENSPMEG00000012614	-	92	91.262	Poecilia_mexicana
ENSANAG00000025390	RAB5C	100	91.220	ENSPMEG00000011336	rab5c	93	93.171	Poecilia_mexicana
ENSANAG00000025390	RAB5C	100	91.220	ENSPREG00000010146	rab5c	93	93.171	Poecilia_reticulata
ENSANAG00000025390	RAB5C	92	92.063	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSANAG00000025390	RAB5C	100	99.020	ENSPPYG00000008398	RAB5C	94	99.020	Pongo_abelii
ENSANAG00000025390	RAB5C	99	99.015	ENSPCAG00000016412	RAB5C	94	99.015	Procavia_capensis
ENSANAG00000025390	RAB5C	100	98.529	ENSPCOG00000026327	RAB5C	94	98.529	Propithecus_coquereli
ENSANAG00000025390	RAB5C	100	99.510	ENSPVAG00000003867	RAB5C	94	99.510	Pteropus_vampyrus
ENSANAG00000025390	RAB5C	97	91.457	ENSPNYG00000015851	-	93	90.821	Pundamilia_nyererei
ENSANAG00000025390	RAB5C	100	89.268	ENSPNYG00000010615	rab5c	93	92.195	Pundamilia_nyererei
ENSANAG00000025390	RAB5C	89	94.505	ENSPNAG00000002218	-	93	91.457	Pygocentrus_nattereri
ENSANAG00000025390	RAB5C	100	92.718	ENSPNAG00000028138	rab5c	93	92.718	Pygocentrus_nattereri
ENSANAG00000025390	RAB5C	100	99.510	ENSRNOG00000018568	Rab5c	94	99.510	Rattus_norvegicus
ENSANAG00000025390	RAB5C	100	99.020	ENSRBIG00000031376	RAB5C	94	99.020	Rhinopithecus_bieti
ENSANAG00000025390	RAB5C	100	99.020	ENSRROG00000032895	RAB5C	94	99.020	Rhinopithecus_roxellana
ENSANAG00000025390	RAB5C	100	100.000	ENSSBOG00000032552	-	94	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000025390	RAB5C	100	98.529	ENSSHAG00000005267	-	94	98.529	Sarcophilus_harrisii
ENSANAG00000025390	RAB5C	100	89.268	ENSSFOG00015009988	-	93	89.268	Scleropages_formosus
ENSANAG00000025390	RAB5C	100	92.683	ENSSMAG00000007323	rab5c	93	92.683	Scophthalmus_maximus
ENSANAG00000025390	RAB5C	100	93.171	ENSSDUG00000023008	rab5c	93	93.171	Seriola_dumerili
ENSANAG00000025390	RAB5C	100	92.683	ENSSLDG00000017771	rab5c	93	92.683	Seriola_lalandi_dorsalis
ENSANAG00000025390	RAB5C	100	98.039	ENSSPUG00000012950	-	94	98.039	Sphenodon_punctatus
ENSANAG00000025390	RAB5C	100	91.220	ENSSPAG00000006436	rab5c	93	94.146	Stegastes_partitus
ENSANAG00000025390	RAB5C	100	99.020	ENSSSCG00000032467	RAB5C	94	99.020	Sus_scrofa
ENSANAG00000025390	RAB5C	100	89.756	ENSTRUG00000015590	rab5c	93	92.195	Takifugu_rubripes
ENSANAG00000025390	RAB5C	97	92.424	ENSTNIG00000011711	rab5c	90	92.424	Tetraodon_nigroviridis
ENSANAG00000025390	RAB5C	100	99.020	ENSTBEG00000007092	RAB5C	94	99.020	Tupaia_belangeri
ENSANAG00000025390	RAB5C	100	98.039	ENSTTRG00000006673	RAB5C	94	98.039	Tursiops_truncatus
ENSANAG00000025390	RAB5C	100	99.020	ENSUAMG00000024343	RAB5C	94	99.020	Ursus_americanus
ENSANAG00000025390	RAB5C	100	99.020	ENSUMAG00000023270	RAB5C	94	99.020	Ursus_maritimus
ENSANAG00000025390	RAB5C	100	90.732	ENSXCOG00000016788	rab5c	93	93.171	Xiphophorus_couchianus
ENSANAG00000025390	RAB5C	100	92.233	ENSXCOG00000006300	-	92	92.233	Xiphophorus_couchianus
ENSANAG00000025390	RAB5C	100	92.233	ENSXMAG00000022179	-	95	92.233	Xiphophorus_maculatus
ENSANAG00000025390	RAB5C	100	91.220	ENSXMAG00000003266	rab5c	93	93.171	Xiphophorus_maculatus