EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000025446 (Gene tree)
Gene ID: 105726893
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 24626 bases
Position: chrKZ205334.1:933421-958046
Accession: 105726893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000015159	RTC	PF01137.21	7.5e-86	1	1
ENSANAP00000015157	RTC	PF01137.21	9.6e-80	1	1
ENSANAP00000015159	RTC_insert	PF05189.13	1.3e-24	1	1
ENSANAP00000015157	RTC_insert	PF05189.13	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000032996	RTCA-202	1101	XM_012466468	ENSANAP00000015159	366 (aa)	XP_012321891	A0A2K5D2I6
ENSANAT00000032994	RTCA-201	1140	-	ENSANAP00000015157	379 (aa)	-	A0A2K5D2K9

Gene Model

Click here to download ENSANAG00000025446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000025446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000025446	RTCA	100	97.268	ENSG00000137996	RTCA	100	97.268	Homo_sapiens
ENSANAG00000025446	RTCA	99	71.745	ENSAPOG00000001345	rtca	98	71.745	Acanthochromis_polyacanthus
ENSANAG00000025446	RTCA	73	94.424	ENSAMEG00000008855	RTCA	100	94.424	Ailuropoda_melanoleuca
ENSANAG00000025446	RTCA	99	71.745	ENSACIG00000019643	rtca	99	71.745	Amphilophus_citrinellus
ENSANAG00000025446	RTCA	100	71.038	ENSAOCG00000014979	rtca	99	71.038	Amphiprion_ocellaris
ENSANAG00000025446	RTCA	100	71.038	ENSAPEG00000006945	rtca	99	71.038	Amphiprion_percula
ENSANAG00000025446	RTCA	96	71.795	ENSATEG00000006315	rtca	96	71.795	Anabas_testudineus
ENSANAG00000025446	RTCA	96	79.944	ENSAPLG00000015430	RTCA	100	79.944	Anas_platyrhynchos
ENSANAG00000025446	RTCA	99	70.914	ENSACLG00000020770	rtca	98	70.914	Astatotilapia_calliptera
ENSANAG00000025446	RTCA	100	72.951	ENSAMXG00000043271	rtca	100	72.951	Astyanax_mexicanus
ENSANAG00000025446	RTCA	100	94.536	ENSBTAG00000006321	RTCA	100	94.536	Bos_taurus
ENSANAG00000025446	RTCA	100	98.907	ENSCJAG00000003398	RTCA	100	98.907	Callithrix_jacchus
ENSANAG00000025446	RTCA	100	94.536	ENSCAFG00000020010	RTCA	68	94.536	Canis_familiaris
ENSANAG00000025446	RTCA	100	94.536	ENSCAFG00020011528	RTCA	57	94.536	Canis_lupus_dingo
ENSANAG00000025446	RTCA	100	94.262	ENSCHIG00000018937	RTCA	100	94.262	Capra_hircus
ENSANAG00000025446	RTCA	100	92.350	ENSTSYG00000011305	RTCA	100	92.350	Carlito_syrichta
ENSANAG00000025446	RTCA	100	98.153	ENSCCAG00000021844	RTCA	100	98.153	Cebus_capucinus
ENSANAG00000025446	RTCA	100	96.570	ENSCATG00000019364	RTCA	100	97.411	Cercocebus_atys
ENSANAG00000025446	RTCA	87	94.953	ENSCLAG00000006125	RTCA	100	94.953	Chinchilla_lanigera
ENSANAG00000025446	RTCA	100	97.541	ENSCSAG00000001509	RTCA	100	97.541	Chlorocebus_sabaeus
ENSANAG00000025446	RTCA	100	93.169	ENSCHOG00000005211	RTCA	100	93.169	Choloepus_hoffmanni
ENSANAG00000025446	RTCA	100	82.240	ENSCPBG00000026658	RTCA	100	82.240	Chrysemys_picta_bellii
ENSANAG00000025446	RTCA	98	55.679	ENSCING00000007875	-	98	55.679	Ciona_intestinalis
ENSANAG00000025446	RTCA	98	53.889	ENSCSAVG00000007269	-	98	53.889	Ciona_savignyi
ENSANAG00000025446	RTCA	100	97.268	ENSCANG00000040106	RTCA	100	97.268	Colobus_angolensis_palliatus
ENSANAG00000025446	RTCA	73	91.078	ENSCGRG00001013163	Rtca	85	91.078	Cricetulus_griseus_chok1gshd
ENSANAG00000025446	RTCA	98	69.444	ENSCSEG00000000530	rtca	96	69.444	Cynoglossus_semilaevis
ENSANAG00000025446	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSANAG00000025446	RTCA	100	73.224	ENSDARG00000002215	rtca	100	73.224	Danio_rerio
ENSANAG00000025446	RTCA	100	93.169	ENSDNOG00000000456	RTCA	100	93.169	Dasypus_novemcinctus
ENSANAG00000025446	RTCA	100	92.077	ENSDORG00000005448	Rtca	100	92.077	Dipodomys_ordii
ENSANAG00000025446	RTCA	98	38.268	FBgn0025630	Rtca	98	38.268	Drosophila_melanogaster
ENSANAG00000025446	RTCA	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSANAG00000025446	RTCA	100	93.989	ENSEASG00005015926	RTCA	100	93.989	Equus_asinus_asinus
ENSANAG00000025446	RTCA	100	93.989	ENSECAG00000019831	RTCA	100	93.989	Equus_caballus
ENSANAG00000025446	RTCA	91	81.792	ENSEEUG00000001165	RTCA	100	81.792	Erinaceus_europaeus
ENSANAG00000025446	RTCA	99	72.022	ENSELUG00000003741	rtca	99	72.022	Esox_lucius
ENSANAG00000025446	RTCA	100	94.536	ENSFCAG00000024460	RTCA	100	94.536	Felis_catus
ENSANAG00000025446	RTCA	91	82.583	ENSFALG00000002443	RTCA	90	82.583	Ficedula_albicollis
ENSANAG00000025446	RTCA	98	74.309	ENSFDAG00000016084	-	100	74.309	Fukomys_damarensis
ENSANAG00000025446	RTCA	100	94.809	ENSFDAG00000012070	-	100	94.809	Fukomys_damarensis
ENSANAG00000025446	RTCA	72	61.832	ENSFHEG00000002868	rtca	97	67.982	Fundulus_heteroclitus
ENSANAG00000025446	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSANAG00000025446	RTCA	100	81.967	ENSGALG00000005277	RTCA	100	81.967	Gallus_gallus
ENSANAG00000025446	RTCA	100	71.038	ENSGAFG00000011853	rtca	99	71.038	Gambusia_affinis
ENSANAG00000025446	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSANAG00000025446	RTCA	80	82.935	ENSGAGG00000023306	RTCA	100	82.935	Gopherus_agassizii
ENSANAG00000025446	RTCA	100	97.268	ENSGGOG00000009546	-	100	97.411	Gorilla_gorilla
ENSANAG00000025446	RTCA	100	96.448	ENSGGOG00000044018	-	100	96.448	Gorilla_gorilla
ENSANAG00000025446	RTCA	99	70.637	ENSHBUG00000002114	rtca	98	70.637	Haplochromis_burtoni
ENSANAG00000025446	RTCA	100	93.443	ENSHGLG00000002617	RTCA	100	93.443	Heterocephalus_glaber_female
ENSANAG00000025446	RTCA	100	93.443	ENSHGLG00100006056	RTCA	100	93.443	Heterocephalus_glaber_male
ENSANAG00000025446	RTCA	99	64.820	ENSHCOG00000020628	rtca	88	64.820	Hippocampus_comes
ENSANAG00000025446	RTCA	100	72.951	ENSIPUG00000024803	rtca	100	72.951	Ictalurus_punctatus
ENSANAG00000025446	RTCA	100	82.561	ENSSTOG00000033099	-	100	82.561	Ictidomys_tridecemlineatus
ENSANAG00000025446	RTCA	100	87.432	ENSSTOG00000013528	-	100	87.432	Ictidomys_tridecemlineatus
ENSANAG00000025446	RTCA	100	65.847	ENSJJAG00000016178	Rtca	100	65.847	Jaculus_jaculus
ENSANAG00000025446	RTCA	100	71.585	ENSKMAG00000006651	rtca	99	71.585	Kryptolebias_marmoratus
ENSANAG00000025446	RTCA	99	69.806	ENSLBEG00000028971	rtca	99	69.806	Labrus_bergylta
ENSANAG00000025446	RTCA	88	69.159	ENSLBEG00000002448	-	99	69.159	Labrus_bergylta
ENSANAG00000025446	RTCA	100	77.869	ENSLACG00000013666	RTCA	100	77.869	Latimeria_chalumnae
ENSANAG00000025446	RTCA	100	72.678	ENSLOCG00000000093	rtca	99	72.678	Lepisosteus_oculatus
ENSANAG00000025446	RTCA	100	92.623	ENSLAFG00000001473	RTCA	100	92.623	Loxodonta_africana
ENSANAG00000025446	RTCA	100	97.541	ENSMFAG00000034132	RTCA	100	97.541	Macaca_fascicularis
ENSANAG00000025446	RTCA	100	96.995	ENSMMUG00000019105	RTCA	100	96.995	Macaca_mulatta
ENSANAG00000025446	RTCA	84	97.735	ENSMNEG00000037163	RTCA	100	97.735	Macaca_nemestrina
ENSANAG00000025446	RTCA	100	79.781	ENSMLEG00000042151	RTCA	100	79.781	Mandrillus_leucophaeus
ENSANAG00000025446	RTCA	100	73.224	ENSMAMG00000016536	rtca	100	73.224	Mastacembelus_armatus
ENSANAG00000025446	RTCA	99	70.914	ENSMZEG00005017945	rtca	98	70.914	Maylandia_zebra
ENSANAG00000025446	RTCA	87	80.878	ENSMGAG00000006892	RTCA	99	80.878	Meleagris_gallopavo
ENSANAG00000025446	RTCA	100	91.530	ENSMAUG00000008488	Rtca	100	91.530	Mesocricetus_auratus
ENSANAG00000025446	RTCA	84	95.469	ENSMICG00000008643	RTCA	100	95.469	Microcebus_murinus
ENSANAG00000025446	RTCA	100	91.530	ENSMOCG00000016660	Rtca	100	91.530	Microtus_ochrogaster
ENSANAG00000025446	RTCA	84	71.521	ENSMMOG00000007750	rtca	100	71.521	Mola_mola
ENSANAG00000025446	RTCA	100	90.164	ENSMODG00000003557	RTCA	100	90.164	Monodelphis_domestica
ENSANAG00000025446	RTCA	100	72.678	ENSMALG00000020844	rtca	100	72.678	Monopterus_albus
ENSANAG00000025446	RTCA	100	90.984	MGP_CAROLIEiJ_G0025565	Rtca	100	90.984	Mus_caroli
ENSANAG00000025446	RTCA	100	90.437	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSANAG00000025446	RTCA	100	90.710	MGP_PahariEiJ_G0027011	Rtca	100	90.710	Mus_pahari
ENSANAG00000025446	RTCA	100	91.257	MGP_SPRETEiJ_G0026515	Rtca	100	91.549	Mus_spretus
ENSANAG00000025446	RTCA	100	95.082	ENSMPUG00000012119	RTCA	100	95.082	Mustela_putorius_furo
ENSANAG00000025446	RTCA	100	86.921	ENSMLUG00000009922	RTCA	100	86.921	Myotis_lucifugus
ENSANAG00000025446	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSANAG00000025446	RTCA	99	70.914	ENSNBRG00000003062	rtca	98	70.914	Neolamprologus_brichardi
ENSANAG00000025446	RTCA	100	97.268	ENSNLEG00000031426	RTCA	100	97.268	Nomascus_leucogenys
ENSANAG00000025446	RTCA	59	95.122	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSANAG00000025446	RTCA	73	87.361	ENSOPRG00000012092	RTCA	71	87.361	Ochotona_princeps
ENSANAG00000025446	RTCA	95	94.253	ENSODEG00000006990	RTCA	96	94.302	Octodon_degus
ENSANAG00000025446	RTCA	99	70.637	ENSONIG00000007753	rtca	98	70.637	Oreochromis_niloticus
ENSANAG00000025446	RTCA	87	86.435	ENSOANG00000012055	RTCA	98	86.435	Ornithorhynchus_anatinus
ENSANAG00000025446	RTCA	100	94.809	ENSOCUG00000014247	RTCA	100	94.809	Oryctolagus_cuniculus
ENSANAG00000025446	RTCA	100	70.765	ENSORLG00000013605	rtca	100	70.765	Oryzias_latipes
ENSANAG00000025446	RTCA	100	70.765	ENSORLG00020001904	rtca	100	70.765	Oryzias_latipes_hni
ENSANAG00000025446	RTCA	100	70.765	ENSORLG00015021064	rtca	100	70.765	Oryzias_latipes_hsok
ENSANAG00000025446	RTCA	100	71.038	ENSOMEG00000000756	rtca	100	71.038	Oryzias_melastigma
ENSANAG00000025446	RTCA	100	84.973	ENSOGAG00000005627	RTCA	100	84.973	Otolemur_garnettii
ENSANAG00000025446	RTCA	87	93.711	ENSOARG00000018122	RTCA	100	93.711	Ovis_aries
ENSANAG00000025446	RTCA	100	96.306	ENSPPAG00000035119	RTCA	100	97.411	Pan_paniscus
ENSANAG00000025446	RTCA	100	94.536	ENSPPRG00000000350	RTCA	100	94.536	Panthera_pardus
ENSANAG00000025446	RTCA	100	94.262	ENSPTIG00000012816	RTCA	100	94.262	Panthera_tigris_altaica
ENSANAG00000025446	RTCA	100	96.306	ENSPTRG00000001004	RTCA	100	97.411	Pan_troglodytes
ENSANAG00000025446	RTCA	100	96.995	ENSPANG00000000346	RTCA	100	96.995	Papio_anubis
ENSANAG00000025446	RTCA	100	73.770	ENSPKIG00000001653	rtca	100	73.770	Paramormyrops_kingsleyae
ENSANAG00000025446	RTCA	100	82.787	ENSPSIG00000011408	RTCA	100	82.787	Pelodiscus_sinensis
ENSANAG00000025446	RTCA	100	90.984	ENSPEMG00000018582	Rtca	100	90.984	Peromyscus_maniculatus_bairdii
ENSANAG00000025446	RTCA	99	58.564	ENSPMAG00000009110	rtca	99	57.808	Petromyzon_marinus
ENSANAG00000025446	RTCA	100	90.437	ENSPCIG00000007684	RTCA	100	90.437	Phascolarctos_cinereus
ENSANAG00000025446	RTCA	100	71.390	ENSPFOG00000004824	rtca	100	71.390	Poecilia_formosa
ENSANAG00000025446	RTCA	100	71.585	ENSPLAG00000011753	rtca	99	71.585	Poecilia_latipinna
ENSANAG00000025446	RTCA	100	71.585	ENSPMEG00000020469	rtca	99	71.585	Poecilia_mexicana
ENSANAG00000025446	RTCA	100	72.404	ENSPREG00000001365	rtca	99	72.404	Poecilia_reticulata
ENSANAG00000025446	RTCA	100	97.268	ENSPPYG00000001115	RTCA	100	97.268	Pongo_abelii
ENSANAG00000025446	RTCA	100	90.164	ENSPCAG00000005076	RTCA	100	90.164	Procavia_capensis
ENSANAG00000025446	RTCA	100	95.902	ENSPCOG00000005603	RTCA	100	95.902	Propithecus_coquereli
ENSANAG00000025446	RTCA	100	92.084	ENSPVAG00000009478	RTCA	100	92.084	Pteropus_vampyrus
ENSANAG00000025446	RTCA	99	70.914	ENSPNYG00000004722	rtca	98	70.914	Pundamilia_nyererei
ENSANAG00000025446	RTCA	100	73.224	ENSPNAG00000022270	rtca	100	73.224	Pygocentrus_nattereri
ENSANAG00000025446	RTCA	100	90.437	ENSRNOG00000014575	Rtca	100	90.437	Rattus_norvegicus
ENSANAG00000025446	RTCA	100	96.042	ENSRBIG00000041180	RTCA	100	96.764	Rhinopithecus_bieti
ENSANAG00000025446	RTCA	100	96.721	ENSRROG00000024929	RTCA	100	96.721	Rhinopithecus_roxellana
ENSANAG00000025446	RTCA	100	98.634	ENSSBOG00000028626	RTCA	100	98.634	Saimiri_boliviensis_boliviensis
ENSANAG00000025446	RTCA	100	90.164	ENSSHAG00000001758	RTCA	100	90.164	Sarcophilus_harrisii
ENSANAG00000025446	RTCA	98	69.722	ENSSMAG00000014680	rtca	97	69.722	Scophthalmus_maximus
ENSANAG00000025446	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSANAG00000025446	RTCA	96	71.795	ENSSLDG00000018985	rtca	95	71.795	Seriola_lalandi_dorsalis
ENSANAG00000025446	RTCA	87	86.435	ENSSARG00000013993	RTCA	100	86.435	Sorex_araneus
ENSANAG00000025446	RTCA	100	70.219	ENSSPAG00000011938	rtca	99	70.219	Stegastes_partitus
ENSANAG00000025446	RTCA	100	93.989	ENSSSCG00000006865	RTCA	100	93.989	Sus_scrofa
ENSANAG00000025446	RTCA	100	82.240	ENSTGUG00000005154	RTCA	100	82.240	Taeniopygia_guttata
ENSANAG00000025446	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSANAG00000025446	RTCA	100	71.038	ENSTNIG00000004725	rtca	100	71.038	Tetraodon_nigroviridis
ENSANAG00000025446	RTCA	60	89.091	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSANAG00000025446	RTCA	100	92.612	ENSTTRG00000015327	RTCA	100	92.612	Tursiops_truncatus
ENSANAG00000025446	RTCA	94	91.837	ENSUAMG00000017265	RTCA	96	91.837	Ursus_americanus
ENSANAG00000025446	RTCA	100	93.989	ENSUMAG00000007881	RTCA	100	93.989	Ursus_maritimus
ENSANAG00000025446	RTCA	87	84.858	ENSVPAG00000001039	RTCA	87	84.545	Vicugna_pacos
ENSANAG00000025446	RTCA	100	94.262	ENSVVUG00000022041	RTCA	68	94.262	Vulpes_vulpes
ENSANAG00000025446	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSANAG00000025446	RTCA	100	62.022	ENSXCOG00000008002	rtca	100	62.022	Xiphophorus_couchianus
ENSANAG00000025446	RTCA	100	71.311	ENSXMAG00000005482	rtca	99	71.311	Xiphophorus_maculatus