EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000025573 (Gene tree)
Gene ID: 105716049
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 218565 bases
Position: chrKZ199481.1:828664-1047228
Accession: 105716049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000015400	S1	PF00575.23	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000033239	SRBD1-201	4092	XM_012450583	ENSANAP00000015400	994 (aa)	XP_012306006	A0A2K5D365

Gene Model

Click here to download ENSANAG00000025573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000025573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000025573	SRBD1	100	94.171	ENSG00000068784	SRBD1	100	94.171	Homo_sapiens
ENSANAG00000025573	SRBD1	100	51.521	ENSAPOG00000005103	si:ch211-117n7.8	95	53.148	Acanthochromis_polyacanthus
ENSANAG00000025573	SRBD1	100	90.653	ENSAMEG00000005993	SRBD1	100	90.653	Ailuropoda_melanoleuca
ENSANAG00000025573	SRBD1	95	52.637	ENSACIG00000009875	si:ch211-117n7.8	97	52.707	Amphilophus_citrinellus
ENSANAG00000025573	SRBD1	98	51.158	ENSAOCG00000024718	si:ch211-117n7.8	97	51.780	Amphiprion_ocellaris
ENSANAG00000025573	SRBD1	97	52.284	ENSAPEG00000002645	si:ch211-117n7.8	99	52.342	Amphiprion_percula
ENSANAG00000025573	SRBD1	99	51.282	ENSATEG00000010844	si:ch211-117n7.8	97	51.980	Anabas_testudineus
ENSANAG00000025573	SRBD1	100	70.900	ENSAPLG00000006313	SRBD1	100	71.000	Anas_platyrhynchos
ENSANAG00000025573	SRBD1	99	50.584	ENSACLG00000024219	si:ch211-117n7.8	94	52.210	Astatotilapia_calliptera
ENSANAG00000025573	SRBD1	86	59.170	ENSAMXG00000004294	SRBD1	93	55.797	Astyanax_mexicanus
ENSANAG00000025573	SRBD1	100	87.249	ENSBTAG00000007508	SRBD1	97	87.952	Bos_taurus
ENSANAG00000025573	SRBD1	100	97.485	ENSCJAG00000000727	SRBD1	100	97.485	Callithrix_jacchus
ENSANAG00000025573	SRBD1	100	89.769	ENSCAFG00000002554	SRBD1	100	89.769	Canis_familiaris
ENSANAG00000025573	SRBD1	100	86.847	ENSCAFG00020026284	SRBD1	99	89.895	Canis_lupus_dingo
ENSANAG00000025573	SRBD1	100	87.651	ENSCHIG00000016535	SRBD1	98	88.353	Capra_hircus
ENSANAG00000025573	SRBD1	100	90.782	ENSTSYG00000012797	SRBD1	100	90.782	Carlito_syrichta
ENSANAG00000025573	SRBD1	100	87.450	ENSCPOG00000004773	SRBD1	100	87.450	Cavia_porcellus
ENSANAG00000025573	SRBD1	100	98.290	ENSCCAG00000025589	SRBD1	100	98.290	Cebus_capucinus
ENSANAG00000025573	SRBD1	100	95.070	ENSCATG00000039530	SRBD1	100	95.070	Cercocebus_atys
ENSANAG00000025573	SRBD1	100	88.377	ENSCLAG00000008623	SRBD1	100	88.377	Chinchilla_lanigera
ENSANAG00000025573	SRBD1	100	95.171	ENSCSAG00000013350	SRBD1	100	95.171	Chlorocebus_sabaeus
ENSANAG00000025573	SRBD1	93	76.641	ENSCHOG00000003805	SRBD1	93	76.641	Choloepus_hoffmanni
ENSANAG00000025573	SRBD1	100	72.954	ENSCPBG00000005677	SRBD1	100	72.727	Chrysemys_picta_bellii
ENSANAG00000025573	SRBD1	79	42.366	ENSCING00000005950	-	99	42.366	Ciona_intestinalis
ENSANAG00000025573	SRBD1	79	43.199	ENSCSAVG00000000861	-	99	43.199	Ciona_savignyi
ENSANAG00000025573	SRBD1	99	94.859	ENSCANG00000016307	SRBD1	99	94.859	Colobus_angolensis_palliatus
ENSANAG00000025573	SRBD1	100	84.068	ENSCGRG00001000513	Srbd1	100	84.068	Cricetulus_griseus_chok1gshd
ENSANAG00000025573	SRBD1	100	84.068	ENSCGRG00000002283	Srbd1	100	84.068	Cricetulus_griseus_crigri
ENSANAG00000025573	SRBD1	100	50.588	ENSCSEG00000000856	si:ch211-117n7.8	97	51.521	Cynoglossus_semilaevis
ENSANAG00000025573	SRBD1	84	57.143	ENSCVAG00000020212	si:ch211-117n7.8	90	57.143	Cyprinodon_variegatus
ENSANAG00000025573	SRBD1	100	89.890	ENSDNOG00000018686	SRBD1	100	89.890	Dasypus_novemcinctus
ENSANAG00000025573	SRBD1	100	86.030	ENSDORG00000010468	Srbd1	100	86.030	Dipodomys_ordii
ENSANAG00000025573	SRBD1	94	34.413	FBgn0051156	CG31156	98	34.615	Drosophila_melanogaster
ENSANAG00000025573	SRBD1	89	83.214	ENSETEG00000000739	SRBD1	91	83.214	Echinops_telfairi
ENSANAG00000025573	SRBD1	73	48.707	ENSEBUG00000008902	si:ch211-117n7.8	96	48.707	Eptatretus_burgeri
ENSANAG00000025573	SRBD1	100	88.052	ENSEASG00005003132	SRBD1	97	93.631	Equus_asinus_asinus
ENSANAG00000025573	SRBD1	100	91.064	ENSECAG00000013865	SRBD1	98	91.064	Equus_caballus
ENSANAG00000025573	SRBD1	85	59.649	ENSELUG00000012592	si:ch211-117n7.8	82	59.649	Esox_lucius
ENSANAG00000025573	SRBD1	100	90.763	ENSFCAG00000005101	SRBD1	100	90.763	Felis_catus
ENSANAG00000025573	SRBD1	100	68.410	ENSFALG00000012966	SRBD1	100	67.463	Ficedula_albicollis
ENSANAG00000025573	SRBD1	98	86.434	ENSFDAG00000016670	SRBD1	98	86.694	Fukomys_damarensis
ENSANAG00000025573	SRBD1	95	52.917	ENSFHEG00000019480	si:ch211-117n7.8	92	52.917	Fundulus_heteroclitus
ENSANAG00000025573	SRBD1	50	52.252	ENSGMOG00000018010	-	100	52.252	Gadus_morhua
ENSANAG00000025573	SRBD1	100	70.411	ENSGALG00000009990	SRBD1	100	69.940	Gallus_gallus
ENSANAG00000025573	SRBD1	98	51.100	ENSGAFG00000019664	si:ch211-117n7.8	97	51.423	Gambusia_affinis
ENSANAG00000025573	SRBD1	62	60.800	ENSGACG00000010794	si:ch211-117n7.8	100	60.960	Gasterosteus_aculeatus
ENSANAG00000025573	SRBD1	84	80.505	ENSGAGG00000006166	SRBD1	99	80.505	Gopherus_agassizii
ENSANAG00000025573	SRBD1	97	94.324	ENSGGOG00000005910	SRBD1	99	94.283	Gorilla_gorilla
ENSANAG00000025573	SRBD1	89	47.743	ENSHBUG00000013207	si:ch211-117n7.8	99	45.333	Haplochromis_burtoni
ENSANAG00000025573	SRBD1	99	88.218	ENSHGLG00000018153	-	99	88.218	Heterocephalus_glaber_female
ENSANAG00000025573	SRBD1	99	88.016	ENSHGLG00100015183	-	99	88.016	Heterocephalus_glaber_male
ENSANAG00000025573	SRBD1	85	60.563	ENSIPUG00000009661	srbd1	97	55.771	Ictalurus_punctatus
ENSANAG00000025573	SRBD1	100	90.352	ENSSTOG00000005898	SRBD1	100	90.352	Ictidomys_tridecemlineatus
ENSANAG00000025573	SRBD1	100	80.843	ENSJJAG00000022244	Srbd1	100	80.843	Jaculus_jaculus
ENSANAG00000025573	SRBD1	98	51.400	ENSKMAG00000003473	si:ch211-117n7.8	97	51.570	Kryptolebias_marmoratus
ENSANAG00000025573	SRBD1	98	51.140	ENSLBEG00000027518	si:ch211-117n7.8	83	56.506	Labrus_bergylta
ENSANAG00000025573	SRBD1	85	70.331	ENSLACG00000009790	SRBD1	100	70.331	Latimeria_chalumnae
ENSANAG00000025573	SRBD1	100	56.946	ENSLOCG00000016360	si:ch211-117n7.8	99	56.946	Lepisosteus_oculatus
ENSANAG00000025573	SRBD1	100	95.372	ENSMFAG00000042026	SRBD1	100	95.372	Macaca_fascicularis
ENSANAG00000025573	SRBD1	100	95.070	ENSMMUG00000003490	SRBD1	100	95.070	Macaca_mulatta
ENSANAG00000025573	SRBD1	100	92.656	ENSMNEG00000034701	SRBD1	100	92.656	Macaca_nemestrina
ENSANAG00000025573	SRBD1	100	95.171	ENSMLEG00000000745	SRBD1	100	95.171	Mandrillus_leucophaeus
ENSANAG00000025573	SRBD1	82	56.490	ENSMAMG00000021921	si:ch211-117n7.8	85	56.140	Mastacembelus_armatus
ENSANAG00000025573	SRBD1	99	50.584	ENSMZEG00005027369	si:ch211-117n7.8	94	52.210	Maylandia_zebra
ENSANAG00000025573	SRBD1	80	74.937	ENSMGAG00000010273	SRBD1	100	74.937	Meleagris_gallopavo
ENSANAG00000025573	SRBD1	79	86.224	ENSMAUG00000013916	Srbd1	99	83.768	Mesocricetus_auratus
ENSANAG00000025573	SRBD1	100	92.470	ENSMICG00000007835	SRBD1	100	92.470	Microcebus_murinus
ENSANAG00000025573	SRBD1	100	83.450	ENSMOCG00000018716	Srbd1	100	83.450	Microtus_ochrogaster
ENSANAG00000025573	SRBD1	84	56.052	ENSMMOG00000007507	si:ch211-117n7.8	88	55.776	Mola_mola
ENSANAG00000025573	SRBD1	99	50.484	ENSMALG00000001562	si:ch211-117n7.8	93	52.361	Monopterus_albus
ENSANAG00000025573	SRBD1	100	82.010	MGP_CAROLIEiJ_G0021934	Srbd1	99	85.942	Mus_caroli
ENSANAG00000025573	SRBD1	100	82.111	ENSMUSG00000024135	Srbd1	99	85.204	Mus_musculus
ENSANAG00000025573	SRBD1	100	81.106	MGP_PahariEiJ_G0020924	Srbd1	100	81.106	Mus_pahari
ENSANAG00000025573	SRBD1	100	82.211	MGP_SPRETEiJ_G0022850	Srbd1	100	82.211	Mus_spretus
ENSANAG00000025573	SRBD1	100	87.940	ENSMLUG00000007039	SRBD1	100	87.940	Myotis_lucifugus
ENSANAG00000025573	SRBD1	100	82.698	ENSNGAG00000011893	Srbd1	100	82.307	Nannospalax_galili
ENSANAG00000025573	SRBD1	89	53.303	ENSNBRG00000012873	si:ch211-117n7.8	99	50.407	Neolamprologus_brichardi
ENSANAG00000025573	SRBD1	100	94.372	ENSNLEG00000016877	SRBD1	100	94.372	Nomascus_leucogenys
ENSANAG00000025573	SRBD1	100	84.623	ENSODEG00000012095	SRBD1	100	84.623	Octodon_degus
ENSANAG00000025573	SRBD1	99	50.681	ENSONIG00000000945	si:ch211-117n7.8	99	57.933	Oreochromis_niloticus
ENSANAG00000025573	SRBD1	100	90.863	ENSOCUG00000015385	SRBD1	100	90.863	Oryctolagus_cuniculus
ENSANAG00000025573	SRBD1	99	47.633	ENSORLG00000004427	si:ch211-117n7.8	81	53.475	Oryzias_latipes
ENSANAG00000025573	SRBD1	99	50.097	ENSORLG00020012792	si:ch211-117n7.8	82	56.941	Oryzias_latipes_hni
ENSANAG00000025573	SRBD1	99	50.578	ENSORLG00015018598	si:ch211-117n7.8	84	55.632	Oryzias_latipes_hsok
ENSANAG00000025573	SRBD1	86	54.850	ENSOMEG00000012229	si:ch211-117n7.8	83	54.850	Oryzias_melastigma
ENSANAG00000025573	SRBD1	100	84.538	ENSOGAG00000001076	SRBD1	100	84.538	Otolemur_garnettii
ENSANAG00000025573	SRBD1	100	83.414	ENSOARG00000005958	SRBD1	100	84.093	Ovis_aries
ENSANAG00000025573	SRBD1	100	94.271	ENSPPAG00000038442	SRBD1	100	94.271	Pan_paniscus
ENSANAG00000025573	SRBD1	100	90.754	ENSPPRG00000003449	SRBD1	100	90.754	Panthera_pardus
ENSANAG00000025573	SRBD1	100	90.854	ENSPTIG00000012495	SRBD1	100	90.854	Panthera_tigris_altaica
ENSANAG00000025573	SRBD1	100	94.271	ENSPTRG00000011889	SRBD1	100	94.271	Pan_troglodytes
ENSANAG00000025573	SRBD1	100	94.970	ENSPANG00000008063	SRBD1	100	94.970	Papio_anubis
ENSANAG00000025573	SRBD1	99	53.119	ENSPKIG00000021973	si:ch211-117n7.8	97	54.102	Paramormyrops_kingsleyae
ENSANAG00000025573	SRBD1	100	72.161	ENSPSIG00000008992	SRBD1	100	72.563	Pelodiscus_sinensis
ENSANAG00000025573	SRBD1	87	53.623	ENSPMGG00000013348	si:ch211-117n7.8	98	51.120	Periophthalmus_magnuspinnatus
ENSANAG00000025573	SRBD1	100	82.630	ENSPEMG00000020684	Srbd1	100	82.630	Peromyscus_maniculatus_bairdii
ENSANAG00000025573	SRBD1	98	51.343	ENSPFOG00000010650	si:ch211-117n7.8	97	51.668	Poecilia_formosa
ENSANAG00000025573	SRBD1	98	51.045	ENSPLAG00000002141	si:ch211-117n7.8	97	51.365	Poecilia_latipinna
ENSANAG00000025573	SRBD1	98	51.440	ENSPMEG00000018537	si:ch211-117n7.8	97	51.766	Poecilia_mexicana
ENSANAG00000025573	SRBD1	97	51.506	ENSPREG00000003258	si:ch211-117n7.8	85	56.958	Poecilia_reticulata
ENSANAG00000025573	SRBD1	100	86.635	ENSPPYG00000012444	SRBD1	99	86.635	Pongo_abelii
ENSANAG00000025573	SRBD1	82	82.228	ENSPCAG00000005629	SRBD1	85	82.228	Procavia_capensis
ENSANAG00000025573	SRBD1	100	80.280	ENSPCOG00000017669	SRBD1	100	80.280	Propithecus_coquereli
ENSANAG00000025573	SRBD1	100	81.508	ENSPVAG00000001782	SRBD1	100	81.508	Pteropus_vampyrus
ENSANAG00000025573	SRBD1	89	52.184	ENSPNYG00000000508	si:ch211-117n7.8	99	49.389	Pundamilia_nyererei
ENSANAG00000025573	SRBD1	96	56.818	ENSPNAG00000013492	SRBD1	95	56.818	Pygocentrus_nattereri
ENSANAG00000025573	SRBD1	100	80.622	ENSRNOG00000014720	Srbd1	99	81.325	Rattus_norvegicus
ENSANAG00000025573	SRBD1	99	94.758	ENSRBIG00000033486	SRBD1	99	94.758	Rhinopithecus_bieti
ENSANAG00000025573	SRBD1	99	94.758	ENSRROG00000041599	SRBD1	99	94.758	Rhinopithecus_roxellana
ENSANAG00000025573	SRBD1	100	98.390	ENSSBOG00000024982	SRBD1	100	98.390	Saimiri_boliviensis_boliviensis
ENSANAG00000025573	SRBD1	94	54.937	ENSSFOG00015001128	si:ch211-117n7.8	99	54.832	Scleropages_formosus
ENSANAG00000025573	SRBD1	99	50.580	ENSSMAG00000018256	si:ch211-117n7.8	94	52.352	Scophthalmus_maximus
ENSANAG00000025573	SRBD1	86	56.387	ENSSLDG00000023189	si:ch211-117n7.8	84	56.387	Seriola_lalandi_dorsalis
ENSANAG00000025573	SRBD1	100	77.387	ENSSARG00000009740	SRBD1	100	77.387	Sorex_araneus
ENSANAG00000025573	SRBD1	91	73.136	ENSSPUG00000010475	SRBD1	98	74.718	Sphenodon_punctatus
ENSANAG00000025573	SRBD1	89	52.533	ENSSPAG00000008092	-	95	51.713	Stegastes_partitus
ENSANAG00000025573	SRBD1	100	88.956	ENSSSCG00000008445	SRBD1	98	89.558	Sus_scrofa
ENSANAG00000025573	SRBD1	84	77.108	ENSTGUG00000003878	SRBD1	100	77.108	Taeniopygia_guttata
ENSANAG00000025573	SRBD1	99	50.720	ENSTRUG00000007080	si:ch211-117n7.8	96	55.793	Takifugu_rubripes
ENSANAG00000025573	SRBD1	99	50.000	ENSTNIG00000007464	si:ch211-117n7.8	97	50.200	Tetraodon_nigroviridis
ENSANAG00000025573	SRBD1	76	98.936	ENSTBEG00000004556	SRBD1	76	98.936	Tupaia_belangeri
ENSANAG00000025573	SRBD1	94	92.166	ENSTTRG00000011871	SRBD1	94	92.166	Tursiops_truncatus
ENSANAG00000025573	SRBD1	100	90.462	ENSUAMG00000008126	SRBD1	97	94.203	Ursus_americanus
ENSANAG00000025573	SRBD1	100	90.462	ENSUMAG00000012902	SRBD1	98	90.462	Ursus_maritimus
ENSANAG00000025573	SRBD1	91	91.400	ENSVPAG00000006825	SRBD1	100	91.400	Vicugna_pacos
ENSANAG00000025573	SRBD1	100	89.357	ENSVVUG00000005389	SRBD1	100	89.960	Vulpes_vulpes
ENSANAG00000025573	SRBD1	100	52.546	ENSXETG00000002760	srbd1	100	52.526	Xenopus_tropicalis
ENSANAG00000025573	SRBD1	98	50.943	ENSXMAG00000016861	si:ch211-117n7.8	97	51.261	Xiphophorus_maculatus