EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000025860 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 256 bases
Position: chrKZ201691.1:1650663-1650918
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000015976	LSM	PF01423.22	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000033820	-	219	-	ENSANAP00000015976	72 (aa)	-	A0A2K5D4U4

Gene Model

Click here to download ENSANAG00000025860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000025860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000025860	-	85	69.333	ENSANAG00000032845	SNRPF	87	69.333
ENSANAG00000025860	-	79	61.972	ENSANAG00000020297	-	65	61.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000025860	-	85	69.333	ENSG00000139343	SNRPF	87	69.333	Homo_sapiens
ENSANAG00000025860	-	83	67.568	ENSAPOG00000003377	snrpf	59	66.667	Acanthochromis_polyacanthus
ENSANAG00000025860	-	83	68.919	ENSAMEG00000002166	-	87	68.919	Ailuropoda_melanoleuca
ENSANAG00000025860	-	86	57.895	ENSAMEG00000018718	-	87	58.667	Ailuropoda_melanoleuca
ENSANAG00000025860	-	82	67.123	ENSACIG00000013216	snrpf	86	67.123	Amphilophus_citrinellus
ENSANAG00000025860	-	82	67.123	ENSAOCG00000015108	snrpf	86	67.123	Amphiprion_ocellaris
ENSANAG00000025860	-	82	67.123	ENSAPEG00000022022	snrpf	86	67.123	Amphiprion_percula
ENSANAG00000025860	-	82	67.123	ENSATEG00000022625	snrpf	78	67.123	Anabas_testudineus
ENSANAG00000025860	-	83	67.568	ENSACAG00000014073	SNRPF	85	67.568	Anolis_carolinensis
ENSANAG00000025860	-	82	67.123	ENSACLG00000016066	snrpf	86	67.123	Astatotilapia_calliptera
ENSANAG00000025860	-	85	65.333	ENSAMXG00000007421	snrpf	87	65.333	Astyanax_mexicanus
ENSANAG00000025860	-	85	69.333	ENSBTAG00000016271	SNRPF	87	69.333	Bos_taurus
ENSANAG00000025860	-	89	66.667	ENSBTAG00000050012	-	93	65.333	Bos_taurus
ENSANAG00000025860	-	88	53.247	WBGene00004918	snr-5	85	54.167	Caenorhabditis_elegans
ENSANAG00000025860	-	85	69.333	ENSCJAG00000002705	-	87	69.333	Callithrix_jacchus
ENSANAG00000025860	-	85	69.333	ENSCAFG00000006395	-	68	69.333	Canis_familiaris
ENSANAG00000025860	-	79	63.380	ENSCAFG00000031151	-	85	63.014	Canis_familiaris
ENSANAG00000025860	-	85	64.000	ENSCAFG00020013161	-	74	68.571	Canis_lupus_dingo
ENSANAG00000025860	-	79	63.380	ENSCAFG00020010823	-	85	63.014	Canis_lupus_dingo
ENSANAG00000025860	-	90	67.089	ENSTSYG00000031636	-	61	65.753	Carlito_syrichta
ENSANAG00000025860	-	85	62.500	ENSTSYG00000030635	-	87	61.333	Carlito_syrichta
ENSANAG00000025860	-	85	70.270	ENSTSYG00000036502	-	87	70.270	Carlito_syrichta
ENSANAG00000025860	-	83	68.919	ENSCAPG00000007242	SNRPF	87	68.919	Cavia_aperea
ENSANAG00000025860	-	85	69.333	ENSCPOG00000013898	SNRPF	87	69.333	Cavia_porcellus
ENSANAG00000025860	-	100	70.930	ENSCCAG00000033627	-	59	68.000	Cebus_capucinus
ENSANAG00000025860	-	85	69.333	ENSCCAG00000037378	-	87	69.333	Cebus_capucinus
ENSANAG00000025860	-	100	70.930	ENSCCAG00000017356	-	87	69.333	Cebus_capucinus
ENSANAG00000025860	-	85	69.333	ENSCLAG00000007200	SNRPF	87	69.333	Chinchilla_lanigera
ENSANAG00000025860	-	85	69.333	ENSCSAG00000003602	-	61	69.333	Chlorocebus_sabaeus
ENSANAG00000025860	-	69	68.750	ENSCHOG00000009392	SNRPF	100	68.750	Choloepus_hoffmanni
ENSANAG00000025860	-	85	62.667	ENSCPBG00000006227	-	87	62.667	Chrysemys_picta_bellii
ENSANAG00000025860	-	99	65.882	ENSCPBG00000024287	-	60	64.865	Chrysemys_picta_bellii
ENSANAG00000025860	-	100	67.442	ENSCPBG00000026463	-	87	66.667	Chrysemys_picta_bellii
ENSANAG00000025860	-	100	62.791	ENSCPBG00000001985	-	89	62.667	Chrysemys_picta_bellii
ENSANAG00000025860	-	99	62.353	ENSCSAVG00000007498	-	84	62.162	Ciona_savignyi
ENSANAG00000025860	-	85	69.333	ENSCGRG00001017100	-	87	69.333	Cricetulus_griseus_chok1gshd
ENSANAG00000025860	-	85	66.216	ENSCGRG00001008965	-	58	66.216	Cricetulus_griseus_chok1gshd
ENSANAG00000025860	-	92	68.354	ENSCGRG00000018878	-	94	66.216	Cricetulus_griseus_crigri
ENSANAG00000025860	-	85	69.333	ENSCGRG00000000336	-	87	69.333	Cricetulus_griseus_crigri
ENSANAG00000025860	-	85	68.000	ENSCSEG00000004748	snrpf	87	68.000	Cynoglossus_semilaevis
ENSANAG00000025860	-	83	67.568	ENSCVAG00000000397	snrpf	59	67.568	Cyprinodon_variegatus
ENSANAG00000025860	-	85	64.935	ENSDARG00000105037	snrpf	88	66.234	Danio_rerio
ENSANAG00000025860	-	85	68.000	ENSDNOG00000048989	-	67	68.000	Dasypus_novemcinctus
ENSANAG00000025860	-	85	60.000	ENSDNOG00000049373	-	65	60.000	Dasypus_novemcinctus
ENSANAG00000025860	-	63	64.407	ENSDORG00000029740	-	72	64.407	Dipodomys_ordii
ENSANAG00000025860	-	81	61.111	ENSDORG00000025351	-	100	61.111	Dipodomys_ordii
ENSANAG00000025860	-	99	55.294	FBgn0000426	SmF	84	56.757	Drosophila_melanogaster
ENSANAG00000025860	-	85	69.333	ENSETEG00000001558	-	87	69.333	Echinops_telfairi
ENSANAG00000025860	-	93	55.556	ENSEBUG00000001793	-	66	65.574	Eptatretus_burgeri
ENSANAG00000025860	-	85	69.333	ENSECAG00000019817	SNRPF	61	69.333	Equus_caballus
ENSANAG00000025860	-	83	68.919	ENSEEUG00000013509	SNRPF	87	68.919	Erinaceus_europaeus
ENSANAG00000025860	-	100	66.279	ENSELUG00000007737	RUXF	86	65.333	Esox_lucius
ENSANAG00000025860	-	85	66.667	ENSELUG00000003121	RUXF	87	66.667	Esox_lucius
ENSANAG00000025860	-	97	53.571	ENSFCAG00000031148	-	69	49.333	Felis_catus
ENSANAG00000025860	-	85	53.333	ENSFCAG00000021942	-	87	53.333	Felis_catus
ENSANAG00000025860	-	85	69.333	ENSFCAG00000029966	-	87	69.333	Felis_catus
ENSANAG00000025860	-	83	68.919	ENSFALG00000010799	SNRPF	87	68.000	Ficedula_albicollis
ENSANAG00000025860	-	85	69.333	ENSFDAG00000002831	-	87	69.333	Fukomys_damarensis
ENSANAG00000025860	-	83	67.568	ENSFHEG00000003240	snrpf	65	67.568	Fundulus_heteroclitus
ENSANAG00000025860	-	83	67.568	ENSGMOG00000007741	snrpf	87	67.568	Gadus_morhua
ENSANAG00000025860	-	85	69.333	ENSGALG00000011409	SNRPF	87	69.333	Gallus_gallus
ENSANAG00000025860	-	82	67.123	ENSGAFG00000016187	snrpf	84	67.123	Gambusia_affinis
ENSANAG00000025860	-	83	66.216	ENSGACG00000020055	snrpf	87	66.216	Gasterosteus_aculeatus
ENSANAG00000025860	-	82	64.384	ENSGAGG00000012945	-	69	64.000	Gopherus_agassizii
ENSANAG00000025860	-	74	62.687	ENSGAGG00000014132	-	81	62.687	Gopherus_agassizii
ENSANAG00000025860	-	67	67.742	ENSGAGG00000020974	-	54	65.625	Gopherus_agassizii
ENSANAG00000025860	-	90	65.823	ENSGAGG00000022991	-	80	66.176	Gopherus_agassizii
ENSANAG00000025860	-	64	58.333	ENSGAGG00000011163	-	86	57.143	Gopherus_agassizii
ENSANAG00000025860	-	90	55.128	ENSGGOG00000039564	-	90	52.703	Gorilla_gorilla
ENSANAG00000025860	-	97	54.762	ENSGGOG00000039936	-	83	50.667	Gorilla_gorilla
ENSANAG00000025860	-	85	69.333	ENSGGOG00000001127	-	87	69.333	Gorilla_gorilla
ENSANAG00000025860	-	85	69.333	ENSHGLG00000009108	SNRPF	87	69.333	Heterocephalus_glaber_female
ENSANAG00000025860	-	85	69.333	ENSHGLG00000021172	-	87	69.333	Heterocephalus_glaber_female
ENSANAG00000025860	-	83	68.919	ENSHGLG00100008103	-	87	68.919	Heterocephalus_glaber_male
ENSANAG00000025860	-	85	69.333	ENSHGLG00100019596	-	87	69.333	Heterocephalus_glaber_male
ENSANAG00000025860	-	68	60.000	ENSHCOG00000018663	snrpf	55	60.000	Hippocampus_comes
ENSANAG00000025860	-	85	68.000	ENSIPUG00000018994	snrpf	87	68.000	Ictalurus_punctatus
ENSANAG00000025860	-	85	69.333	ENSSTOG00000010434	-	87	69.333	Ictidomys_tridecemlineatus
ENSANAG00000025860	-	85	69.333	ENSJJAG00000011272	-	87	69.333	Jaculus_jaculus
ENSANAG00000025860	-	100	56.977	ENSJJAG00000010502	-	89	56.000	Jaculus_jaculus
ENSANAG00000025860	-	74	67.164	ENSJJAG00000004828	-	86	66.071	Jaculus_jaculus
ENSANAG00000025860	-	100	60.465	ENSJJAG00000004558	-	89	60.000	Jaculus_jaculus
ENSANAG00000025860	-	85	66.667	ENSKMAG00000013566	snrpf	87	66.667	Kryptolebias_marmoratus
ENSANAG00000025860	-	85	68.000	ENSLBEG00000008800	snrpf	87	68.000	Labrus_bergylta
ENSANAG00000025860	-	85	68.000	ENSLACG00000002456	-	63	68.919	Latimeria_chalumnae
ENSANAG00000025860	-	85	65.333	ENSLOCG00000015744	snrpf	87	65.333	Lepisosteus_oculatus
ENSANAG00000025860	-	83	68.919	ENSLAFG00000017426	SNRPF	87	68.000	Loxodonta_africana
ENSANAG00000025860	-	82	67.123	ENSMAMG00000016593	snrpf	86	67.123	Mastacembelus_armatus
ENSANAG00000025860	-	82	67.123	ENSMZEG00005014701	snrpf	86	67.123	Maylandia_zebra
ENSANAG00000025860	-	83	67.568	ENSMGAG00000011453	-	67	67.568	Meleagris_gallopavo
ENSANAG00000025860	-	85	68.000	ENSMAUG00000008799	-	87	68.000	Mesocricetus_auratus
ENSANAG00000025860	-	67	67.742	ENSMAUG00000016909	-	84	67.742	Mesocricetus_auratus
ENSANAG00000025860	-	96	51.807	ENSMAUG00000010289	-	86	50.000	Mesocricetus_auratus
ENSANAG00000025860	-	67	67.742	ENSMAUG00000019737	-	84	67.742	Mesocricetus_auratus
ENSANAG00000025860	-	85	69.333	ENSMICG00000012153	-	87	69.333	Microcebus_murinus
ENSANAG00000025860	-	85	64.000	ENSMICG00000030494	-	60	64.000	Microcebus_murinus
ENSANAG00000025860	-	85	62.162	ENSMOCG00000022166	-	82	62.162	Microtus_ochrogaster
ENSANAG00000025860	-	75	64.179	ENSMOCG00000020220	-	87	64.179	Microtus_ochrogaster
ENSANAG00000025860	-	85	69.333	ENSMOCG00000020437	Snrpf	87	69.333	Microtus_ochrogaster
ENSANAG00000025860	-	83	66.216	ENSMMOG00000007127	snrpf	87	66.216	Mola_mola
ENSANAG00000025860	-	85	69.333	ENSMODG00000008091	SNRPF	66	69.333	Monodelphis_domestica
ENSANAG00000025860	-	82	67.123	ENSMALG00000012328	snrpf	86	67.123	Monopterus_albus
ENSANAG00000025860	-	85	69.333	MGP_CAROLIEiJ_G0015735	-	87	69.333	Mus_caroli
ENSANAG00000025860	-	85	69.333	ENSMUSG00000020018	Snrpf	87	69.333	Mus_musculus
ENSANAG00000025860	-	85	69.333	MGP_PahariEiJ_G0031350	Snrpf	87	69.333	Mus_pahari
ENSANAG00000025860	-	85	69.333	MGP_SPRETEiJ_G0016553	Snrpf	87	69.333	Mus_spretus
ENSANAG00000025860	-	85	69.333	ENSMPUG00000007176	-	67	69.333	Mustela_putorius_furo
ENSANAG00000025860	-	85	69.333	ENSMLUG00000029201	-	71	69.333	Myotis_lucifugus
ENSANAG00000025860	-	85	69.333	ENSMLUG00000026149	-	71	69.333	Myotis_lucifugus
ENSANAG00000025860	-	85	69.333	ENSMLUG00000027932	-	71	69.333	Myotis_lucifugus
ENSANAG00000025860	-	83	68.919	ENSMLUG00000013577	-	87	68.919	Myotis_lucifugus
ENSANAG00000025860	-	100	61.628	ENSMLUG00000026269	-	71	58.667	Myotis_lucifugus
ENSANAG00000025860	-	85	69.333	ENSNGAG00000024292	-	87	69.333	Nannospalax_galili
ENSANAG00000025860	-	78	58.571	ENSNGAG00000005851	-	79	56.716	Nannospalax_galili
ENSANAG00000025860	-	83	67.568	ENSNBRG00000011682	snrpf	76	67.568	Neolamprologus_brichardi
ENSANAG00000025860	-	85	69.333	ENSODEG00000010328	-	87	69.333	Octodon_degus
ENSANAG00000025860	-	85	68.000	ENSOCUG00000010925	SNRPF	65	68.919	Oryctolagus_cuniculus
ENSANAG00000025860	-	83	64.865	ENSORLG00020008216	snrpf	87	64.865	Oryzias_latipes_hni
ENSANAG00000025860	-	83	64.865	ENSORLG00015007418	snrpf	87	64.865	Oryzias_latipes_hsok
ENSANAG00000025860	-	82	65.753	ENSOMEG00000003018	snrpf	86	65.753	Oryzias_melastigma
ENSANAG00000025860	-	85	68.000	ENSOGAG00000030323	-	87	68.000	Otolemur_garnettii
ENSANAG00000025860	-	85	69.333	ENSOARG00000011853	-	65	69.333	Ovis_aries
ENSANAG00000025860	-	90	54.930	ENSPPAG00000037479	-	91	52.239	Pan_paniscus
ENSANAG00000025860	-	97	54.762	ENSPPAG00000037544	-	83	50.667	Pan_paniscus
ENSANAG00000025860	-	97	52.381	ENSPPRG00000007449	-	77	50.667	Panthera_pardus
ENSANAG00000025860	-	85	69.333	ENSPPRG00000005875	-	87	69.333	Panthera_pardus
ENSANAG00000025860	-	97	54.762	ENSPTIG00000005117	-	89	50.667	Panthera_tigris_altaica
ENSANAG00000025860	-	85	69.333	ENSPTIG00000007520	SNRPF	87	69.333	Panthera_tigris_altaica
ENSANAG00000025860	-	97	54.762	ENSPTRG00000043814	-	83	50.667	Pan_troglodytes
ENSANAG00000025860	-	90	56.338	ENSPTRG00000047717	-	91	53.731	Pan_troglodytes
ENSANAG00000025860	-	83	67.568	ENSPKIG00000014784	snrpf	81	67.568	Paramormyrops_kingsleyae
ENSANAG00000025860	-	83	68.919	ENSPSIG00000016462	SNRPF	87	68.000	Pelodiscus_sinensis
ENSANAG00000025860	-	83	66.216	ENSPMGG00000023548	snrpf	87	66.216	Periophthalmus_magnuspinnatus
ENSANAG00000025860	-	85	69.333	ENSPEMG00000023326	Snrpf	87	69.333	Peromyscus_maniculatus_bairdii
ENSANAG00000025860	-	82	67.123	ENSPLAG00000023932	snrpf	86	67.123	Poecilia_latipinna
ENSANAG00000025860	-	82	67.123	ENSPMEG00000003377	snrpf	86	67.123	Poecilia_mexicana
ENSANAG00000025860	-	82	67.123	ENSPREG00000022635	snrpf	84	67.123	Poecilia_reticulata
ENSANAG00000025860	-	85	69.333	ENSPPYG00000004847	-	87	69.333	Pongo_abelii
ENSANAG00000025860	-	85	69.333	ENSPCOG00000023833	-	87	69.333	Propithecus_coquereli
ENSANAG00000025860	-	85	69.333	ENSPVAG00000009036	SNRPF	87	69.333	Pteropus_vampyrus
ENSANAG00000025860	-	82	67.123	ENSPNYG00000021712	snrpf	86	67.123	Pundamilia_nyererei
ENSANAG00000025860	-	82	65.753	ENSPNAG00000019117	snrpf	86	65.753	Pygocentrus_nattereri
ENSANAG00000025860	-	85	69.333	ENSRNOG00000005556	Snrpf	87	69.333	Rattus_norvegicus
ENSANAG00000025860	-	85	68.000	ENSRBIG00000030414	-	87	68.000	Rhinopithecus_bieti
ENSANAG00000025860	-	85	68.000	ENSRROG00000021975	-	87	68.000	Rhinopithecus_roxellana
ENSANAG00000025860	-	78	45.070	YPR182W	SMX3	85	43.836	Saccharomyces_cerevisiae
ENSANAG00000025860	-	85	69.333	ENSSBOG00000012868	-	87	69.333	Saimiri_boliviensis_boliviensis
ENSANAG00000025860	-	85	76.119	ENSSBOG00000032297	-	86	76.119	Saimiri_boliviensis_boliviensis
ENSANAG00000025860	-	85	52.564	ENSSBOG00000027638	-	88	52.564	Saimiri_boliviensis_boliviensis
ENSANAG00000025860	-	85	69.333	ENSSBOG00000036179	-	87	69.333	Saimiri_boliviensis_boliviensis
ENSANAG00000025860	-	83	68.919	ENSSHAG00000012294	SNRPF	67	68.919	Sarcophilus_harrisii
ENSANAG00000025860	-	69	67.188	ENSSFOG00015021523	snrpf	96	67.188	Scleropages_formosus
ENSANAG00000025860	-	85	65.333	ENSSMAG00000005533	snrpf	86	65.333	Scophthalmus_maximus
ENSANAG00000025860	-	86	59.259	ENSSDUG00000016283	snrpf	77	67.692	Seriola_dumerili
ENSANAG00000025860	-	92	55.000	ENSSLDG00000003885	-	90	56.757	Seriola_lalandi_dorsalis
ENSANAG00000025860	-	85	66.667	ENSSLDG00000005119	snrpf	87	66.667	Seriola_lalandi_dorsalis
ENSANAG00000025860	-	82	68.493	ENSSPUG00000014590	-	86	68.493	Sphenodon_punctatus
ENSANAG00000025860	-	83	67.568	ENSSPAG00000003283	snrpf	84	67.568	Stegastes_partitus
ENSANAG00000025860	-	85	69.333	ENSSSCG00000000895	SNRPF	87	69.333	Sus_scrofa
ENSANAG00000025860	-	60	64.912	ENSTRUG00000014956	snrpf	83	64.912	Takifugu_rubripes
ENSANAG00000025860	-	85	68.000	ENSTNIG00000012672	snrpf	87	68.000	Tetraodon_nigroviridis
ENSANAG00000025860	-	85	69.333	ENSUAMG00000008176	-	87	69.333	Ursus_americanus
ENSANAG00000025860	-	100	61.628	ENSUAMG00000001101	-	88	61.333	Ursus_americanus
ENSANAG00000025860	-	85	69.333	ENSUMAG00000003528	-	87	69.333	Ursus_maritimus
ENSANAG00000025860	-	85	61.333	ENSUMAG00000006177	-	88	61.333	Ursus_maritimus
ENSANAG00000025860	-	85	69.333	ENSVPAG00000008712	-	87	69.333	Vicugna_pacos
ENSANAG00000025860	-	89	69.231	ENSVVUG00000023821	-	96	68.000	Vulpes_vulpes
ENSANAG00000025860	-	83	55.263	ENSXETG00000021630	snrpf	87	55.263	Xenopus_tropicalis
ENSANAG00000025860	-	82	67.123	ENSXCOG00000013860	snrpf	84	67.123	Xiphophorus_couchianus
ENSANAG00000025860	-	82	67.123	ENSXMAG00000015448	snrpf	86	67.123	Xiphophorus_maculatus