EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000027537 (Gene tree)
Gene ID: 105707131
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 9875 bases
Position: chrKZ203424.1:3223727-3233601
Accession: 105707131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000019489	RRM_1	PF00076.22	8.2e-18	1	1
ENSANAP00000019486	RRM_1	PF00076.22	9.1e-18	1	1
ENSANAP00000019484	RRM_1	PF00076.22	9.9e-18	1	1
ENSANAP00000019500	RRM_1	PF00076.22	8.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000037362	RBM42-203	1272	-	ENSANAP00000019489	423 (aa)	-	A0A2K5DEU9
ENSANAT00000037358	RBM42-202	1368	XM_012437957	ENSANAP00000019486	455 (aa)	XP_012293380	A0A2K5DEY2
ENSANAT00000037356	RBM42-201	1434	XM_012437949	ENSANAP00000019484	477 (aa)	XP_012293372	A0A2K5DEU4
ENSANAT00000037365	RBM42-204	1152	-	ENSANAP00000019492	383 (aa)	-	A0A2K5DEW8
ENSANAT00000037373	RBM42-205	546	-	ENSANAP00000019500	181 (aa)	-	A0A2K5DEZ1

Gene Model

Click here to download ENSANAG00000027537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000027537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000027537	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSANAG00000027537	RBM42	100	97.495	ENSAMEG00000000524	RBM42	100	97.495	Ailuropoda_melanoleuca
ENSANAG00000027537	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.462	Bos_taurus
ENSANAG00000027537	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSANAG00000027537	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSANAG00000027537	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.275	Capra_hircus
ENSANAG00000027537	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSANAG00000027537	RBM42	81	97.927	ENSCAPG00000009566	RBM42	99	97.927	Cavia_aperea
ENSANAG00000027537	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.484	Cavia_porcellus
ENSANAG00000027537	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSANAG00000027537	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSANAG00000027537	RBM42	100	96.855	ENSCLAG00000012865	RBM42	99	96.855	Chinchilla_lanigera
ENSANAG00000027537	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	96.943	Chlorocebus_sabaeus
ENSANAG00000027537	RBM42	100	88.470	ENSCANG00000030272	RBM42	100	88.470	Colobus_angolensis_palliatus
ENSANAG00000027537	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.065	Cricetulus_griseus_chok1gshd
ENSANAG00000027537	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	96.667	Dasypus_novemcinctus
ENSANAG00000027537	RBM42	100	97.065	ENSDORG00000013001	Rbm42	99	97.065	Dipodomys_ordii
ENSANAG00000027537	RBM42	93	89.855	ENSETEG00000007878	RBM42	74	89.855	Echinops_telfairi
ENSANAG00000027537	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	96.484	Equus_asinus_asinus
ENSANAG00000027537	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	96.484	Equus_caballus
ENSANAG00000027537	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSANAG00000027537	RBM42	100	95.825	ENSFDAG00000007440	RBM42	99	95.825	Fukomys_damarensis
ENSANAG00000027537	RBM42	73	97.183	ENSGAGG00000014805	RBM42	50	92.086	Gopherus_agassizii
ENSANAG00000027537	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSANAG00000027537	RBM42	96	100.000	ENSHGLG00000008418	RBM42	99	94.969	Heterocephalus_glaber_female
ENSANAG00000027537	RBM42	96	100.000	ENSHGLG00100018667	RBM42	99	94.969	Heterocephalus_glaber_male
ENSANAG00000027537	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	96.646	Ictidomys_tridecemlineatus
ENSANAG00000027537	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.436	Jaculus_jaculus
ENSANAG00000027537	RBM42	98	93.162	ENSLAFG00000014993	RBM42	99	91.614	Loxodonta_africana
ENSANAG00000027537	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSANAG00000027537	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSANAG00000027537	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSANAG00000027537	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSANAG00000027537	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSANAG00000027537	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	96.436	Microtus_ochrogaster
ENSANAG00000027537	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	81.237	Monodelphis_domestica
ENSANAG00000027537	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.065	Mus_caroli
ENSANAG00000027537	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.065	Mus_musculus
ENSANAG00000027537	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.065	Mus_pahari
ENSANAG00000027537	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.065	Mus_spretus
ENSANAG00000027537	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	96.703	Mustela_putorius_furo
ENSANAG00000027537	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	96.646	Myotis_lucifugus
ENSANAG00000027537	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.646	Nannospalax_galili
ENSANAG00000027537	RBM42	85	86.339	ENSNLEG00000011272	-	94	92.179	Nomascus_leucogenys
ENSANAG00000027537	RBM42	96	81.818	ENSMEUG00000016300	RBM42	100	81.070	Notamacropus_eugenii
ENSANAG00000027537	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	92.662	Ochotona_princeps
ENSANAG00000027537	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.065	Octodon_degus
ENSANAG00000027537	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	95.633	Oryctolagus_cuniculus
ENSANAG00000027537	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.275	Otolemur_garnettii
ENSANAG00000027537	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	92.437	Ovis_aries
ENSANAG00000027537	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSANAG00000027537	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSANAG00000027537	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSANAG00000027537	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSANAG00000027537	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSANAG00000027537	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.484	Peromyscus_maniculatus_bairdii
ENSANAG00000027537	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	81.649	Phascolarctos_cinereus
ENSANAG00000027537	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	97.526	Pongo_abelii
ENSANAG00000027537	RBM42	100	92.308	ENSPCAG00000013053	RBM42	100	82.390	Procavia_capensis
ENSANAG00000027537	RBM42	97	76.279	ENSPCOG00000020672	RBM42	81	98.799	Propithecus_coquereli
ENSANAG00000027537	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSANAG00000027537	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	97.484	Pteropus_vampyrus
ENSANAG00000027537	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.275	Rattus_norvegicus
ENSANAG00000027537	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSANAG00000027537	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSANAG00000027537	RBM42	90	99.211	ENSSBOG00000030666	RBM42	100	99.261	Saimiri_boliviensis_boliviensis
ENSANAG00000027537	RBM42	100	87.083	ENSSARG00000010724	RBM42	100	87.083	Sorex_araneus
ENSANAG00000027537	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	98.345	Sus_scrofa
ENSANAG00000027537	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	97.694	Ursus_americanus
ENSANAG00000027537	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	97.802	Ursus_maritimus
ENSANAG00000027537	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	96.484	Vulpes_vulpes