EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000027865 (Gene tree)
Gene ID: 105708460
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 145231 bases
Position: chrKZ207330.1:17093923-17239153
Accession: 105708460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	1	8
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	2	8
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	3	8
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	4	8
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	5	8
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	6	8
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	7	8
ENSANAP00000020572	PUF	PF00806.19	3.4e-71	8	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	1	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	2	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	3	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	4	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	5	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	6	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	7	8
ENSANAP00000020518	PUF	PF00806.19	1.4e-70	8	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	1	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	2	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	3	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	4	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	5	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	6	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	7	8
ENSANAP00000020535	PUF	PF00806.19	1.6e-70	8	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	1	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	2	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	3	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	4	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	5	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	6	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	7	8
ENSANAP00000020515	PUF	PF00806.19	2.6e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000038469	PUM1-206	1218	-	ENSANAP00000020591	405 (aa)	-	A0A2K5DHZ6
ENSANAT00000038463	PUM1-205	1545	-	ENSANAP00000020585	514 (aa)	-	A0A2K5DHW9
ENSANAT00000038450	PUM1-204	2835	-	ENSANAP00000020572	944 (aa)	-	A0A2K5DI22
ENSANAT00000038396	PUM1-202	5689	XM_012439859	ENSANAP00000020518	1108 (aa)	XP_012295282	A0A2K5DHV7
ENSANAT00000038413	PUM1-203	3384	XM_012439861	ENSANAP00000020535	1127 (aa)	XP_012295284	A0A2K5DHS8
ENSANAT00000038393	PUM1-201	5926	XM_012439856	ENSANAP00000020515	1187 (aa)	XP_012295279	A0A2K5DHR1

Gene Model

Click here to download ENSANAG00000027865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000027865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000027865	PUM1	86	87.529	ENSANAG00000021807	PUM2	100	89.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000027865	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSANAG00000027865	PUM1	90	91.768	ENSAPOG00000021632	pum1	100	91.283	Acanthochromis_polyacanthus
ENSANAG00000027865	PUM1	100	100.000	ENSAMEG00000017656	PUM1	97	99.160	Ailuropoda_melanoleuca
ENSANAG00000027865	PUM1	100	81.188	ENSACIG00000021013	pum1	93	90.361	Amphilophus_citrinellus
ENSANAG00000027865	PUM1	90	91.768	ENSAOCG00000003944	pum1	100	79.279	Amphiprion_ocellaris
ENSANAG00000027865	PUM1	90	91.768	ENSAPEG00000014550	pum1	100	79.279	Amphiprion_percula
ENSANAG00000027865	PUM1	100	91.325	ENSATEG00000016004	pum1	100	91.283	Anabas_testudineus
ENSANAG00000027865	PUM1	100	98.068	ENSAPLG00000009351	PUM1	100	97.393	Anas_platyrhynchos
ENSANAG00000027865	PUM1	100	98.068	ENSACAG00000000682	PUM1	98	95.627	Anolis_carolinensis
ENSANAG00000027865	PUM1	90	76.481	ENSACLG00000019354	pum1	100	78.743	Astatotilapia_calliptera
ENSANAG00000027865	PUM1	100	84.367	ENSAMXG00000020607	pum1	92	92.512	Astyanax_mexicanus
ENSANAG00000027865	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSANAG00000027865	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSANAG00000027865	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	96.972	Canis_familiaris
ENSANAG00000027865	PUM1	92	97.436	ENSCAFG00020024616	PUM1	98	99.515	Canis_lupus_dingo
ENSANAG00000027865	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.515	Capra_hircus
ENSANAG00000027865	PUM1	100	99.470	ENSTSYG00000008868	PUM1	100	99.470	Carlito_syrichta
ENSANAG00000027865	PUM1	100	99.306	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSANAG00000027865	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSANAG00000027865	PUM1	100	99.306	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSANAG00000027865	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	98.667	Chlorocebus_sabaeus
ENSANAG00000027865	PUM1	99	96.121	ENSCHOG00000010245	PUM1	93	96.121	Choloepus_hoffmanni
ENSANAG00000027865	PUM1	100	97.826	ENSCPBG00000009288	PUM1	100	98.301	Chrysemys_picta_bellii
ENSANAG00000027865	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSANAG00000027865	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSANAG00000027865	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSANAG00000027865	PUM1	90	76.252	ENSCSEG00000015981	pum1	100	77.850	Cynoglossus_semilaevis
ENSANAG00000027865	PUM1	100	80.693	ENSCVAG00000007043	pum1	100	75.557	Cyprinodon_variegatus
ENSANAG00000027865	PUM1	100	92.754	ENSDARG00000099256	pum1	95	93.421	Danio_rerio
ENSANAG00000027865	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	98.823	Dasypus_novemcinctus
ENSANAG00000027865	PUM1	89	98.381	ENSDORG00000001875	Pum1	100	99.272	Dipodomys_ordii
ENSANAG00000027865	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.561	Echinops_telfairi
ENSANAG00000027865	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	98.907	Equus_asinus_asinus
ENSANAG00000027865	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	98.907	Equus_caballus
ENSANAG00000027865	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSANAG00000027865	PUM1	100	83.354	ENSELUG00000002409	pum1	93	92.995	Esox_lucius
ENSANAG00000027865	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSANAG00000027865	PUM1	100	98.068	ENSFALG00000001214	PUM1	97	96.064	Ficedula_albicollis
ENSANAG00000027865	PUM1	100	99.306	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSANAG00000027865	PUM1	91	90.843	ENSGMOG00000010491	pum1	94	90.361	Gadus_morhua
ENSANAG00000027865	PUM1	100	98.068	ENSGALG00000042598	PUM1	100	97.621	Gallus_gallus
ENSANAG00000027865	PUM1	100	80.817	ENSGAFG00000015617	pum1	100	90.557	Gambusia_affinis
ENSANAG00000027865	PUM1	100	80.911	ENSGACG00000005717	pum1	100	76.359	Gasterosteus_aculeatus
ENSANAG00000027865	PUM1	100	97.826	ENSGAGG00000001290	PUM1	100	97.140	Gopherus_agassizii
ENSANAG00000027865	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSANAG00000027865	PUM1	100	80.941	ENSHBUG00000018718	pum1	100	76.135	Haplochromis_burtoni
ENSANAG00000027865	PUM1	100	98.738	ENSHGLG00000013819	Pum1	100	98.738	Heterocephalus_glaber_female
ENSANAG00000027865	PUM1	100	98.738	ENSHGLG00100008621	Pum1	100	98.738	Heterocephalus_glaber_male
ENSANAG00000027865	PUM1	100	91.787	ENSIPUG00000020421	pum1	93	91.787	Ictalurus_punctatus
ENSANAG00000027865	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSANAG00000027865	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSANAG00000027865	PUM1	100	80.322	ENSKMAG00000003481	pum1	100	75.723	Kryptolebias_marmoratus
ENSANAG00000027865	PUM1	100	91.325	ENSLBEG00000002527	pum1	93	90.843	Labrus_bergylta
ENSANAG00000027865	PUM1	100	88.600	ENSLACG00000017188	PUM1	99	86.428	Latimeria_chalumnae
ENSANAG00000027865	PUM1	100	96.135	ENSLOCG00000005210	pum1	95	96.135	Lepisosteus_oculatus
ENSANAG00000027865	PUM1	100	98.570	ENSLAFG00000003178	PUM1	100	98.570	Loxodonta_africana
ENSANAG00000027865	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSANAG00000027865	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSANAG00000027865	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSANAG00000027865	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSANAG00000027865	PUM1	100	91.084	ENSMAMG00000011606	pum1	93	90.602	Mastacembelus_armatus
ENSANAG00000027865	PUM1	100	80.941	ENSMZEG00005005834	pum1	100	76.135	Maylandia_zebra
ENSANAG00000027865	PUM1	100	98.068	ENSMGAG00000000724	PUM1	100	97.347	Meleagris_gallopavo
ENSANAG00000027865	PUM1	100	99.306	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSANAG00000027865	PUM1	100	99.576	ENSMICG00000007713	-	100	99.576	Microcebus_murinus
ENSANAG00000027865	PUM1	100	96.931	ENSMICG00000012213	-	100	96.931	Microcebus_murinus
ENSANAG00000027865	PUM1	100	98.738	ENSMOCG00000015463	Pum1	100	98.738	Microtus_ochrogaster
ENSANAG00000027865	PUM1	90	88.453	ENSMMOG00000019817	pum1	100	91.041	Mola_mola
ENSANAG00000027865	PUM1	100	97.397	ENSMODG00000017067	PUM1	100	97.397	Monodelphis_domestica
ENSANAG00000027865	PUM1	90	88.684	ENSMALG00000016399	pum1	100	91.283	Monopterus_albus
ENSANAG00000027865	PUM1	100	99.029	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSANAG00000027865	PUM1	100	99.306	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSANAG00000027865	PUM1	100	99.306	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSANAG00000027865	PUM1	100	99.306	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSANAG00000027865	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	98.991	Mustela_putorius_furo
ENSANAG00000027865	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	99.158	Myotis_lucifugus
ENSANAG00000027865	PUM1	100	99.364	ENSNGAG00000002378	Pum1	100	99.364	Nannospalax_galili
ENSANAG00000027865	PUM1	100	78.347	ENSNBRG00000010689	pum1	100	83.436	Neolamprologus_brichardi
ENSANAG00000027865	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSANAG00000027865	PUM1	84	96.959	ENSMEUG00000000976	-	82	96.959	Notamacropus_eugenii
ENSANAG00000027865	PUM1	84	100.000	ENSOPRG00000001776	PUM1	72	100.000	Ochotona_princeps
ENSANAG00000027865	PUM1	100	98.835	ENSODEG00000003465	PUM1	100	98.835	Octodon_degus
ENSANAG00000027865	PUM1	100	91.084	ENSONIG00000002290	pum1	93	90.602	Oreochromis_niloticus
ENSANAG00000027865	PUM1	80	83.654	ENSOANG00000004902	-	100	78.074	Ornithorhynchus_anatinus
ENSANAG00000027865	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.989	Oryctolagus_cuniculus
ENSANAG00000027865	PUM1	100	81.807	ENSORLG00000011482	pum1	94	90.361	Oryzias_latipes
ENSANAG00000027865	PUM1	100	81.931	ENSORLG00020019461	pum1	100	75.802	Oryzias_latipes_hni
ENSANAG00000027865	PUM1	100	81.931	ENSORLG00015011375	pum1	100	75.885	Oryzias_latipes_hsok
ENSANAG00000027865	PUM1	90	92.978	ENSOMEG00000009312	pum1	100	76.747	Oryzias_melastigma
ENSANAG00000027865	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.558	Otolemur_garnettii
ENSANAG00000027865	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.515	Ovis_aries
ENSANAG00000027865	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSANAG00000027865	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSANAG00000027865	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSANAG00000027865	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSANAG00000027865	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSANAG00000027865	PUM1	100	82.742	ENSPKIG00000010578	pum1	100	78.299	Paramormyrops_kingsleyae
ENSANAG00000027865	PUM1	100	98.005	ENSPSIG00000014118	PUM1	100	97.752	Pelodiscus_sinensis
ENSANAG00000027865	PUM1	100	76.715	ENSPMGG00000005836	pum1	100	81.885	Periophthalmus_magnuspinnatus
ENSANAG00000027865	PUM1	100	99.306	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSANAG00000027865	PUM1	100	97.637	ENSPCIG00000014151	PUM1	100	97.516	Phascolarctos_cinereus
ENSANAG00000027865	PUM1	94	90.602	ENSPFOG00000007289	pum1	93	90.120	Poecilia_formosa
ENSANAG00000027865	PUM1	100	90.602	ENSPLAG00000007256	pum1	93	90.120	Poecilia_latipinna
ENSANAG00000027865	PUM1	85	82.840	ENSPMEG00000019543	pum1	99	78.125	Poecilia_mexicana
ENSANAG00000027865	PUM1	100	80.817	ENSPREG00000005195	pum1	100	80.947	Poecilia_reticulata
ENSANAG00000027865	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	97.527	Pongo_abelii
ENSANAG00000027865	PUM1	85	98.765	ENSPCAG00000001979	PUM1	76	98.765	Procavia_capensis
ENSANAG00000027865	PUM1	100	99.576	ENSPCOG00000004398	PUM1	100	99.576	Propithecus_coquereli
ENSANAG00000027865	PUM1	100	100.000	ENSPVAG00000005207	PUM1	97	96.972	Pteropus_vampyrus
ENSANAG00000027865	PUM1	100	80.941	ENSPNYG00000009518	pum1	100	81.598	Pundamilia_nyererei
ENSANAG00000027865	PUM1	100	92.754	ENSPNAG00000026728	pum1	95	92.754	Pygocentrus_nattereri
ENSANAG00000027865	PUM1	100	99.306	ENSRNOG00000011709	Pum1	100	98.821	Rattus_norvegicus
ENSANAG00000027865	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSANAG00000027865	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSANAG00000027865	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000027865	PUM1	100	97.388	ENSSHAG00000010918	PUM1	100	97.313	Sarcophilus_harrisii
ENSANAG00000027865	PUM1	100	91.325	ENSSMAG00000010918	pum1	100	91.283	Scophthalmus_maximus
ENSANAG00000027865	PUM1	100	91.325	ENSSDUG00000009021	pum1	93	90.843	Seriola_dumerili
ENSANAG00000027865	PUM1	95	91.325	ENSSLDG00000009667	pum1	92	90.843	Seriola_lalandi_dorsalis
ENSANAG00000027865	PUM1	99	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSANAG00000027865	PUM1	100	98.068	ENSSPUG00000006267	PUM1	100	96.804	Sphenodon_punctatus
ENSANAG00000027865	PUM1	90	91.768	ENSSPAG00000016636	pum1	100	79.279	Stegastes_partitus
ENSANAG00000027865	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSANAG00000027865	PUM1	100	91.325	ENSTRUG00000013121	pum1	93	90.843	Takifugu_rubripes
ENSANAG00000027865	PUM1	100	91.106	ENSTNIG00000016983	pum1	93	90.625	Tetraodon_nigroviridis
ENSANAG00000027865	PUM1	93	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSANAG00000027865	PUM1	92	99.088	ENSTTRG00000007436	PUM1	90	99.088	Tursiops_truncatus
ENSANAG00000027865	PUM1	99	99.077	ENSUAMG00000018262	-	100	99.077	Ursus_americanus
ENSANAG00000027865	PUM1	100	99.099	ENSUMAG00000009211	PUM1	100	99.099	Ursus_maritimus
ENSANAG00000027865	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSANAG00000027865	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.243	Vulpes_vulpes
ENSANAG00000027865	PUM1	100	88.696	ENSXETG00000012904	pum1	99	86.482	Xenopus_tropicalis
ENSANAG00000027865	PUM1	100	80.817	ENSXMAG00000002945	pum1	100	77.743	Xiphophorus_maculatus