EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000028114 (Gene tree)
Gene ID: 105711589
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 80574 bases
Position: chrKZ206965.1:11775943-11856516
Accession: 105711589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000020673	EST1	PF10374.9	8.8e-25	1	1
ENSANAP00000020671	EST1	PF10374.9	1.1e-24	1	1
ENSANAP00000020672	EST1	PF10374.9	1.1e-24	1	1
ENSANAP00000020675	EST1	PF10374.9	1.1e-24	1	1
ENSANAP00000020684	EST1	PF10374.9	2.8e-22	1	1
ENSANAP00000020673	EST1_DNA_bind	PF10373.9	1.3e-55	1	1
ENSANAP00000020671	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSANAP00000020672	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSANAP00000020675	EST1_DNA_bind	PF10373.9	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000038568	SMG7-206	219	-	ENSANAP00000020686	73 (aa)	-	A0A2K5DIA4
ENSANAT00000038566	SMG7-205	555	-	ENSANAP00000020684	184 (aa)	-	A0A2K5DIC3
ENSANAT00000038555	SMG7-203	3411	XM_012444366	ENSANAP00000020673	1136 (aa)	XP_012299789	A0A2K5DIB8
ENSANAT00000038554	SMG7-202	3561	XM_012444359	ENSANAP00000020672	1186 (aa)	XP_012299782	A0A2K5DIC0
ENSANAT00000038557	SMG7-204	3648	XM_012444357	ENSANAP00000020675	1215 (aa)	XP_012299780	A0A2K5DI61
ENSANAT00000038553	SMG7-201	3528	-	ENSANAP00000020671	1176 (aa)	-	A0A2K5DI88

Gene Model

Click here to download ENSANAG00000028114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000028114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000028114	SMG7	100	98.593	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSANAG00000028114	SMG7	86	93.038	ENSAPOG00000009611	smg7	95	74.433	Acanthochromis_polyacanthus
ENSANAG00000028114	SMG7	99	96.723	ENSAMEG00000002357	SMG7	100	96.681	Ailuropoda_melanoleuca
ENSANAG00000028114	SMG7	70	94.574	ENSACIG00000015152	smg7	97	67.580	Amphilophus_citrinellus
ENSANAG00000028114	SMG7	85	92.994	ENSAOCG00000013538	smg7	99	66.638	Amphiprion_ocellaris
ENSANAG00000028114	SMG7	85	92.994	ENSAPEG00000007851	smg7	99	66.638	Amphiprion_percula
ENSANAG00000028114	SMG7	90	90.303	ENSATEG00000006931	smg7	99	65.957	Anabas_testudineus
ENSANAG00000028114	SMG7	100	89.229	ENSAPLG00000015811	SMG7	100	89.054	Anas_platyrhynchos
ENSANAG00000028114	SMG7	100	87.886	ENSACAG00000014989	SMG7	100	88.388	Anolis_carolinensis
ENSANAG00000028114	SMG7	85	94.231	ENSACLG00000022079	smg7	99	66.038	Astatotilapia_calliptera
ENSANAG00000028114	SMG7	84	94.194	ENSAMXG00000020809	smg7	99	67.943	Astyanax_mexicanus
ENSANAG00000028114	SMG7	100	95.690	ENSBTAG00000008003	SMG7	100	95.690	Bos_taurus
ENSANAG00000028114	SMG7	100	98.768	ENSCJAG00000005135	SMG7	100	98.768	Callithrix_jacchus
ENSANAG00000028114	SMG7	100	93.421	ENSCAFG00000013276	SMG7	100	93.421	Canis_familiaris
ENSANAG00000028114	SMG7	99	98.361	ENSCAFG00020015475	SMG7	98	98.361	Canis_lupus_dingo
ENSANAG00000028114	SMG7	99	92.119	ENSCHIG00000018192	SMG7	96	95.807	Capra_hircus
ENSANAG00000028114	SMG7	100	97.098	ENSTSYG00000002667	SMG7	100	97.098	Carlito_syrichta
ENSANAG00000028114	SMG7	99	93.564	ENSCPOG00000008906	SMG7	100	93.564	Cavia_porcellus
ENSANAG00000028114	SMG7	100	99.120	ENSCCAG00000028596	SMG7	100	99.126	Cebus_capucinus
ENSANAG00000028114	SMG7	100	98.913	ENSCATG00000011063	SMG7	100	98.913	Cercocebus_atys
ENSANAG00000028114	SMG7	100	96.394	ENSCLAG00000010751	SMG7	100	96.394	Chinchilla_lanigera
ENSANAG00000028114	SMG7	100	94.901	ENSCSAG00000012654	SMG7	100	94.901	Chlorocebus_sabaeus
ENSANAG00000028114	SMG7	95	87.645	ENSCHOG00000010522	SMG7	98	88.395	Choloepus_hoffmanni
ENSANAG00000028114	SMG7	100	92.191	ENSCPBG00000015724	SMG7	100	92.024	Chrysemys_picta_bellii
ENSANAG00000028114	SMG7	85	51.829	ENSCING00000006953	-	94	53.746	Ciona_intestinalis
ENSANAG00000028114	SMG7	100	98.370	ENSCANG00000015680	SMG7	100	98.690	Colobus_angolensis_palliatus
ENSANAG00000028114	SMG7	100	94.811	ENSCGRG00001013705	Smg7	100	94.811	Cricetulus_griseus_chok1gshd
ENSANAG00000028114	SMG7	99	94.765	ENSCGRG00000018401	Smg7	100	94.765	Cricetulus_griseus_crigri
ENSANAG00000028114	SMG7	85	89.172	ENSCSEG00000007392	-	89	89.172	Cynoglossus_semilaevis
ENSANAG00000028114	SMG7	80	88.000	ENSCVAG00000011842	smg7	98	68.500	Cyprinodon_variegatus
ENSANAG00000028114	SMG7	84	94.839	ENSDARG00000060767	smg7	99	67.606	Danio_rerio
ENSANAG00000028114	SMG7	100	92.418	ENSDORG00000007331	Smg7	97	96.014	Dipodomys_ordii
ENSANAG00000028114	SMG7	94	96.014	ENSETEG00000002654	SMG7	100	96.014	Echinops_telfairi
ENSANAG00000028114	SMG7	100	93.832	ENSEASG00005006524	SMG7	97	97.464	Equus_asinus_asinus
ENSANAG00000028114	SMG7	100	93.914	ENSECAG00000004313	SMG7	97	97.554	Equus_caballus
ENSANAG00000028114	SMG7	99	93.452	ENSEEUG00000002024	SMG7	99	93.793	Erinaceus_europaeus
ENSANAG00000028114	SMG7	85	94.268	ENSELUG00000010293	smg7	99	66.667	Esox_lucius
ENSANAG00000028114	SMG7	100	93.513	ENSFCAG00000010900	SMG7	97	97.583	Felis_catus
ENSANAG00000028114	SMG7	98	86.553	ENSFALG00000003047	SMG7	100	86.468	Ficedula_albicollis
ENSANAG00000028114	SMG7	99	92.658	ENSFDAG00000012121	SMG7	96	96.682	Fukomys_damarensis
ENSANAG00000028114	SMG7	85	89.809	ENSFHEG00000011073	smg7	99	63.939	Fundulus_heteroclitus
ENSANAG00000028114	SMG7	85	90.446	ENSGMOG00000004916	smg7	89	73.823	Gadus_morhua
ENSANAG00000028114	SMG7	100	89.764	ENSGALG00000004667	SMG7	100	89.589	Gallus_gallus
ENSANAG00000028114	SMG7	95	85.475	ENSGAFG00000019000	smg7	99	64.372	Gambusia_affinis
ENSANAG00000028114	SMG7	85	91.720	ENSGACG00000001634	smg7	99	64.581	Gasterosteus_aculeatus
ENSANAG00000028114	SMG7	97	87.363	ENSGAGG00000024208	-	94	87.363	Gopherus_agassizii
ENSANAG00000028114	SMG7	100	98.505	ENSGGOG00000002342	SMG7	100	98.515	Gorilla_gorilla
ENSANAG00000028114	SMG7	86	93.038	ENSHBUG00000003726	smg7	95	72.589	Haplochromis_burtoni
ENSANAG00000028114	SMG7	100	96.834	ENSHGLG00000009353	SMG7	100	96.834	Heterocephalus_glaber_female
ENSANAG00000028114	SMG7	94	89.040	ENSHGLG00100004878	-	97	89.040	Heterocephalus_glaber_male
ENSANAG00000028114	SMG7	100	96.922	ENSHGLG00100009637	-	100	96.922	Heterocephalus_glaber_male
ENSANAG00000028114	SMG7	98	76.923	ENSHCOG00000012804	-	91	81.871	Hippocampus_comes
ENSANAG00000028114	SMG7	84	94.194	ENSIPUG00000016997	smg7	99	68.645	Ictalurus_punctatus
ENSANAG00000028114	SMG7	100	94.019	ENSSTOG00000000401	SMG7	97	97.736	Ictidomys_tridecemlineatus
ENSANAG00000028114	SMG7	96	85.311	ENSJJAG00000000309	-	100	85.311	Jaculus_jaculus
ENSANAG00000028114	SMG7	100	91.821	ENSJJAG00000012351	Smg7	97	95.467	Jaculus_jaculus
ENSANAG00000028114	SMG7	72	93.182	ENSKMAG00000004900	smg7	100	62.292	Kryptolebias_marmoratus
ENSANAG00000028114	SMG7	52	62.667	ENSLBEG00000005220	-	75	64.273	Labrus_bergylta
ENSANAG00000028114	SMG7	86	91.195	ENSLBEG00000002983	smg7	99	66.149	Labrus_bergylta
ENSANAG00000028114	SMG7	90	90.964	ENSLACG00000000972	SMG7	99	75.521	Latimeria_chalumnae
ENSANAG00000028114	SMG7	86	94.340	ENSLOCG00000002010	smg7	99	70.175	Lepisosteus_oculatus
ENSANAG00000028114	SMG7	99	93.124	ENSLAFG00000008186	SMG7	100	93.138	Loxodonta_africana
ENSANAG00000028114	SMG7	100	98.913	ENSMFAG00000031653	SMG7	100	98.913	Macaca_fascicularis
ENSANAG00000028114	SMG7	99	97.964	ENSMMUG00000018458	SMG7	100	97.793	Macaca_mulatta
ENSANAG00000028114	SMG7	100	98.913	ENSMNEG00000034798	SMG7	100	98.913	Macaca_nemestrina
ENSANAG00000028114	SMG7	100	98.769	ENSMLEG00000037170	SMG7	100	98.777	Mandrillus_leucophaeus
ENSANAG00000028114	SMG7	85	92.357	ENSMAMG00000018733	smg7	85	65.463	Mastacembelus_armatus
ENSANAG00000028114	SMG7	85	94.231	ENSMZEG00005015247	smg7	99	65.628	Maylandia_zebra
ENSANAG00000028114	SMG7	97	89.568	ENSMGAG00000001561	SMG7	98	89.388	Meleagris_gallopavo
ENSANAG00000028114	SMG7	100	95.075	ENSMAUG00000019484	Smg7	100	95.075	Mesocricetus_auratus
ENSANAG00000028114	SMG7	100	98.065	ENSMICG00000007145	SMG7	100	98.065	Microcebus_murinus
ENSANAG00000028114	SMG7	100	95.075	ENSMOCG00000020748	Smg7	100	95.075	Microtus_ochrogaster
ENSANAG00000028114	SMG7	88	89.441	ENSMMOG00000001524	smg7	99	64.731	Mola_mola
ENSANAG00000028114	SMG7	92	92.979	ENSMODG00000007139	SMG7	99	92.979	Monodelphis_domestica
ENSANAG00000028114	SMG7	85	92.994	ENSMALG00000000061	smg7	93	68.159	Monopterus_albus
ENSANAG00000028114	SMG7	100	94.723	MGP_CAROLIEiJ_G0014704	Smg7	100	94.459	Mus_caroli
ENSANAG00000028114	SMG7	100	94.635	ENSMUSG00000042772	Smg7	100	94.635	Mus_musculus
ENSANAG00000028114	SMG7	100	94.723	MGP_PahariEiJ_G0027940	Smg7	100	94.723	Mus_pahari
ENSANAG00000028114	SMG7	100	94.723	MGP_SPRETEiJ_G0015511	Smg7	100	94.723	Mus_spretus
ENSANAG00000028114	SMG7	98	93.236	ENSMPUG00000011732	SMG7	94	96.959	Mustela_putorius_furo
ENSANAG00000028114	SMG7	99	92.621	ENSMLUG00000015417	SMG7	96	96.259	Myotis_lucifugus
ENSANAG00000028114	SMG7	100	95.954	ENSNGAG00000009836	Smg7	100	95.427	Nannospalax_galili
ENSANAG00000028114	SMG7	98	61.010	ENSNBRG00000024343	smg7	96	70.476	Neolamprologus_brichardi
ENSANAG00000028114	SMG7	100	98.769	ENSNLEG00000018018	SMG7	100	98.777	Nomascus_leucogenys
ENSANAG00000028114	SMG7	81	86.704	ENSMEUG00000004681	SMG7	73	93.496	Notamacropus_eugenii
ENSANAG00000028114	SMG7	85	96.178	ENSOPRG00000013942	SMG7	96	84.196	Ochotona_princeps
ENSANAG00000028114	SMG7	100	96.834	ENSODEG00000010390	SMG7	100	96.834	Octodon_degus
ENSANAG00000028114	SMG7	84	94.194	ENSONIG00000000277	smg7	99	65.579	Oreochromis_niloticus
ENSANAG00000028114	SMG7	98	87.564	ENSOANG00000000994	SMG7	97	90.926	Ornithorhynchus_anatinus
ENSANAG00000028114	SMG7	100	86.020	ENSOCUG00000005887	SMG7	95	86.184	Oryctolagus_cuniculus
ENSANAG00000028114	SMG7	98	82.778	ENSORLG00000007314	smg7	82	82.778	Oryzias_latipes
ENSANAG00000028114	SMG7	87	89.375	ENSORLG00020015779	smg7	82	81.967	Oryzias_latipes_hni
ENSANAG00000028114	SMG7	90	87.273	ENSORLG00015012289	smg7	97	66.170	Oryzias_latipes_hsok
ENSANAG00000028114	SMG7	85	91.083	ENSOMEG00000002328	smg7	99	63.180	Oryzias_melastigma
ENSANAG00000028114	SMG7	99	93.798	ENSOGAG00000003107	SMG7	99	94.229	Otolemur_garnettii
ENSANAG00000028114	SMG7	100	92.188	ENSOARG00000001352	SMG7	100	92.188	Ovis_aries
ENSANAG00000028114	SMG7	100	99.457	ENSPPAG00000031619	SMG7	100	99.457	Pan_paniscus
ENSANAG00000028114	SMG7	100	97.537	ENSPPRG00000011222	SMG7	100	97.537	Panthera_pardus
ENSANAG00000028114	SMG7	96	97.467	ENSPTIG00000007242	SMG7	100	97.467	Panthera_tigris_altaica
ENSANAG00000028114	SMG7	100	98.769	ENSPTRG00000001764	SMG7	100	98.777	Pan_troglodytes
ENSANAG00000028114	SMG7	100	98.769	ENSPANG00000004520	SMG7	100	98.769	Papio_anubis
ENSANAG00000028114	SMG7	89	89.024	ENSPKIG00000007242	smg7	99	68.000	Paramormyrops_kingsleyae
ENSANAG00000028114	SMG7	98	90.804	ENSPSIG00000012201	SMG7	100	90.536	Pelodiscus_sinensis
ENSANAG00000028114	SMG7	57	58.163	ENSPMGG00000021833	smg7	79	70.796	Periophthalmus_magnuspinnatus
ENSANAG00000028114	SMG7	86	86.076	ENSPMGG00000002179	-	93	81.065	Periophthalmus_magnuspinnatus
ENSANAG00000028114	SMG7	100	91.238	ENSPEMG00000011315	Smg7	97	94.837	Peromyscus_maniculatus_bairdii
ENSANAG00000028114	SMG7	100	93.687	ENSPCIG00000003786	SMG7	100	93.519	Phascolarctos_cinereus
ENSANAG00000028114	SMG7	85	90.446	ENSPFOG00000019219	smg7	99	64.498	Poecilia_formosa
ENSANAG00000028114	SMG7	85	90.446	ENSPLAG00000001446	smg7	99	64.488	Poecilia_latipinna
ENSANAG00000028114	SMG7	85	90.446	ENSPMEG00000005218	smg7	99	63.766	Poecilia_mexicana
ENSANAG00000028114	SMG7	85	89.809	ENSPREG00000019039	smg7	92	61.351	Poecilia_reticulata
ENSANAG00000028114	SMG7	100	98.857	ENSPPYG00000000427	SMG7	100	98.857	Pongo_abelii
ENSANAG00000028114	SMG7	98	83.304	ENSPCAG00000008360	SMG7	99	83.713	Procavia_capensis
ENSANAG00000028114	SMG7	98	98.889	ENSPCOG00000011996	SMG7	100	96.774	Propithecus_coquereli
ENSANAG00000028114	SMG7	99	85.362	ENSPVAG00000000851	SMG7	99	85.603	Pteropus_vampyrus
ENSANAG00000028114	SMG7	85	94.231	ENSPNYG00000007643	smg7	99	65.896	Pundamilia_nyererei
ENSANAG00000028114	SMG7	88	92.593	ENSPNAG00000011374	smg7	98	70.202	Pygocentrus_nattereri
ENSANAG00000028114	SMG7	100	94.552	ENSRNOG00000027962	Smg7	100	96.561	Rattus_norvegicus
ENSANAG00000028114	SMG7	100	98.681	ENSRBIG00000036316	SMG7	100	98.690	Rhinopithecus_bieti
ENSANAG00000028114	SMG7	100	98.681	ENSRROG00000035719	SMG7	100	98.690	Rhinopithecus_roxellana
ENSANAG00000028114	SMG7	100	95.278	ENSSBOG00000023454	SMG7	100	99.126	Saimiri_boliviensis_boliviensis
ENSANAG00000028114	SMG7	100	92.888	ENSSHAG00000013147	SMG7	100	92.625	Sarcophilus_harrisii
ENSANAG00000028114	SMG7	84	92.903	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSANAG00000028114	SMG7	85	92.994	ENSSMAG00000006067	smg7	99	66.116	Scophthalmus_maximus
ENSANAG00000028114	SMG7	90	89.697	ENSSDUG00000017543	smg7	99	65.593	Seriola_dumerili
ENSANAG00000028114	SMG7	86	93.038	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSANAG00000028114	SMG7	99	90.548	ENSSPUG00000002064	SMG7	99	90.371	Sphenodon_punctatus
ENSANAG00000028114	SMG7	78	93.007	ENSSPAG00000008733	smg7	100	65.630	Stegastes_partitus
ENSANAG00000028114	SMG7	100	93.429	ENSSSCG00000015558	SMG7	97	97.101	Sus_scrofa
ENSANAG00000028114	SMG7	99	89.506	ENSTGUG00000003928	SMG7	100	89.418	Taeniopygia_guttata
ENSANAG00000028114	SMG7	95	82.857	ENSTRUG00000003612	-	95	82.857	Takifugu_rubripes
ENSANAG00000028114	SMG7	84	89.103	ENSTNIG00000002802	smg7	99	61.607	Tetraodon_nigroviridis
ENSANAG00000028114	SMG7	81	93.777	ENSTBEG00000003220	SMG7	80	94.206	Tupaia_belangeri
ENSANAG00000028114	SMG7	99	95.047	ENSTTRG00000014778	SMG7	99	95.671	Tursiops_truncatus
ENSANAG00000028114	SMG7	96	93.151	ENSUAMG00000017473	SMG7	100	93.151	Ursus_americanus
ENSANAG00000028114	SMG7	96	93.275	ENSUMAG00000016389	SMG7	97	97.081	Ursus_maritimus
ENSANAG00000028114	SMG7	100	93.513	ENSVVUG00000008976	SMG7	100	94.924	Vulpes_vulpes
ENSANAG00000028114	SMG7	84	92.258	ENSXETG00000012528	smg7	100	71.119	Xenopus_tropicalis
ENSANAG00000028114	SMG7	85	91.083	ENSXMAG00000007123	smg7	99	64.452	Xiphophorus_maculatus