EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000028333 (Gene tree)
Gene ID: 105727879
Gene Symbol: PRPF38B
Alias: FLJ10330|NET1
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 11708 bases
Position: chrKZ200342.1:3619287-3630994
Accession: 105727879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000021074	PRP38	PF03371.15	2.3e-57	1	1
ENSANAP00000021078	PRP38	PF03371.15	1.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000038946	PRPF38B-201	540	-	ENSANAP00000021062	179 (aa)	-	A0A2K5DJH0
ENSANAT00000038962	PRPF38B-203	573	-	ENSANAP00000021078	190 (aa)	-	A0A2K5DJH6
ENSANAT00000038958	PRPF38B-202	1641	XM_012468020	ENSANAP00000021074	546 (aa)	XP_012323443	A0A2K5DJE1

Gene Model

Click here to download ENSANAG00000028333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000028333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000028333	PRPF38B	100	100.000	ENSG00000134186	PRPF38B	100	100.000	Homo_sapiens
ENSANAG00000028333	PRPF38B	100	94.301	ENSCGRG00001018841	Prpf38b	100	90.893	Cricetulus_griseus_chok1gshd
ENSANAG00000028333	PRPF38B	83	92.511	ENSCGRG00000002972	Prpf38b	100	90.308	Cricetulus_griseus_crigri
ENSANAG00000028333	PRPF38B	80	94.023	ENSDORG00000025236	-	97	93.824	Dipodomys_ordii
ENSANAG00000028333	PRPF38B	76	90.972	ENSEBUG00000001683	-	58	73.034	Eptatretus_burgeri
ENSANAG00000028333	PRPF38B	100	95.288	ENSEEUG00000014328	PRPF38B	100	91.408	Erinaceus_europaeus
ENSANAG00000028333	PRPF38B	100	96.154	ENSFDAG00000021009	PRPF38B	100	96.154	Fukomys_damarensis
ENSANAG00000028333	PRPF38B	100	100.000	ENSGGOG00000011288	PRPF38B	100	100.000	Gorilla_gorilla
ENSANAG00000028333	PRPF38B	91	86.747	ENSMGAG00000006188	PRPF38B	100	87.550	Meleagris_gallopavo
ENSANAG00000028333	PRPF38B	100	96.335	ENSMAUG00000019131	Prpf38b	100	90.676	Mesocricetus_auratus
ENSANAG00000028333	PRPF38B	100	96.842	MGP_CAROLIEiJ_G0025542	Prpf38b	99	97.826	Mus_caroli
ENSANAG00000028333	PRPF38B	100	96.335	ENSMUSG00000027881	Prpf38b	99	96.774	Mus_musculus
ENSANAG00000028333	PRPF38B	100	96.335	MGP_PahariEiJ_G0026988	Prpf38b	99	96.774	Mus_pahari
ENSANAG00000028333	PRPF38B	100	96.335	MGP_SPRETEiJ_G0026492	Prpf38b	99	96.774	Mus_spretus
ENSANAG00000028333	PRPF38B	100	98.953	ENSNLEG00000001645	-	100	98.953	Nomascus_leucogenys
ENSANAG00000028333	PRPF38B	100	91.575	ENSNLEG00000030268	-	100	90.476	Nomascus_leucogenys
ENSANAG00000028333	PRPF38B	100	99.474	ENSPPAG00000001260	PRPF38B	100	99.474	Pan_paniscus
ENSANAG00000028333	PRPF38B	100	98.438	ENSPPRG00000002116	PRPF38B	100	98.438	Panthera_pardus
ENSANAG00000028333	PRPF38B	100	100.000	ENSPTRG00000001032	PRPF38B	100	100.000	Pan_troglodytes
ENSANAG00000028333	PRPF38B	100	98.953	ENSPANG00000007560	PRPF38B	100	98.953	Papio_anubis
ENSANAG00000028333	PRPF38B	100	94.845	ENSPCIG00000024841	PRPF38B	100	89.455	Phascolarctos_cinereus
ENSANAG00000028333	PRPF38B	100	96.875	ENSPVAG00000011929	-	100	96.715	Pteropus_vampyrus
ENSANAG00000028333	PRPF38B	100	95.644	ENSSARG00000012818	-	100	95.644	Sorex_araneus
ENSANAG00000028333	PRPF38B	98	87.302	ENSTGUG00000004594	-	70	88.991	Taeniopygia_guttata
ENSANAG00000028333	PRPF38B	100	97.268	ENSUAMG00000023817	PRPF38B	100	97.268	Ursus_americanus