EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000028451 (Gene tree)
Gene ID: 105710912
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 107885 bases
Position: chrKZ199269.1:7885058-7992942
Accession: 105710912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000021337	Upf2	PF04050.14	7.3e-33	1	1
ENSANAP00000021337	MIF4G	PF02854.19	6.5e-77	1	3
ENSANAP00000021337	MIF4G	PF02854.19	6.5e-77	2	3
ENSANAP00000021337	MIF4G	PF02854.19	6.5e-77	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000039223	UPF2-201	3573	XM_021670590	ENSANAP00000021337	1190 (aa)	XP_021526265	A0A2K5DKA5

Gene Model

Click here to download ENSANAG00000028451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000028451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000028451	UPF2	99	87.186	ENSG00000151461	UPF2	99	88.522	Homo_sapiens
ENSANAG00000028451	UPF2	93	74.572	ENSAPOG00000015837	UPF2	91	74.313	Acanthochromis_polyacanthus
ENSANAG00000028451	UPF2	99	86.557	ENSAMEG00000004586	UPF2	99	87.814	Ailuropoda_melanoleuca
ENSANAG00000028451	UPF2	93	79.078	ENSACIG00000018078	UPF2	91	79.006	Amphilophus_citrinellus
ENSANAG00000028451	UPF2	93	79.078	ENSAOCG00000016766	UPF2	91	79.092	Amphiprion_ocellaris
ENSANAG00000028451	UPF2	93	79.163	ENSAPEG00000019084	UPF2	91	79.177	Amphiprion_percula
ENSANAG00000028451	UPF2	93	78.894	ENSATEG00000021677	UPF2	97	76.640	Anabas_testudineus
ENSANAG00000028451	UPF2	99	79.483	ENSAPLG00000010287	UPF2	99	78.774	Anas_platyrhynchos
ENSANAG00000028451	UPF2	99	82.598	ENSACAG00000009259	UPF2	99	82.585	Anolis_carolinensis
ENSANAG00000028451	UPF2	93	79.249	ENSACLG00000012696	UPF2	91	79.177	Astatotilapia_calliptera
ENSANAG00000028451	UPF2	93	79.231	ENSAMXG00000013700	UPF2	90	79.709	Astyanax_mexicanus
ENSANAG00000028451	UPF2	99	86.478	ENSBTAG00000000288	UPF2	99	87.657	Bos_taurus
ENSANAG00000028451	UPF2	74	32.000	WBGene00004881	smg-3	53	32.000	Caenorhabditis_elegans
ENSANAG00000028451	UPF2	99	90.165	ENSCJAG00000020685	UPF2	99	90.165	Callithrix_jacchus
ENSANAG00000028451	UPF2	99	86.399	ENSCAFG00000004839	UPF2	99	87.657	Canis_familiaris
ENSANAG00000028451	UPF2	96	99.490	ENSCAFG00020005882	UPF2	100	99.482	Canis_lupus_dingo
ENSANAG00000028451	UPF2	100	86.353	ENSCHIG00000020359	UPF2	100	87.529	Capra_hircus
ENSANAG00000028451	UPF2	93	100.000	ENSTSYG00000000935	UPF2	97	100.000	Carlito_syrichta
ENSANAG00000028451	UPF2	93	81.485	ENSCAPG00000016658	UPF2	95	81.469	Cavia_aperea
ENSANAG00000028451	UPF2	99	85.554	ENSCPOG00000008809	UPF2	98	87.560	Cavia_porcellus
ENSANAG00000028451	UPF2	99	80.409	ENSCCAG00000035991	UPF2	99	84.107	Cebus_capucinus
ENSANAG00000028451	UPF2	99	87.343	ENSCATG00000032679	UPF2	99	88.679	Cercocebus_atys
ENSANAG00000028451	UPF2	99	85.917	ENSCLAG00000011434	UPF2	99	87.884	Chinchilla_lanigera
ENSANAG00000028451	UPF2	99	87.421	ENSCSAG00000013372	UPF2	99	88.758	Chlorocebus_sabaeus
ENSANAG00000028451	UPF2	91	96.525	ENSCHOG00000000422	UPF2	89	96.525	Choloepus_hoffmanni
ENSANAG00000028451	UPF2	99	83.886	ENSCPBG00000027823	UPF2	100	83.807	Chrysemys_picta_bellii
ENSANAG00000028451	UPF2	79	46.779	ENSCSAVG00000007772	-	79	47.429	Ciona_savignyi
ENSANAG00000028451	UPF2	99	81.279	ENSCANG00000040396	UPF2	100	83.189	Colobus_angolensis_palliatus
ENSANAG00000028451	UPF2	99	85.759	ENSCGRG00001019347	Upf2	99	87.333	Cricetulus_griseus_chok1gshd
ENSANAG00000028451	UPF2	99	85.759	ENSCGRG00000017993	Upf2	99	87.333	Cricetulus_griseus_crigri
ENSANAG00000028451	UPF2	92	76.070	ENSCSEG00000003520	UPF2	91	75.457	Cynoglossus_semilaevis
ENSANAG00000028451	UPF2	94	78.772	ENSCVAG00000006167	UPF2	89	85.049	Cyprinodon_variegatus
ENSANAG00000028451	UPF2	99	86.478	ENSDNOG00000018160	UPF2	99	87.657	Dasypus_novemcinctus
ENSANAG00000028451	UPF2	99	85.377	ENSDORG00000002478	Upf2	99	86.792	Dipodomys_ordii
ENSANAG00000028451	UPF2	83	40.615	FBgn0029992	Upf2	73	43.860	Drosophila_melanogaster
ENSANAG00000028451	UPF2	73	100.000	ENSETEG00000011583	-	62	100.000	Echinops_telfairi
ENSANAG00000028451	UPF2	89	61.854	ENSEBUG00000012448	-	71	61.854	Eptatretus_burgeri
ENSANAG00000028451	UPF2	92	98.447	ENSEASG00005019274	UPF2	99	98.447	Equus_asinus_asinus
ENSANAG00000028451	UPF2	99	86.467	ENSECAG00000017022	UPF2	99	88.434	Equus_caballus
ENSANAG00000028451	UPF2	74	94.855	ENSEEUG00000007819	UPF2	73	94.855	Erinaceus_europaeus
ENSANAG00000028451	UPF2	99	76.206	ENSELUG00000012014	UPF2	97	76.485	Esox_lucius
ENSANAG00000028451	UPF2	99	99.441	ENSFCAG00000005785	UPF2	92	100.000	Felis_catus
ENSANAG00000028451	UPF2	99	83.006	ENSFALG00000001889	UPF2	98	83.006	Ficedula_albicollis
ENSANAG00000028451	UPF2	99	85.366	ENSFDAG00000014348	UPF2	99	87.648	Fukomys_damarensis
ENSANAG00000028451	UPF2	94	79.131	ENSFHEG00000009826	UPF2	92	78.866	Fundulus_heteroclitus
ENSANAG00000028451	UPF2	92	77.701	ENSGMOG00000005557	UPF2	91	77.711	Gadus_morhua
ENSANAG00000028451	UPF2	99	83.346	ENSGALG00000033772	UPF2	99	83.333	Gallus_gallus
ENSANAG00000028451	UPF2	93	78.645	ENSGAFG00000020867	UPF2	91	78.351	Gambusia_affinis
ENSANAG00000028451	UPF2	92	78.343	ENSGACG00000001080	UPF2	91	78.358	Gasterosteus_aculeatus
ENSANAG00000028451	UPF2	99	82.533	ENSGAGG00000002700	UPF2	99	82.691	Gopherus_agassizii
ENSANAG00000028451	UPF2	99	87.264	ENSGGOG00000001479	UPF2	99	88.601	Gorilla_gorilla
ENSANAG00000028451	UPF2	93	79.249	ENSHBUG00000004249	UPF2	91	79.177	Haplochromis_burtoni
ENSANAG00000028451	UPF2	99	76.935	ENSHGLG00000003822	-	99	78.436	Heterocephalus_glaber_female
ENSANAG00000028451	UPF2	99	85.995	ENSHGLG00000015176	-	99	87.962	Heterocephalus_glaber_female
ENSANAG00000028451	UPF2	89	90.673	ENSHGLG00100010036	UPF2	100	82.151	Heterocephalus_glaber_male
ENSANAG00000028451	UPF2	93	77.797	ENSHCOG00000004025	UPF2	97	75.920	Hippocampus_comes
ENSANAG00000028451	UPF2	93	78.443	ENSIPUG00000015524	UPF2	91	78.767	Ictalurus_punctatus
ENSANAG00000028451	UPF2	99	85.692	ENSSTOG00000013075	UPF2	99	87.186	Ictidomys_tridecemlineatus
ENSANAG00000028451	UPF2	99	84.670	ENSJJAG00000004913	Upf2	99	85.208	Jaculus_jaculus
ENSANAG00000028451	UPF2	93	79.181	ENSKMAG00000001071	UPF2	92	79.127	Kryptolebias_marmoratus
ENSANAG00000028451	UPF2	93	79.555	ENSLBEG00000016394	-	90	79.555	Labrus_bergylta
ENSANAG00000028451	UPF2	71	77.938	ENSLBEG00000000728	-	83	77.987	Labrus_bergylta
ENSANAG00000028451	UPF2	92	74.850	ENSLACG00000015945	UPF2	92	74.680	Latimeria_chalumnae
ENSANAG00000028451	UPF2	92	82.744	ENSLOCG00000015698	UPF2	92	82.519	Lepisosteus_oculatus
ENSANAG00000028451	UPF2	99	87.343	ENSMFAG00000043865	UPF2	99	88.679	Macaca_fascicularis
ENSANAG00000028451	UPF2	99	87.343	ENSMMUG00000008241	UPF2	99	88.679	Macaca_mulatta
ENSANAG00000028451	UPF2	79	84.226	ENSMNEG00000008062	UPF2	99	86.119	Macaca_nemestrina
ENSANAG00000028451	UPF2	94	99.031	ENSMLEG00000036120	UPF2	99	99.272	Mandrillus_leucophaeus
ENSANAG00000028451	UPF2	93	79.064	ENSMAMG00000018276	UPF2	91	79.127	Mastacembelus_armatus
ENSANAG00000028451	UPF2	93	79.249	ENSMZEG00005021595	UPF2	91	79.177	Maylandia_zebra
ENSANAG00000028451	UPF2	99	83.649	ENSMGAG00000004573	UPF2	99	83.636	Meleagris_gallopavo
ENSANAG00000028451	UPF2	99	87.249	ENSMAUG00000016512	Upf2	99	88.853	Mesocricetus_auratus
ENSANAG00000028451	UPF2	94	99.490	ENSMICG00000001716	UPF2	99	99.482	Microcebus_murinus
ENSANAG00000028451	UPF2	99	85.276	ENSMOCG00000008263	Upf2	99	87.244	Microtus_ochrogaster
ENSANAG00000028451	UPF2	91	77.360	ENSMMOG00000006528	UPF2	97	74.313	Mola_mola
ENSANAG00000028451	UPF2	99	85.063	ENSMODG00000016794	UPF2	99	86.242	Monodelphis_domestica
ENSANAG00000028451	UPF2	93	78.632	ENSMALG00000002663	UPF2	91	78.522	Monopterus_albus
ENSANAG00000028451	UPF2	99	85.287	MGP_CAROLIEiJ_G0023157	Upf2	99	97.897	Mus_caroli
ENSANAG00000028451	UPF2	99	85.366	ENSMUSG00000043241	Upf2	99	97.323	Mus_musculus
ENSANAG00000028451	UPF2	99	85.051	MGP_PahariEiJ_G0019217	Upf2	99	96.941	Mus_pahari
ENSANAG00000028451	UPF2	99	85.602	MGP_SPRETEiJ_G0024075	Upf2	99	97.323	Mus_spretus
ENSANAG00000028451	UPF2	99	86.478	ENSMPUG00000001064	UPF2	99	87.736	Mustela_putorius_furo
ENSANAG00000028451	UPF2	99	85.345	ENSMLUG00000000228	UPF2	100	86.520	Myotis_lucifugus
ENSANAG00000028451	UPF2	93	79.249	ENSNBRG00000013629	UPF2	91	79.177	Neolamprologus_brichardi
ENSANAG00000028451	UPF2	99	87.107	ENSNLEG00000012058	UPF2	99	88.443	Nomascus_leucogenys
ENSANAG00000028451	UPF2	72	100.000	ENSOPRG00000006801	-	73	100.000	Ochotona_princeps
ENSANAG00000028451	UPF2	99	85.602	ENSODEG00000001290	UPF2	99	87.569	Octodon_degus
ENSANAG00000028451	UPF2	93	79.334	ENSONIG00000017991	UPF2	91	79.263	Oreochromis_niloticus
ENSANAG00000028451	UPF2	99	87.588	ENSOCUG00000006230	UPF2	100	86.546	Oryctolagus_cuniculus
ENSANAG00000028451	UPF2	93	77.957	ENSORLG00000017189	UPF2	91	78.767	Oryzias_latipes
ENSANAG00000028451	UPF2	93	78.043	ENSORLG00020005969	UPF2	91	78.853	Oryzias_latipes_hni
ENSANAG00000028451	UPF2	93	77.957	ENSORLG00015005713	UPF2	91	78.767	Oryzias_latipes_hsok
ENSANAG00000028451	UPF2	93	74.532	ENSOMEG00000023420	UPF2	89	75.321	Oryzias_melastigma
ENSANAG00000028451	UPF2	99	86.871	ENSOGAG00000005796	UPF2	99	88.050	Otolemur_garnettii
ENSANAG00000028451	UPF2	99	86.342	ENSOARG00000014587	UPF2	99	87.520	Ovis_aries
ENSANAG00000028451	UPF2	99	83.450	ENSPPAG00000037953	UPF2	100	85.456	Pan_paniscus
ENSANAG00000028451	UPF2	99	86.321	ENSPPRG00000000690	UPF2	99	87.500	Panthera_pardus
ENSANAG00000028451	UPF2	99	86.321	ENSPTIG00000008867	UPF2	99	87.500	Panthera_tigris_altaica
ENSANAG00000028451	UPF2	99	87.264	ENSPTRG00000002291	UPF2	99	88.601	Pan_troglodytes
ENSANAG00000028451	UPF2	99	87.264	ENSPANG00000023399	UPF2	99	88.601	Papio_anubis
ENSANAG00000028451	UPF2	92	79.343	ENSPKIG00000025502	UPF2	91	79.399	Paramormyrops_kingsleyae
ENSANAG00000028451	UPF2	56	74.471	ENSPSIG00000015158	UPF2	95	74.437	Pelodiscus_sinensis
ENSANAG00000028451	UPF2	93	77.148	ENSPMGG00000005259	UPF2	92	78.095	Periophthalmus_magnuspinnatus
ENSANAG00000028451	UPF2	89	77.763	ENSPEMG00000015731	Upf2	94	81.105	Peromyscus_maniculatus_bairdii
ENSANAG00000028451	UPF2	99	84.579	ENSPCIG00000006656	UPF2	100	85.770	Phascolarctos_cinereus
ENSANAG00000028451	UPF2	93	79.074	ENSPFOG00000017118	UPF2	91	78.694	Poecilia_formosa
ENSANAG00000028451	UPF2	93	79.074	ENSPLAG00000005094	UPF2	91	78.694	Poecilia_latipinna
ENSANAG00000028451	UPF2	93	79.074	ENSPMEG00000017009	UPF2	91	78.694	Poecilia_mexicana
ENSANAG00000028451	UPF2	93	78.966	ENSPREG00000021880	UPF2	91	78.929	Poecilia_reticulata
ENSANAG00000028451	UPF2	63	95.839	ENSPPYG00000002089	-	92	95.839	Pongo_abelii
ENSANAG00000028451	UPF2	99	74.214	ENSPCAG00000000684	UPF2	99	74.214	Procavia_capensis
ENSANAG00000028451	UPF2	99	83.884	ENSPCOG00000021656	UPF2	100	84.827	Propithecus_coquereli
ENSANAG00000028451	UPF2	99	80.440	ENSPVAG00000017286	UPF2	99	80.440	Pteropus_vampyrus
ENSANAG00000028451	UPF2	93	78.348	ENSPNYG00000017096	UPF2	91	78.272	Pundamilia_nyererei
ENSANAG00000028451	UPF2	93	79.299	ENSPNAG00000009357	UPF2	91	79.897	Pygocentrus_nattereri
ENSANAG00000028451	UPF2	99	79.702	ENSRNOG00000023593	Upf2	98	100.000	Rattus_norvegicus
ENSANAG00000028451	UPF2	99	85.928	ENSRBIG00000037780	UPF2	100	87.579	Rhinopithecus_bieti
ENSANAG00000028451	UPF2	99	86.950	ENSRROG00000043547	UPF2	99	88.601	Rhinopithecus_roxellana
ENSANAG00000028451	UPF2	99	86.782	ENSSBOG00000020012	UPF2	99	89.300	Saimiri_boliviensis_boliviensis
ENSANAG00000028451	UPF2	92	80.431	ENSSFOG00015023788	upf2	98	76.645	Scleropages_formosus
ENSANAG00000028451	UPF2	91	77.170	ENSSMAG00000007637	UPF2	91	77.048	Scophthalmus_maximus
ENSANAG00000028451	UPF2	93	78.943	ENSSDUG00000017244	UPF2	97	76.683	Seriola_dumerili
ENSANAG00000028451	UPF2	93	77.094	ENSSLDG00000016866	UPF2	97	75.020	Seriola_lalandi_dorsalis
ENSANAG00000028451	UPF2	99	87.186	ENSSARG00000008615	UPF2	99	87.186	Sorex_araneus
ENSANAG00000028451	UPF2	99	79.858	ENSSPUG00000014544	UPF2	99	80.016	Sphenodon_punctatus
ENSANAG00000028451	UPF2	68	89.183	ENSSSCG00000011117	-	99	89.183	Sus_scrofa
ENSANAG00000028451	UPF2	99	82.992	ENSTGUG00000002163	-	100	82.992	Taeniopygia_guttata
ENSANAG00000028451	UPF2	93	78.693	ENSTRUG00000007519	UPF2	97	76.160	Takifugu_rubripes
ENSANAG00000028451	UPF2	99	75.139	ENSTNIG00000004453	UPF2	97	74.679	Tetraodon_nigroviridis
ENSANAG00000028451	UPF2	92	79.205	ENSTBEG00000012679	UPF2	93	79.797	Tupaia_belangeri
ENSANAG00000028451	UPF2	99	86.389	ENSTTRG00000016388	UPF2	99	88.120	Tursiops_truncatus
ENSANAG00000028451	UPF2	91	100.000	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSANAG00000028451	UPF2	99	86.557	ENSUMAG00000012953	UPF2	95	87.814	Ursus_maritimus
ENSANAG00000028451	UPF2	85	96.774	ENSVPAG00000006763	UPF2	86	96.774	Vicugna_pacos
ENSANAG00000028451	UPF2	99	86.321	ENSVVUG00000006166	UPF2	99	87.579	Vulpes_vulpes
ENSANAG00000028451	UPF2	99	77.639	ENSXETG00000033103	UPF2	91	83.073	Xenopus_tropicalis
ENSANAG00000028451	UPF2	93	78.902	ENSXCOG00000011604	UPF2	91	78.608	Xiphophorus_couchianus
ENSANAG00000028451	UPF2	93	78.902	ENSXMAG00000017209	UPF2	91	78.522	Xiphophorus_maculatus