EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000029120 (Gene tree)
Gene ID: 105724395
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 17710 bases
Position: chrKZ200996.1:3018584-3036293
Accession: 105724395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000023297	DUF382	PF04037.13	1.7e-59	1	1
ENSANAP00000023273	DUF382	PF04037.13	1.7e-59	1	1
ENSANAP00000023295	DUF382	PF04037.13	1.8e-59	1	1
ENSANAP00000023240	DUF382	PF04037.13	2.2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000041147	SF3B2-201	3785	-	ENSANAP00000023240	1049 (aa)	-	A0A2K5DQJ6
ENSANAT00000041180	SF3B2-202	3451	XM_012462931	ENSANAP00000023273	896 (aa)	XP_012318354	A0A2K5DQP0
ENSANAT00000041202	SF3B2-203	2721	-	ENSANAP00000023295	906 (aa)	-	A0A2K5DQQ2
ENSANAT00000041204	SF3B2-204	2640	-	ENSANAP00000023297	879 (aa)	-	A0A2K5DR01

Gene Model

Click here to download ENSANAG00000029120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000029120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000029120	SF3B2	100	99.107	ENSG00000087365	SF3B2	100	99.107	Homo_sapiens
ENSANAG00000029120	SF3B2	95	70.116	ENSAPOG00000001974	sf3b2	83	74.601	Acanthochromis_polyacanthus
ENSANAG00000029120	SF3B2	100	97.891	ENSAMEG00000017206	SF3B2	100	97.891	Ailuropoda_melanoleuca
ENSANAG00000029120	SF3B2	97	67.657	ENSACIG00000000624	sf3b2	87	74.308	Amphilophus_citrinellus
ENSANAG00000029120	SF3B2	97	70.668	ENSAOCG00000009207	sf3b2	86	75.195	Amphiprion_ocellaris
ENSANAG00000029120	SF3B2	97	70.258	ENSAPEG00000002762	sf3b2	87	73.333	Amphiprion_percula
ENSANAG00000029120	SF3B2	100	65.461	ENSACAG00000008615	SF3B2	98	66.439	Anolis_carolinensis
ENSANAG00000029120	SF3B2	86	73.032	ENSACLG00000014771	sf3b2	87	74.708	Astatotilapia_calliptera
ENSANAG00000029120	SF3B2	84	71.149	ENSAMXG00000007929	sf3b2	86	77.237	Astyanax_mexicanus
ENSANAG00000029120	SF3B2	100	97.000	ENSBTAG00000002778	SF3B2	100	97.000	Bos_taurus
ENSANAG00000029120	SF3B2	60	50.532	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSANAG00000029120	SF3B2	100	99.777	ENSCJAG00000001656	SF3B2	100	99.777	Callithrix_jacchus
ENSANAG00000029120	SF3B2	100	97.998	ENSCAFG00000013033	SF3B2	100	97.998	Canis_familiaris
ENSANAG00000029120	SF3B2	100	97.998	ENSCAFG00020015382	SF3B2	100	97.998	Canis_lupus_dingo
ENSANAG00000029120	SF3B2	100	97.108	ENSCHIG00000011211	SF3B2	100	97.108	Capra_hircus
ENSANAG00000029120	SF3B2	100	98.661	ENSTSYG00000000959	SF3B2	100	98.661	Carlito_syrichta
ENSANAG00000029120	SF3B2	61	97.895	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSANAG00000029120	SF3B2	91	97.240	ENSCPOG00000008294	SF3B2	100	97.240	Cavia_porcellus
ENSANAG00000029120	SF3B2	100	99.777	ENSCCAG00000035256	SF3B2	100	99.777	Cebus_capucinus
ENSANAG00000029120	SF3B2	100	99.219	ENSCATG00000042240	SF3B2	100	99.219	Cercocebus_atys
ENSANAG00000029120	SF3B2	100	98.180	ENSCLAG00000016852	SF3B2	100	98.180	Chinchilla_lanigera
ENSANAG00000029120	SF3B2	100	99.219	ENSCSAG00000008121	SF3B2	100	99.219	Chlorocebus_sabaeus
ENSANAG00000029120	SF3B2	89	99.485	ENSCHOG00000001476	SF3B2	90	91.237	Choloepus_hoffmanni
ENSANAG00000029120	SF3B2	85	81.771	ENSCPBG00000022465	SF3B2	87	88.401	Chrysemys_picta_bellii
ENSANAG00000029120	SF3B2	73	60.429	ENSCING00000005665	-	99	60.063	Ciona_intestinalis
ENSANAG00000029120	SF3B2	71	60.563	ENSCSAVG00000002029	-	99	59.779	Ciona_savignyi
ENSANAG00000029120	SF3B2	100	99.219	ENSCANG00000039680	SF3B2	100	99.219	Colobus_angolensis_palliatus
ENSANAG00000029120	SF3B2	100	98.066	ENSCGRG00001015741	Sf3b2	100	98.066	Cricetulus_griseus_chok1gshd
ENSANAG00000029120	SF3B2	100	98.066	ENSCGRG00000018110	Sf3b2	100	98.066	Cricetulus_griseus_crigri
ENSANAG00000029120	SF3B2	75	75.150	ENSCSEG00000000230	sf3b2	78	77.129	Cynoglossus_semilaevis
ENSANAG00000029120	SF3B2	97	68.873	ENSCVAG00000003357	sf3b2	85	74.801	Cyprinodon_variegatus
ENSANAG00000029120	SF3B2	85	73.619	ENSDARG00000018049	sf3b2	92	74.247	Danio_rerio
ENSANAG00000029120	SF3B2	100	95.996	ENSDNOG00000009484	SF3B2	100	96.871	Dasypus_novemcinctus
ENSANAG00000029120	SF3B2	100	97.500	ENSDORG00000002495	Sf3b2	100	97.500	Dipodomys_ordii
ENSANAG00000029120	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	86	88.889	Echinops_telfairi
ENSANAG00000029120	SF3B2	98	58.900	ENSEBUG00000013703	sf3b2	99	60.065	Eptatretus_burgeri
ENSANAG00000029120	SF3B2	100	97.889	ENSEASG00005004508	SF3B2	100	97.889	Equus_asinus_asinus
ENSANAG00000029120	SF3B2	100	97.889	ENSECAG00000024461	SF3B2	100	97.889	Equus_caballus
ENSANAG00000029120	SF3B2	62	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSANAG00000029120	SF3B2	97	67.068	ENSELUG00000005586	sf3b2	86	71.945	Esox_lucius
ENSANAG00000029120	SF3B2	100	98.109	ENSFCAG00000013289	SF3B2	100	98.109	Felis_catus
ENSANAG00000029120	SF3B2	80	69.590	ENSFALG00000014653	SF3B2	98	69.014	Ficedula_albicollis
ENSANAG00000029120	SF3B2	100	97.669	ENSFDAG00000019806	SF3B2	100	97.669	Fukomys_damarensis
ENSANAG00000029120	SF3B2	84	71.805	ENSFHEG00000020968	sf3b2	86	73.254	Fundulus_heteroclitus
ENSANAG00000029120	SF3B2	73	78.049	ENSGMOG00000012131	sf3b2	96	80.975	Gadus_morhua
ENSANAG00000029120	SF3B2	97	68.565	ENSGAFG00000001675	sf3b2	86	73.123	Gambusia_affinis
ENSANAG00000029120	SF3B2	73	79.231	ENSGACG00000019012	sf3b2	96	80.317	Gasterosteus_aculeatus
ENSANAG00000029120	SF3B2	100	78.731	ENSGAGG00000023916	SF3B2	86	86.212	Gopherus_agassizii
ENSANAG00000029120	SF3B2	100	99.107	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSANAG00000029120	SF3B2	86	73.161	ENSHBUG00000017349	sf3b2	87	74.708	Haplochromis_burtoni
ENSANAG00000029120	SF3B2	100	98.066	ENSHGLG00000010807	SF3B2	100	98.066	Heterocephalus_glaber_female
ENSANAG00000029120	SF3B2	100	98.103	ENSHGLG00100006361	SF3B2	100	98.103	Heterocephalus_glaber_male
ENSANAG00000029120	SF3B2	97	65.795	ENSHCOG00000016203	sf3b2	87	70.926	Hippocampus_comes
ENSANAG00000029120	SF3B2	97	66.213	ENSIPUG00000009383	sf3b2	85	71.879	Ictalurus_punctatus
ENSANAG00000029120	SF3B2	100	98.549	ENSSTOG00000028892	SF3B2	100	98.549	Ictidomys_tridecemlineatus
ENSANAG00000029120	SF3B2	100	98.073	ENSJJAG00000018193	Sf3b2	100	98.073	Jaculus_jaculus
ENSANAG00000029120	SF3B2	60	87.970	ENSKMAG00000020181	sf3b2	84	74.211	Kryptolebias_marmoratus
ENSANAG00000029120	SF3B2	97	69.326	ENSLBEG00000027739	sf3b2	88	79.463	Labrus_bergylta
ENSANAG00000029120	SF3B2	82	81.250	ENSLACG00000010429	SF3B2	93	74.936	Latimeria_chalumnae
ENSANAG00000029120	SF3B2	100	97.506	ENSLAFG00000002128	SF3B2	100	97.506	Loxodonta_africana
ENSANAG00000029120	SF3B2	100	99.108	ENSMFAG00000003064	SF3B2	100	99.108	Macaca_fascicularis
ENSANAG00000029120	SF3B2	100	94.866	ENSMMUG00000011743	SF3B2	100	94.866	Macaca_mulatta
ENSANAG00000029120	SF3B2	100	99.107	ENSMNEG00000034437	SF3B2	100	99.107	Macaca_nemestrina
ENSANAG00000029120	SF3B2	100	98.996	ENSMLEG00000029373	SF3B2	100	98.996	Mandrillus_leucophaeus
ENSANAG00000029120	SF3B2	84	74.742	ENSMAMG00000014103	sf3b2	86	74.872	Mastacembelus_armatus
ENSANAG00000029120	SF3B2	86	73.032	ENSMZEG00005020789	sf3b2	86	74.708	Maylandia_zebra
ENSANAG00000029120	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSANAG00000029120	SF3B2	100	98.326	ENSMICG00000008565	-	100	98.326	Microcebus_murinus
ENSANAG00000029120	SF3B2	100	94.543	ENSMICG00000016942	-	97	94.543	Microcebus_murinus
ENSANAG00000029120	SF3B2	100	97.952	ENSMOCG00000003136	Sf3b2	100	97.952	Microtus_ochrogaster
ENSANAG00000029120	SF3B2	97	66.930	ENSMMOG00000012928	sf3b2	86	72.026	Mola_mola
ENSANAG00000029120	SF3B2	72	88.346	ENSMODG00000025020	-	99	87.402	Monodelphis_domestica
ENSANAG00000029120	SF3B2	85	91.258	ENSMODG00000008490	-	92	93.103	Monodelphis_domestica
ENSANAG00000029120	SF3B2	86	70.665	ENSMALG00000015137	sf3b2	84	73.297	Monopterus_albus
ENSANAG00000029120	SF3B2	100	96.928	MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.928	Mus_caroli
ENSANAG00000029120	SF3B2	100	97.838	ENSMUSG00000024853	Sf3b2	100	97.838	Mus_musculus
ENSANAG00000029120	SF3B2	100	97.838	MGP_PahariEiJ_G0014036	Sf3b2	100	97.838	Mus_pahari
ENSANAG00000029120	SF3B2	100	97.725	MGP_SPRETEiJ_G0023453	Sf3b2	100	97.725	Mus_spretus
ENSANAG00000029120	SF3B2	100	97.887	ENSMPUG00000011349	SF3B2	100	97.887	Mustela_putorius_furo
ENSANAG00000029120	SF3B2	100	96.778	ENSMLUG00000011136	SF3B2	100	96.778	Myotis_lucifugus
ENSANAG00000029120	SF3B2	100	98.066	ENSNGAG00000012103	Sf3b2	100	98.066	Nannospalax_galili
ENSANAG00000029120	SF3B2	100	93.812	ENSNLEG00000006007	SF3B2	100	93.812	Nomascus_leucogenys
ENSANAG00000029120	SF3B2	77	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
ENSANAG00000029120	SF3B2	100	94.312	ENSODEG00000017764	SF3B2	100	94.312	Octodon_degus
ENSANAG00000029120	SF3B2	97	67.640	ENSONIG00000013068	sf3b2	87	75.626	Oreochromis_niloticus
ENSANAG00000029120	SF3B2	87	81.515	ENSOANG00000012482	SF3B2	97	81.733	Ornithorhynchus_anatinus
ENSANAG00000029120	SF3B2	62	65.434	ENSOCUG00000024154	-	100	65.619	Oryctolagus_cuniculus
ENSANAG00000029120	SF3B2	100	92.746	ENSOCUG00000015722	-	100	92.746	Oryctolagus_cuniculus
ENSANAG00000029120	SF3B2	97	67.455	ENSORLG00000008235	sf3b2	85	74.476	Oryzias_latipes
ENSANAG00000029120	SF3B2	97	67.455	ENSORLG00020005357	sf3b2	88	74.476	Oryzias_latipes_hni
ENSANAG00000029120	SF3B2	97	67.568	ENSORLG00015022454	sf3b2	82	78.323	Oryzias_latipes_hsok
ENSANAG00000029120	SF3B2	97	65.989	ENSOMEG00000017480	sf3b2	88	73.691	Oryzias_melastigma
ENSANAG00000029120	SF3B2	100	92.411	ENSOGAG00000005799	SF3B2	98	93.249	Otolemur_garnettii
ENSANAG00000029120	SF3B2	100	93.559	ENSOARG00000002125	SF3B2	100	97.696	Ovis_aries
ENSANAG00000029120	SF3B2	100	99.107	ENSPPAG00000007359	SF3B2	100	99.107	Pan_paniscus
ENSANAG00000029120	SF3B2	100	98.109	ENSPPRG00000013334	SF3B2	100	98.109	Panthera_pardus
ENSANAG00000029120	SF3B2	100	97.998	ENSPTIG00000015022	SF3B2	100	97.998	Panthera_tigris_altaica
ENSANAG00000029120	SF3B2	100	99.107	ENSPTRG00000003912	SF3B2	100	99.107	Pan_troglodytes
ENSANAG00000029120	SF3B2	100	99.219	ENSPANG00000008593	SF3B2	100	99.219	Papio_anubis
ENSANAG00000029120	SF3B2	97	67.703	ENSPKIG00000016576	sf3b2	86	81.517	Paramormyrops_kingsleyae
ENSANAG00000029120	SF3B2	93	80.833	ENSPSIG00000003158	SF3B2	100	88.493	Pelodiscus_sinensis
ENSANAG00000029120	SF3B2	84	67.806	ENSPMGG00000000819	sf3b2	86	67.628	Periophthalmus_magnuspinnatus
ENSANAG00000029120	SF3B2	100	98.180	ENSPEMG00000015437	Sf3b2	100	98.180	Peromyscus_maniculatus_bairdii
ENSANAG00000029120	SF3B2	93	83.558	ENSPEMG00000015451	-	100	83.578	Peromyscus_maniculatus_bairdii
ENSANAG00000029120	SF3B2	95	85.830	ENSPCIG00000008381	SF3B2	96	89.171	Phascolarctos_cinereus
ENSANAG00000029120	SF3B2	97	68.836	ENSPFOG00000002552	sf3b2	86	74.211	Poecilia_formosa
ENSANAG00000029120	SF3B2	97	68.836	ENSPLAG00000001471	sf3b2	86	74.342	Poecilia_latipinna
ENSANAG00000029120	SF3B2	97	67.580	ENSPMEG00000013180	sf3b2	86	74.177	Poecilia_mexicana
ENSANAG00000029120	SF3B2	84	71.995	ENSPREG00000002665	sf3b2	86	73.587	Poecilia_reticulata
ENSANAG00000029120	SF3B2	75	97.321	ENSPPYG00000003034	-	99	97.321	Pongo_abelii
ENSANAG00000029120	SF3B2	100	97.219	ENSPCAG00000005129	SF3B2	100	97.219	Procavia_capensis
ENSANAG00000029120	SF3B2	100	98.661	ENSPCOG00000025375	SF3B2	100	98.661	Propithecus_coquereli
ENSANAG00000029120	SF3B2	56	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSANAG00000029120	SF3B2	60	99.561	ENSPVAG00000005466	-	88	99.561	Pteropus_vampyrus
ENSANAG00000029120	SF3B2	81	73.407	ENSPNYG00000023594	sf3b2	93	72.802	Pundamilia_nyererei
ENSANAG00000029120	SF3B2	97	67.303	ENSPNAG00000001891	sf3b2	86	73.342	Pygocentrus_nattereri
ENSANAG00000029120	SF3B2	100	97.725	ENSRNOG00000020412	Sf3b2	100	97.725	Rattus_norvegicus
ENSANAG00000029120	SF3B2	100	99.107	ENSRBIG00000034065	SF3B2	100	99.107	Rhinopithecus_bieti
ENSANAG00000029120	SF3B2	100	99.107	ENSRROG00000034496	SF3B2	100	99.107	Rhinopithecus_roxellana
ENSANAG00000029120	SF3B2	100	97.241	ENSSBOG00000026337	SF3B2	100	97.241	Saimiri_boliviensis_boliviensis
ENSANAG00000029120	SF3B2	96	69.686	ENSSHAG00000018043	-	100	70.233	Sarcophilus_harrisii
ENSANAG00000029120	SF3B2	85	86.031	ENSSHAG00000010933	-	84	86.554	Sarcophilus_harrisii
ENSANAG00000029120	SF3B2	97	67.960	ENSSFOG00015021125	sf3b2	86	74.319	Scleropages_formosus
ENSANAG00000029120	SF3B2	60	87.666	ENSSMAG00000004079	sf3b2	88	74.935	Scophthalmus_maximus
ENSANAG00000029120	SF3B2	60	88.425	ENSSDUG00000008499	sf3b2	85	71.355	Seriola_dumerili
ENSANAG00000029120	SF3B2	60	88.425	ENSSLDG00000006838	sf3b2	86	75.033	Seriola_lalandi_dorsalis
ENSANAG00000029120	SF3B2	53	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
ENSANAG00000029120	SF3B2	100	80.177	ENSSPUG00000009198	SF3B2	85	84.687	Sphenodon_punctatus
ENSANAG00000029120	SF3B2	97	68.182	ENSSPAG00000004406	sf3b2	86	75.032	Stegastes_partitus
ENSANAG00000029120	SF3B2	100	97.108	ENSSSCG00000012957	SF3B2	100	97.108	Sus_scrofa
ENSANAG00000029120	SF3B2	97	56.073	ENSTRUG00000007611	sf3b2	88	71.763	Takifugu_rubripes
ENSANAG00000029120	SF3B2	86	70.077	ENSTNIG00000007441	sf3b2	88	69.612	Tetraodon_nigroviridis
ENSANAG00000029120	SF3B2	91	93.103	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSANAG00000029120	SF3B2	100	97.553	ENSTTRG00000014339	SF3B2	100	97.553	Tursiops_truncatus
ENSANAG00000029120	SF3B2	100	96.111	ENSUAMG00000020754	SF3B2	99	97.439	Ursus_americanus
ENSANAG00000029120	SF3B2	100	98.109	ENSUMAG00000010994	SF3B2	100	98.109	Ursus_maritimus
ENSANAG00000029120	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	63	99.153	Vicugna_pacos
ENSANAG00000029120	SF3B2	100	97.887	ENSVVUG00000027029	SF3B2	100	97.887	Vulpes_vulpes
ENSANAG00000029120	SF3B2	87	71.907	ENSXETG00000008422	sf3b2	87	78.540	Xenopus_tropicalis
ENSANAG00000029120	SF3B2	72	78.571	ENSXCOG00000008943	sf3b2	84	78.095	Xiphophorus_couchianus
ENSANAG00000029120	SF3B2	60	87.736	ENSXMAG00000008467	sf3b2	86	72.477	Xiphophorus_maculatus