EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000029353 (Gene tree)
Gene ID: 105723926
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 44853 bases
Position: chrKZ201076.1:9548937-9593789
Accession: 105723926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000023203	MRP-S27	PF10037.9	4.7e-11	1	1
ENSANAP00000023207	MRP-S27	PF10037.9	4.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000041111	PTCD2-202	840	-	ENSANAP00000023205	279 (aa)	-	A0A2K5DQF6
ENSANAT00000041118	PTCD2-204	651	-	ENSANAP00000023212	216 (aa)	-	A0A2K5DQR3
ENSANAT00000041113	PTCD2-203	2020	XM_012462184	ENSANAP00000023207	388 (aa)	XP_012317607	A0A2K5DQQ8
ENSANAT00000041109	PTCD2-201	1167	XM_012462185	ENSANAP00000023203	388 (aa)	XP_012317608	A0A2K5DQQ8

Gene Model

Click here to download ENSANAG00000029353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000029353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000029353	PTCD2	100	87.113	ENSG00000049883	PTCD2	100	87.113	Homo_sapiens
ENSANAG00000029353	PTCD2	90	47.126	ENSAPOG00000020682	ptcd2	91	47.126	Acanthochromis_polyacanthus
ENSANAG00000029353	PTCD2	99	79.481	ENSAMEG00000007194	PTCD2	99	79.481	Ailuropoda_melanoleuca
ENSANAG00000029353	PTCD2	89	40.974	ENSACIG00000002053	ptcd2	100	40.974	Amphilophus_citrinellus
ENSANAG00000029353	PTCD2	90	46.264	ENSAOCG00000006616	ptcd2	89	46.264	Amphiprion_ocellaris
ENSANAG00000029353	PTCD2	90	46.264	ENSAPEG00000022926	ptcd2	89	46.264	Amphiprion_percula
ENSANAG00000029353	PTCD2	99	56.072	ENSACAG00000009747	PTCD2	97	56.072	Anolis_carolinensis
ENSANAG00000029353	PTCD2	97	42.706	ENSACLG00000027742	ptcd2	94	42.706	Astatotilapia_calliptera
ENSANAG00000029353	PTCD2	88	43.567	ENSAMXG00000029404	ptcd2	89	43.567	Astyanax_mexicanus
ENSANAG00000029353	PTCD2	99	82.552	ENSBTAG00000014675	PTCD2	100	82.552	Bos_taurus
ENSANAG00000029353	PTCD2	100	95.619	ENSCJAG00000016364	PTCD2	100	95.619	Callithrix_jacchus
ENSANAG00000029353	PTCD2	99	78.961	ENSCAFG00000007982	PTCD2	90	78.961	Canis_familiaris
ENSANAG00000029353	PTCD2	89	80.636	ENSCAFG00020019147	PTCD2	97	80.636	Canis_lupus_dingo
ENSANAG00000029353	PTCD2	99	83.073	ENSCHIG00000017118	PTCD2	100	83.073	Capra_hircus
ENSANAG00000029353	PTCD2	99	76.501	ENSCPOG00000040168	PTCD2	100	76.501	Cavia_porcellus
ENSANAG00000029353	PTCD2	100	95.619	ENSCCAG00000029389	-	100	95.619	Cebus_capucinus
ENSANAG00000029353	PTCD2	81	89.776	ENSCCAG00000021996	-	98	87.147	Cebus_capucinus
ENSANAG00000029353	PTCD2	99	86.423	ENSCATG00000019069	PTCD2	100	86.423	Cercocebus_atys
ENSANAG00000029353	PTCD2	99	74.674	ENSCLAG00000000072	PTCD2	100	74.674	Chinchilla_lanigera
ENSANAG00000029353	PTCD2	99	89.295	ENSCSAG00000015623	PTCD2	100	89.295	Chlorocebus_sabaeus
ENSANAG00000029353	PTCD2	89	58.621	ENSCHOG00000010634	PTCD2	100	58.621	Choloepus_hoffmanni
ENSANAG00000029353	PTCD2	100	55.385	ENSCPBG00000000216	PTCD2	100	55.385	Chrysemys_picta_bellii
ENSANAG00000029353	PTCD2	100	87.371	ENSCANG00000035636	PTCD2	100	87.371	Colobus_angolensis_palliatus
ENSANAG00000029353	PTCD2	99	74.093	ENSCGRG00001015289	Ptcd2	84	74.093	Cricetulus_griseus_chok1gshd
ENSANAG00000029353	PTCD2	99	74.093	ENSCGRG00000006193	Ptcd2	84	74.093	Cricetulus_griseus_crigri
ENSANAG00000029353	PTCD2	90	44.253	ENSCVAG00000001285	ptcd2	89	44.253	Cyprinodon_variegatus
ENSANAG00000029353	PTCD2	93	45.429	ENSDARG00000035391	ptcd2	94	45.429	Danio_rerio
ENSANAG00000029353	PTCD2	99	77.285	ENSDNOG00000008719	PTCD2	100	77.285	Dasypus_novemcinctus
ENSANAG00000029353	PTCD2	99	76.744	ENSDORG00000004921	Ptcd2	100	76.744	Dipodomys_ordii
ENSANAG00000029353	PTCD2	99	67.784	ENSETEG00000016542	PTCD2	99	67.784	Echinops_telfairi
ENSANAG00000029353	PTCD2	99	80.940	ENSEASG00005018038	PTCD2	100	80.940	Equus_asinus_asinus
ENSANAG00000029353	PTCD2	100	79.949	ENSECAG00000007022	PTCD2	100	79.949	Equus_caballus
ENSANAG00000029353	PTCD2	99	74.219	ENSEEUG00000014031	PTCD2	99	74.219	Erinaceus_europaeus
ENSANAG00000029353	PTCD2	98	47.644	ENSELUG00000003584	ptcd2	99	47.644	Esox_lucius
ENSANAG00000029353	PTCD2	99	73.643	ENSFCAG00000045432	PTCD2	83	73.643	Felis_catus
ENSANAG00000029353	PTCD2	84	51.682	ENSFALG00000010299	PTCD2	99	51.682	Ficedula_albicollis
ENSANAG00000029353	PTCD2	99	76.501	ENSFDAG00000018461	PTCD2	100	76.501	Fukomys_damarensis
ENSANAG00000029353	PTCD2	90	49.573	ENSGMOG00000003637	ptcd2	91	49.573	Gadus_morhua
ENSANAG00000029353	PTCD2	91	50.000	ENSGALG00000038260	PTCD2	93	50.000	Gallus_gallus
ENSANAG00000029353	PTCD2	100	58.718	ENSGAGG00000021952	PTCD2	100	58.718	Gopherus_agassizii
ENSANAG00000029353	PTCD2	100	87.371	ENSGGOG00000010695	PTCD2	100	87.371	Gorilla_gorilla
ENSANAG00000029353	PTCD2	97	42.706	ENSHBUG00000009191	ptcd2	94	42.706	Haplochromis_burtoni
ENSANAG00000029353	PTCD2	99	75.979	ENSHGLG00000001234	PTCD2	100	75.979	Heterocephalus_glaber_female
ENSANAG00000029353	PTCD2	99	75.979	ENSHGLG00100015419	PTCD2	100	75.979	Heterocephalus_glaber_male
ENSANAG00000029353	PTCD2	97	45.358	ENSHCOG00000001703	ptcd2	95	45.358	Hippocampus_comes
ENSANAG00000029353	PTCD2	84	44.343	ENSIPUG00000006080	ptcd2	91	44.126	Ictalurus_punctatus
ENSANAG00000029353	PTCD2	98	79.581	ENSSTOG00000006596	PTCD2	99	79.581	Ictidomys_tridecemlineatus
ENSANAG00000029353	PTCD2	99	78.590	ENSJJAG00000024388	Ptcd2	100	78.590	Jaculus_jaculus
ENSANAG00000029353	PTCD2	97	40.318	ENSKMAG00000009329	ptcd2	98	40.318	Kryptolebias_marmoratus
ENSANAG00000029353	PTCD2	97	43.501	ENSLBEG00000024871	ptcd2	94	43.501	Labrus_bergylta
ENSANAG00000029353	PTCD2	96	53.968	ENSLOCG00000011122	ptcd2	98	53.968	Lepisosteus_oculatus
ENSANAG00000029353	PTCD2	80	80.064	ENSLAFG00000004115	PTCD2	100	80.064	Loxodonta_africana
ENSANAG00000029353	PTCD2	100	87.113	ENSMFAG00000031516	PTCD2	100	87.113	Macaca_fascicularis
ENSANAG00000029353	PTCD2	99	86.945	ENSMNEG00000007537	PTCD2	100	86.945	Macaca_nemestrina
ENSANAG00000029353	PTCD2	100	86.598	ENSMLEG00000031093	PTCD2	100	86.598	Mandrillus_leucophaeus
ENSANAG00000029353	PTCD2	97	46.684	ENSMAMG00000018529	ptcd2	96	46.684	Mastacembelus_armatus
ENSANAG00000029353	PTCD2	97	42.706	ENSMZEG00005003625	ptcd2	94	42.706	Maylandia_zebra
ENSANAG00000029353	PTCD2	90	50.862	ENSMGAG00000005033	PTCD2	100	50.862	Meleagris_gallopavo
ENSANAG00000029353	PTCD2	99	58.486	ENSMAUG00000020253	Ptcd2	100	58.486	Mesocricetus_auratus
ENSANAG00000029353	PTCD2	99	81.137	ENSMICG00000004535	PTCD2	99	81.137	Microcebus_murinus
ENSANAG00000029353	PTCD2	99	74.413	ENSMOCG00000019985	Ptcd2	100	74.413	Microtus_ochrogaster
ENSANAG00000029353	PTCD2	99	56.777	ENSMODG00000001695	PTCD2	100	56.777	Monodelphis_domestica
ENSANAG00000029353	PTCD2	97	46.277	ENSMALG00000022372	ptcd2	96	46.277	Monopterus_albus
ENSANAG00000029353	PTCD2	99	72.585	MGP_CAROLIEiJ_G0018829	Ptcd2	100	72.585	Mus_caroli
ENSANAG00000029353	PTCD2	99	71.802	ENSMUSG00000021650	Ptcd2	100	71.802	Mus_musculus
ENSANAG00000029353	PTCD2	99	75.196	MGP_PahariEiJ_G0015904	Ptcd2	100	75.196	Mus_pahari
ENSANAG00000029353	PTCD2	99	72.585	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.585	Mus_spretus
ENSANAG00000029353	PTCD2	99	81.723	ENSMPUG00000014401	PTCD2	100	81.723	Mustela_putorius_furo
ENSANAG00000029353	PTCD2	99	80.311	ENSMLUG00000007374	PTCD2	99	80.311	Myotis_lucifugus
ENSANAG00000029353	PTCD2	99	74.935	ENSNGAG00000005027	Ptcd2	100	74.935	Nannospalax_galili
ENSANAG00000029353	PTCD2	85	43.636	ENSNBRG00000000092	-	100	43.636	Neolamprologus_brichardi
ENSANAG00000029353	PTCD2	97	42.971	ENSNBRG00000008174	ptcd2	96	42.971	Neolamprologus_brichardi
ENSANAG00000029353	PTCD2	100	87.371	ENSNLEG00000004516	PTCD2	100	87.371	Nomascus_leucogenys
ENSANAG00000029353	PTCD2	99	46.923	ENSMEUG00000014012	-	99	46.923	Notamacropus_eugenii
ENSANAG00000029353	PTCD2	99	73.902	ENSOPRG00000007290	PTCD2	99	73.902	Ochotona_princeps
ENSANAG00000029353	PTCD2	99	78.068	ENSODEG00000016417	PTCD2	100	78.068	Octodon_degus
ENSANAG00000029353	PTCD2	82	44.340	ENSONIG00000011269	ptcd2	90	44.340	Oreochromis_niloticus
ENSANAG00000029353	PTCD2	94	79.178	ENSOCUG00000007970	PTCD2	100	78.068	Oryctolagus_cuniculus
ENSANAG00000029353	PTCD2	89	46.991	ENSORLG00000003851	ptcd2	88	46.821	Oryzias_latipes
ENSANAG00000029353	PTCD2	89	46.418	ENSORLG00020009823	ptcd2	90	46.243	Oryzias_latipes_hni
ENSANAG00000029353	PTCD2	89	46.132	ENSORLG00015016777	ptcd2	99	46.686	Oryzias_latipes_hsok
ENSANAG00000029353	PTCD2	93	42.257	ENSOMEG00000012396	ptcd2	92	42.257	Oryzias_melastigma
ENSANAG00000029353	PTCD2	99	74.677	ENSOGAG00000008390	PTCD2	99	74.677	Otolemur_garnettii
ENSANAG00000029353	PTCD2	99	82.429	ENSOARG00000005087	PTCD2	99	82.429	Ovis_aries
ENSANAG00000029353	PTCD2	100	87.113	ENSPPAG00000028480	PTCD2	100	87.113	Pan_paniscus
ENSANAG00000029353	PTCD2	100	86.856	ENSPTRG00000016968	PTCD2	100	86.856	Pan_troglodytes
ENSANAG00000029353	PTCD2	89	87.826	ENSPANG00000006611	PTCD2	89	87.826	Papio_anubis
ENSANAG00000029353	PTCD2	91	48.034	ENSPKIG00000019896	ptcd2	93	48.034	Paramormyrops_kingsleyae
ENSANAG00000029353	PTCD2	82	59.621	ENSPSIG00000014559	PTCD2	98	59.621	Pelodiscus_sinensis
ENSANAG00000029353	PTCD2	99	74.545	ENSPEMG00000000884	Ptcd2	100	74.545	Peromyscus_maniculatus_bairdii
ENSANAG00000029353	PTCD2	99	59.375	ENSPCIG00000029047	PTCD2	100	59.375	Phascolarctos_cinereus
ENSANAG00000029353	PTCD2	83	43.789	ENSPLAG00000010456	ptcd2	91	43.391	Poecilia_latipinna
ENSANAG00000029353	PTCD2	90	43.391	ENSPREG00000021797	ptcd2	88	43.391	Poecilia_reticulata
ENSANAG00000029353	PTCD2	99	75.969	ENSPPYG00000015543	PTCD2	99	75.969	Pongo_abelii
ENSANAG00000029353	PTCD2	80	67.628	ENSPCAG00000006806	PTCD2	99	67.628	Procavia_capensis
ENSANAG00000029353	PTCD2	99	77.979	ENSPVAG00000010935	PTCD2	99	77.979	Pteropus_vampyrus
ENSANAG00000029353	PTCD2	97	42.706	ENSPNYG00000003122	ptcd2	94	42.706	Pundamilia_nyererei
ENSANAG00000029353	PTCD2	93	47.514	ENSPNAG00000021490	ptcd2	94	47.790	Pygocentrus_nattereri
ENSANAG00000029353	PTCD2	99	73.629	ENSRNOG00000028403	Ptcd2	100	73.629	Rattus_norvegicus
ENSANAG00000029353	PTCD2	100	82.732	ENSRBIG00000032929	PTCD2	100	82.732	Rhinopithecus_bieti
ENSANAG00000029353	PTCD2	99	87.728	ENSRROG00000000080	PTCD2	100	87.728	Rhinopithecus_roxellana
ENSANAG00000029353	PTCD2	99	93.211	ENSSBOG00000018911	PTCD2	100	93.211	Saimiri_boliviensis_boliviensis
ENSANAG00000029353	PTCD2	99	61.198	ENSSHAG00000003833	PTCD2	99	61.198	Sarcophilus_harrisii
ENSANAG00000029353	PTCD2	87	46.884	ENSSFOG00015015415	ptcd2	87	46.884	Scleropages_formosus
ENSANAG00000029353	PTCD2	89	42.651	ENSSMAG00000010350	ptcd2	90	42.651	Scophthalmus_maximus
ENSANAG00000029353	PTCD2	97	45.623	ENSSDUG00000008142	ptcd2	91	45.623	Seriola_dumerili
ENSANAG00000029353	PTCD2	97	45.889	ENSSLDG00000015284	ptcd2	96	45.889	Seriola_lalandi_dorsalis
ENSANAG00000029353	PTCD2	80	71.521	ENSSARG00000004983	PTCD2	99	71.521	Sorex_araneus
ENSANAG00000029353	PTCD2	99	53.003	ENSSPUG00000000176	PTCD2	96	53.003	Sphenodon_punctatus
ENSANAG00000029353	PTCD2	90	45.402	ENSSPAG00000008591	ptcd2	89	45.402	Stegastes_partitus
ENSANAG00000029353	PTCD2	99	83.896	ENSSSCG00000016975	PTCD2	90	83.896	Sus_scrofa
ENSANAG00000029353	PTCD2	89	51.594	ENSTGUG00000005705	PTCD2	99	51.594	Taeniopygia_guttata
ENSANAG00000029353	PTCD2	99	77.778	ENSTBEG00000016559	PTCD2	99	77.979	Tupaia_belangeri
ENSANAG00000029353	PTCD2	99	81.912	ENSTTRG00000011851	PTCD2	99	81.912	Tursiops_truncatus
ENSANAG00000029353	PTCD2	99	79.740	ENSUAMG00000007583	PTCD2	90	79.740	Ursus_americanus
ENSANAG00000029353	PTCD2	99	79.634	ENSUMAG00000007666	PTCD2	100	79.634	Ursus_maritimus
ENSANAG00000029353	PTCD2	99	81.395	ENSVPAG00000009597	PTCD2	99	81.395	Vicugna_pacos
ENSANAG00000029353	PTCD2	99	79.112	ENSVVUG00000007299	-	100	79.112	Vulpes_vulpes
ENSANAG00000029353	PTCD2	93	52.222	ENSXETG00000031652	PTCD2	94	52.222	Xenopus_tropicalis
ENSANAG00000029353	PTCD2	83	44.410	ENSXMAG00000005940	ptcd2	82	43.678	Xiphophorus_maculatus