EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000029440 (Gene tree)
Gene ID: 105732743
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 44965 bases
Position: chrKZ202533.1:8529075-8574039
Accession: 105732743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000023398	RRM_1	PF00076.22	1.1e-38	1	3
ENSANAP00000023398	RRM_1	PF00076.22	1.1e-38	2	3
ENSANAP00000023398	RRM_1	PF00076.22	1.1e-38	3	3
ENSANAP00000023393	RRM_1	PF00076.22	3.5e-38	1	3
ENSANAP00000023393	RRM_1	PF00076.22	3.5e-38	2	3
ENSANAP00000023393	RRM_1	PF00076.22	3.5e-38	3	3
ENSANAP00000023386	RRM_1	PF00076.22	5.6e-38	1	3
ENSANAP00000023386	RRM_1	PF00076.22	5.6e-38	2	3
ENSANAP00000023386	RRM_1	PF00076.22	5.6e-38	3	3
ENSANAP00000023387	RRM_1	PF00076.22	5.6e-38	1	3
ENSANAP00000023387	RRM_1	PF00076.22	5.6e-38	2	3
ENSANAP00000023387	RRM_1	PF00076.22	5.6e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000041301	RBM47-203	1575	-	ENSANAP00000023393	524 (aa)	-	A0A2K5DR06
ENSANAT00000041306	RBM47-204	1182	-	ENSANAP00000023398	393 (aa)	-	A0A2K5DR11
ENSANAT00000041294	RBM47-201	4793	XM_012474972	ENSANAP00000023386	593 (aa)	XP_012330395	A0A2K5DQY7
ENSANAT00000041295	RBM47-202	4650	XM_012474971	ENSANAP00000023387	593 (aa)	XP_012330394	A0A2K5DQY7

Gene Model

Click here to download ENSANAG00000029440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000029440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000029440	RBM47	87	68.300	ENSANAG00000019974	A1CF	74	59.955
ENSANAG00000029440	RBM47	81	43.653	ENSANAG00000034181	-	75	38.310
ENSANAG00000029440	RBM47	57	44.444	ENSANAG00000035822	-	73	38.629
ENSANAG00000029440	RBM47	76	74.333	ENSANAG00000029193	RBM46	64	74.333
ENSANAG00000029440	RBM47	81	55.418	ENSANAG00000036315	-	76	46.983
ENSANAG00000029440	RBM47	52	39.024	ENSANAG00000034596	-	57	37.864
ENSANAG00000029440	RBM47	52	42.927	ENSANAG00000037212	-	58	42.927
ENSANAG00000029440	RBM47	77	55.049	ENSANAG00000020675	SYNCRIP	79	45.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000029440	RBM47	100	98.664	ENSG00000163694	RBM47	100	99.078	Homo_sapiens
ENSANAG00000029440	RBM47	100	84.000	ENSAPOG00000011062	rbm47	100	82.933	Acanthochromis_polyacanthus
ENSANAG00000029440	RBM47	100	97.067	ENSAMEG00000009672	RBM47	100	95.973	Ailuropoda_melanoleuca
ENSANAG00000029440	RBM47	100	84.533	ENSACIG00000011531	rbm47	100	83.467	Amphilophus_citrinellus
ENSANAG00000029440	RBM47	100	81.330	ENSAOCG00000022245	rbm47	100	82.933	Amphiprion_ocellaris
ENSANAG00000029440	RBM47	100	81.330	ENSAPEG00000018304	rbm47	100	82.933	Amphiprion_percula
ENSANAG00000029440	RBM47	100	82.519	ENSATEG00000018400	rbm47	100	81.234	Anabas_testudineus
ENSANAG00000029440	RBM47	100	88.423	ENSAPLG00000013974	RBM47	100	88.087	Anas_platyrhynchos
ENSANAG00000029440	RBM47	100	86.667	ENSACAG00000011833	RBM47	100	86.000	Anolis_carolinensis
ENSANAG00000029440	RBM47	100	82.429	ENSACLG00000016902	rbm47	100	81.395	Astatotilapia_calliptera
ENSANAG00000029440	RBM47	98	79.699	ENSAMXG00000021794	rbm47	100	80.256	Astyanax_mexicanus
ENSANAG00000029440	RBM47	100	97.143	ENSBTAG00000002356	RBM47	100	97.143	Bos_taurus
ENSANAG00000029440	RBM47	100	99.327	ENSCJAG00000019385	RBM47	100	99.327	Callithrix_jacchus
ENSANAG00000029440	RBM47	96	92.832	ENSCAFG00000015898	RBM47	100	92.953	Canis_familiaris
ENSANAG00000029440	RBM47	90	94.051	ENSCAFG00020010558	RBM47	94	93.899	Canis_lupus_dingo
ENSANAG00000029440	RBM47	100	97.143	ENSCHIG00000026214	RBM47	100	97.143	Capra_hircus
ENSANAG00000029440	RBM47	90	84.146	ENSTSYG00000033612	RBM47	93	89.381	Carlito_syrichta
ENSANAG00000029440	RBM47	100	87.395	ENSCAPG00000008426	RBM47	100	87.731	Cavia_aperea
ENSANAG00000029440	RBM47	100	96.267	ENSCPOG00000014100	RBM47	100	94.286	Cavia_porcellus
ENSANAG00000029440	RBM47	99	68.792	ENSCCAG00000024397	-	99	68.121	Cebus_capucinus
ENSANAG00000029440	RBM47	100	99.327	ENSCCAG00000030129	-	100	99.327	Cebus_capucinus
ENSANAG00000029440	RBM47	100	98.855	ENSCATG00000042064	RBM47	100	98.855	Cercocebus_atys
ENSANAG00000029440	RBM47	100	95.733	ENSCLAG00000001684	RBM47	100	94.937	Chinchilla_lanigera
ENSANAG00000029440	RBM47	100	98.651	ENSCSAG00000017060	RBM47	100	98.651	Chlorocebus_sabaeus
ENSANAG00000029440	RBM47	87	97.674	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSANAG00000029440	RBM47	100	92.819	ENSCPBG00000013831	RBM47	100	90.000	Chrysemys_picta_bellii
ENSANAG00000029440	RBM47	100	98.664	ENSCANG00000019997	RBM47	100	98.664	Colobus_angolensis_palliatus
ENSANAG00000029440	RBM47	100	94.444	ENSCGRG00001000623	-	100	93.624	Cricetulus_griseus_chok1gshd
ENSANAG00000029440	RBM47	100	88.068	ENSCGRG00001020102	-	100	87.879	Cricetulus_griseus_chok1gshd
ENSANAG00000029440	RBM47	100	87.689	ENSCGRG00000014760	-	100	87.500	Cricetulus_griseus_crigri
ENSANAG00000029440	RBM47	100	93.915	ENSCGRG00000007762	-	100	95.570	Cricetulus_griseus_crigri
ENSANAG00000029440	RBM47	95	82.804	ENSCSEG00000004545	rbm47	100	74.252	Cynoglossus_semilaevis
ENSANAG00000029440	RBM47	98	83.607	ENSCVAG00000020144	rbm47	100	82.804	Cyprinodon_variegatus
ENSANAG00000029440	RBM47	98	80.702	ENSDARG00000061985	rbm47	100	75.654	Danio_rerio
ENSANAG00000029440	RBM47	100	92.269	ENSDNOG00000046854	RBM47	100	94.118	Dasypus_novemcinctus
ENSANAG00000029440	RBM47	100	93.980	ENSDORG00000010144	Rbm47	100	94.314	Dipodomys_ordii
ENSANAG00000029440	RBM47	100	93.478	ENSETEG00000009194	RBM47	100	94.649	Echinops_telfairi
ENSANAG00000029440	RBM47	95	71.429	ENSEBUG00000011912	rbm47	99	71.429	Eptatretus_burgeri
ENSANAG00000029440	RBM47	100	96.639	ENSEASG00005008443	RBM47	100	96.639	Equus_asinus_asinus
ENSANAG00000029440	RBM47	100	96.639	ENSECAG00000004400	RBM47	100	96.639	Equus_caballus
ENSANAG00000029440	RBM47	76	95.671	ENSEEUG00000001194	RBM47	75	95.671	Erinaceus_europaeus
ENSANAG00000029440	RBM47	99	82.493	ENSELUG00000006148	rbm47	97	81.530	Esox_lucius
ENSANAG00000029440	RBM47	100	96.296	ENSFCAG00000012399	RBM47	100	96.296	Felis_catus
ENSANAG00000029440	RBM47	100	89.950	ENSFALG00000002861	RBM47	100	91.122	Ficedula_albicollis
ENSANAG00000029440	RBM47	100	94.400	ENSFDAG00000016326	RBM47	100	92.941	Fukomys_damarensis
ENSANAG00000029440	RBM47	100	80.977	ENSFHEG00000007938	rbm47	100	74.667	Fundulus_heteroclitus
ENSANAG00000029440	RBM47	100	80.759	ENSGMOG00000014802	rbm47	100	79.345	Gadus_morhua
ENSANAG00000029440	RBM47	95	90.426	ENSGALG00000014267	RBM47	99	92.287	Gallus_gallus
ENSANAG00000029440	RBM47	96	82.632	ENSGAFG00000020571	rbm47	98	82.181	Gambusia_affinis
ENSANAG00000029440	RBM47	100	79.487	ENSGACG00000016223	rbm47	100	78.718	Gasterosteus_aculeatus
ENSANAG00000029440	RBM47	100	90.333	ENSGAGG00000020051	RBM47	100	90.167	Gopherus_agassizii
ENSANAG00000029440	RBM47	100	98.855	ENSGGOG00000001367	RBM47	100	98.855	Gorilla_gorilla
ENSANAG00000029440	RBM47	100	82.429	ENSHBUG00000003520	rbm47	100	81.395	Haplochromis_burtoni
ENSANAG00000029440	RBM47	100	74.476	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSANAG00000029440	RBM47	100	93.717	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSANAG00000029440	RBM47	95	89.600	ENSHGLG00100003071	-	100	83.502	Heterocephalus_glaber_male
ENSANAG00000029440	RBM47	95	84.309	ENSHCOG00000002074	rbm47	99	82.540	Hippocampus_comes
ENSANAG00000029440	RBM47	100	80.829	ENSIPUG00000004743	rbm47	100	81.551	Ictalurus_punctatus
ENSANAG00000029440	RBM47	100	96.578	ENSSTOG00000004727	RBM47	100	96.578	Ictidomys_tridecemlineatus
ENSANAG00000029440	RBM47	100	93.289	ENSJJAG00000013823	Rbm47	100	94.463	Jaculus_jaculus
ENSANAG00000029440	RBM47	100	84.169	ENSKMAG00000000084	rbm47	100	82.850	Kryptolebias_marmoratus
ENSANAG00000029440	RBM47	100	82.713	ENSLBEG00000008436	rbm47	100	81.481	Labrus_bergylta
ENSANAG00000029440	RBM47	100	88.032	ENSLACG00000007196	RBM47	100	84.422	Latimeria_chalumnae
ENSANAG00000029440	RBM47	95	87.166	ENSLOCG00000012966	rbm47	95	85.561	Lepisosteus_oculatus
ENSANAG00000029440	RBM47	100	94.454	ENSLAFG00000011998	RBM47	100	94.790	Loxodonta_africana
ENSANAG00000029440	RBM47	100	98.855	ENSMFAG00000037967	RBM47	100	98.855	Macaca_fascicularis
ENSANAG00000029440	RBM47	100	98.651	ENSMMUG00000012036	RBM47	100	98.964	Macaca_mulatta
ENSANAG00000029440	RBM47	100	98.664	ENSMNEG00000040774	RBM47	100	98.664	Macaca_nemestrina
ENSANAG00000029440	RBM47	100	99.365	ENSMLEG00000041432	RBM47	100	99.365	Mandrillus_leucophaeus
ENSANAG00000029440	RBM47	100	82.732	ENSMAMG00000019143	rbm47	100	81.443	Mastacembelus_armatus
ENSANAG00000029440	RBM47	100	82.429	ENSMZEG00005023659	rbm47	100	81.395	Maylandia_zebra
ENSANAG00000029440	RBM47	100	91.000	ENSMGAG00000012226	RBM47	100	90.333	Meleagris_gallopavo
ENSANAG00000029440	RBM47	100	93.624	ENSMAUG00000006493	Rbm47	100	95.570	Mesocricetus_auratus
ENSANAG00000029440	RBM47	100	89.207	ENSMICG00000026417	RBM47	100	90.556	Microcebus_murinus
ENSANAG00000029440	RBM47	100	93.950	ENSMOCG00000021170	Rbm47	100	96.203	Microtus_ochrogaster
ENSANAG00000029440	RBM47	100	81.137	ENSMMOG00000007260	rbm47	100	79.692	Mola_mola
ENSANAG00000029440	RBM47	100	81.726	ENSMODG00000020561	-	100	80.776	Monodelphis_domestica
ENSANAG00000029440	RBM47	79	81.073	ENSMODG00000015426	-	99	78.549	Monodelphis_domestica
ENSANAG00000029440	RBM47	100	92.533	ENSMODG00000007003	RBM47	100	91.077	Monodelphis_domestica
ENSANAG00000029440	RBM47	100	82.979	ENSMALG00000005167	rbm47	100	83.245	Monopterus_albus
ENSANAG00000029440	RBM47	100	93.277	MGP_CAROLIEiJ_G0027258	Rbm47	100	94.304	Mus_caroli
ENSANAG00000029440	RBM47	100	93.613	ENSMUSG00000070780	Rbm47	100	94.304	Mus_musculus
ENSANAG00000029440	RBM47	100	93.445	MGP_PahariEiJ_G0017040	Rbm47	100	94.937	Mus_pahari
ENSANAG00000029440	RBM47	100	93.109	MGP_SPRETEiJ_G0028253	Rbm47	100	94.304	Mus_spretus
ENSANAG00000029440	RBM47	100	96.633	ENSMPUG00000006177	RBM47	94	96.633	Mustela_putorius_furo
ENSANAG00000029440	RBM47	100	93.289	ENSMLUG00000000889	RBM47	100	93.456	Myotis_lucifugus
ENSANAG00000029440	RBM47	100	95.479	ENSNGAG00000003325	Rbm47	100	94.958	Nannospalax_galili
ENSANAG00000029440	RBM47	100	82.946	ENSNBRG00000015092	rbm47	100	81.491	Neolamprologus_brichardi
ENSANAG00000029440	RBM47	100	98.473	ENSNLEG00000017151	RBM47	100	98.473	Nomascus_leucogenys
ENSANAG00000029440	RBM47	91	93.575	ENSMEUG00000009516	-	99	86.885	Notamacropus_eugenii
ENSANAG00000029440	RBM47	85	96.250	ENSOPRG00000016507	-	75	96.250	Ochotona_princeps
ENSANAG00000029440	RBM47	100	96.000	ENSODEG00000004873	RBM47	100	94.286	Octodon_degus
ENSANAG00000029440	RBM47	100	81.538	ENSONIG00000009061	rbm47	100	80.612	Oreochromis_niloticus
ENSANAG00000029440	RBM47	100	86.023	ENSOANG00000008978	RBM47	100	87.022	Ornithorhynchus_anatinus
ENSANAG00000029440	RBM47	100	94.790	ENSOCUG00000012034	RBM47	100	94.622	Oryctolagus_cuniculus
ENSANAG00000029440	RBM47	100	84.574	ENSORLG00000005847	rbm47	100	82.804	Oryzias_latipes
ENSANAG00000029440	RBM47	100	84.574	ENSORLG00020005154	rbm47	100	82.804	Oryzias_latipes_hni
ENSANAG00000029440	RBM47	100	84.840	ENSORLG00015000066	rbm47	100	83.069	Oryzias_latipes_hsok
ENSANAG00000029440	RBM47	100	81.234	ENSOMEG00000010730	rbm47	100	83.511	Oryzias_melastigma
ENSANAG00000029440	RBM47	100	89.067	ENSOGAG00000025193	-	100	87.037	Otolemur_garnettii
ENSANAG00000029440	RBM47	100	97.306	ENSOGAG00000029367	-	100	97.306	Otolemur_garnettii
ENSANAG00000029440	RBM47	100	93.421	ENSOARG00000012711	RBM47	100	88.777	Ovis_aries
ENSANAG00000029440	RBM47	100	98.482	ENSPPAG00000029763	RBM47	100	98.482	Pan_paniscus
ENSANAG00000029440	RBM47	100	93.266	ENSPPRG00000012873	RBM47	100	93.266	Panthera_pardus
ENSANAG00000029440	RBM47	85	90.891	ENSPTIG00000017046	RBM47	100	91.683	Panthera_tigris_altaica
ENSANAG00000029440	RBM47	100	98.855	ENSPTRG00000016006	RBM47	100	98.855	Pan_troglodytes
ENSANAG00000029440	RBM47	100	98.855	ENSPANG00000005980	RBM47	100	98.855	Papio_anubis
ENSANAG00000029440	RBM47	90	86.119	ENSPKIG00000005037	rbm47	100	81.299	Paramormyrops_kingsleyae
ENSANAG00000029440	RBM47	97	81.061	ENSPKIG00000013431	RBM47	98	81.039	Paramormyrops_kingsleyae
ENSANAG00000029440	RBM47	95	92.553	ENSPSIG00000017516	RBM47	97	90.789	Pelodiscus_sinensis
ENSANAG00000029440	RBM47	95	83.422	ENSPMGG00000018540	rbm47	100	82.181	Periophthalmus_magnuspinnatus
ENSANAG00000029440	RBM47	100	94.118	ENSPEMG00000011088	Rbm47	100	94.622	Peromyscus_maniculatus_bairdii
ENSANAG00000029440	RBM47	91	86.111	ENSPFOG00000007997	rbm47	100	79.494	Poecilia_formosa
ENSANAG00000029440	RBM47	95	83.511	ENSPLAG00000002072	rbm47	100	82.181	Poecilia_latipinna
ENSANAG00000029440	RBM47	96	87.042	ENSPMEG00000017492	rbm47	100	82.447	Poecilia_mexicana
ENSANAG00000029440	RBM47	96	87.042	ENSPREG00000008456	rbm47	100	82.447	Poecilia_reticulata
ENSANAG00000029440	RBM47	98	84.746	ENSPPYG00000014688	RBM47	100	83.729	Pongo_abelii
ENSANAG00000029440	RBM47	96	96.579	ENSPCAG00000011879	RBM47	81	97.000	Procavia_capensis
ENSANAG00000029440	RBM47	100	92.088	ENSPCOG00000023451	RBM47	100	92.593	Propithecus_coquereli
ENSANAG00000029440	RBM47	100	94.128	ENSPVAG00000003812	RBM47	100	94.966	Pteropus_vampyrus
ENSANAG00000029440	RBM47	100	82.429	ENSPNYG00000022868	rbm47	100	80.977	Pundamilia_nyererei
ENSANAG00000029440	RBM47	98	80.201	ENSPNAG00000007940	rbm47	100	80.256	Pygocentrus_nattereri
ENSANAG00000029440	RBM47	100	93.613	ENSRNOG00000002408	Rbm47	100	93.950	Rattus_norvegicus
ENSANAG00000029440	RBM47	100	98.664	ENSRBIG00000039601	RBM47	100	98.664	Rhinopithecus_bieti
ENSANAG00000029440	RBM47	100	98.664	ENSRROG00000044696	RBM47	100	98.664	Rhinopithecus_roxellana
ENSANAG00000029440	RBM47	100	98.219	ENSSBOG00000028475	RBM47	100	99.379	Saimiri_boliviensis_boliviensis
ENSANAG00000029440	RBM47	100	91.751	ENSSHAG00000017576	RBM47	100	91.751	Sarcophilus_harrisii
ENSANAG00000029440	RBM47	96	80.612	ENSSFOG00015012445	rbm47	100	79.434	Scleropages_formosus
ENSANAG00000029440	RBM47	96	79.737	ENSSFOG00015024101	RBM47	100	78.610	Scleropages_formosus
ENSANAG00000029440	RBM47	100	80.513	ENSSMAG00000009744	rbm47	100	78.974	Scophthalmus_maximus
ENSANAG00000029440	RBM47	100	81.566	ENSSDUG00000022684	rbm47	100	82.540	Seriola_dumerili
ENSANAG00000029440	RBM47	100	80.556	ENSSLDG00000003109	rbm47	100	83.245	Seriola_lalandi_dorsalis
ENSANAG00000029440	RBM47	95	93.931	ENSSARG00000001735	RBM47	75	95.078	Sorex_araneus
ENSANAG00000029440	RBM47	100	87.940	ENSSPUG00000007515	RBM47	100	91.176	Sphenodon_punctatus
ENSANAG00000029440	RBM47	100	82.353	ENSSPAG00000001257	rbm47	100	83.733	Stegastes_partitus
ENSANAG00000029440	RBM47	100	96.639	ENSSSCG00000008796	RBM47	100	96.639	Sus_scrofa
ENSANAG00000029440	RBM47	100	89.447	ENSTGUG00000008705	RBM47	100	90.452	Taeniopygia_guttata
ENSANAG00000029440	RBM47	93	84.658	ENSTRUG00000014050	rbm47	100	83.288	Takifugu_rubripes
ENSANAG00000029440	RBM47	100	82.171	ENSTNIG00000006127	rbm47	100	74.959	Tetraodon_nigroviridis
ENSANAG00000029440	RBM47	95	90.642	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSANAG00000029440	RBM47	100	95.798	ENSTTRG00000002839	RBM47	100	95.798	Tursiops_truncatus
ENSANAG00000029440	RBM47	100	96.465	ENSUAMG00000021346	RBM47	100	96.465	Ursus_americanus
ENSANAG00000029440	RBM47	57	97.260	ENSVPAG00000000641	-	57	97.260	Vicugna_pacos
ENSANAG00000029440	RBM47	96	94.056	ENSVVUG00000014774	RBM47	100	93.121	Vulpes_vulpes
ENSANAG00000029440	RBM47	100	84.590	ENSXETG00000012802	rbm47	100	84.590	Xenopus_tropicalis
ENSANAG00000029440	RBM47	95	83.245	ENSXCOG00000000780	rbm47	100	81.915	Xiphophorus_couchianus
ENSANAG00000029440	RBM47	100	83.245	ENSXMAG00000009874	rbm47	100	81.481	Xiphophorus_maculatus