EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000029513 (Gene tree)
Gene ID: 105704806
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 122336 bases
Position: chrKZ197396.1:439626-561961
Accession: 105704806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000023521	ResIII	PF04851.15	1.3e-11	1	1
ENSANAP00000023521	DEAD	PF00270.29	7.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000041431	HFM1-201	4233	XM_021668317	ENSANAP00000023521	1410 (aa)	XP_021523992	A0A2K5DRD7

Gene Model

Click here to download ENSANAG00000029513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000029513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000029513	HFM1	56	32.625	ENSANAG00000036625	SNRNP200	68	32.625
ENSANAG00000029513	HFM1	53	34.925	ENSANAG00000021476	ASCC3	62	34.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000029513	HFM1	100	91.997	ENSG00000162669	HFM1	100	91.997	Homo_sapiens
ENSANAG00000029513	HFM1	65	63.753	ENSAPOG00000005304	hfm1	100	63.753	Acanthochromis_polyacanthus
ENSANAG00000029513	HFM1	100	83.206	ENSAMEG00000000432	HFM1	100	83.206	Ailuropoda_melanoleuca
ENSANAG00000029513	HFM1	70	60.839	ENSACIG00000021553	hfm1	91	60.839	Amphilophus_citrinellus
ENSANAG00000029513	HFM1	65	64.720	ENSAOCG00000022839	hfm1	100	64.720	Amphiprion_ocellaris
ENSANAG00000029513	HFM1	65	64.369	ENSAPEG00000014316	hfm1	100	64.369	Amphiprion_percula
ENSANAG00000029513	HFM1	66	63.261	ENSATEG00000019181	hfm1	80	62.336	Anabas_testudineus
ENSANAG00000029513	HFM1	100	59.394	ENSAPLG00000013639	HFM1	100	59.394	Anas_platyrhynchos
ENSANAG00000029513	HFM1	72	58.920	ENSACLG00000009033	hfm1	98	63.722	Astatotilapia_calliptera
ENSANAG00000029513	HFM1	92	51.214	ENSAMXG00000006108	hfm1	89	51.214	Astyanax_mexicanus
ENSANAG00000029513	HFM1	100	81.900	ENSBTAG00000020856	HFM1	100	81.900	Bos_taurus
ENSANAG00000029513	HFM1	100	94.355	ENSCJAG00000001843	HFM1	100	94.355	Callithrix_jacchus
ENSANAG00000029513	HFM1	100	82.859	ENSCAFG00000020187	HFM1	100	82.859	Canis_familiaris
ENSANAG00000029513	HFM1	100	83.345	ENSTSYG00000014250	HFM1	100	83.345	Carlito_syrichta
ENSANAG00000029513	HFM1	99	76.618	ENSCPOG00000007421	HFM1	99	76.618	Cavia_porcellus
ENSANAG00000029513	HFM1	100	94.425	ENSCCAG00000033206	HFM1	100	94.425	Cebus_capucinus
ENSANAG00000029513	HFM1	100	91.441	ENSCATG00000030987	HFM1	100	91.441	Cercocebus_atys
ENSANAG00000029513	HFM1	100	78.369	ENSCLAG00000005173	HFM1	99	78.369	Chinchilla_lanigera
ENSANAG00000029513	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSANAG00000029513	HFM1	100	72.149	ENSCGRG00001016995	Hfm1	100	72.149	Cricetulus_griseus_chok1gshd
ENSANAG00000029513	HFM1	100	76.058	ENSCGRG00000017181	Hfm1	100	76.058	Cricetulus_griseus_crigri
ENSANAG00000029513	HFM1	73	57.209	ENSCSEG00000017659	hfm1	97	57.116	Cynoglossus_semilaevis
ENSANAG00000029513	HFM1	50	68.112	ENSCVAG00000005075	hfm1	86	68.112	Cyprinodon_variegatus
ENSANAG00000029513	HFM1	79	54.513	ENSDARG00000104288	hfm1	98	54.513	Danio_rerio
ENSANAG00000029513	HFM1	100	77.995	ENSDNOG00000004776	HFM1	100	77.995	Dasypus_novemcinctus
ENSANAG00000029513	HFM1	100	75.926	ENSDORG00000014661	Hfm1	100	75.926	Dipodomys_ordii
ENSANAG00000029513	HFM1	70	86.290	ENSEASG00005015424	HFM1	97	86.290	Equus_asinus_asinus
ENSANAG00000029513	HFM1	100	81.708	ENSECAG00000024039	HFM1	100	81.708	Equus_caballus
ENSANAG00000029513	HFM1	62	66.228	ENSELUG00000018944	hfm1	97	66.228	Esox_lucius
ENSANAG00000029513	HFM1	100	82.802	ENSFCAG00000029116	HFM1	100	82.802	Felis_catus
ENSANAG00000029513	HFM1	100	59.643	ENSFALG00000001781	HFM1	100	60.055	Ficedula_albicollis
ENSANAG00000029513	HFM1	100	76.794	ENSFDAG00000020816	HFM1	100	76.794	Fukomys_damarensis
ENSANAG00000029513	HFM1	66	58.958	ENSGMOG00000017436	hfm1	100	58.958	Gadus_morhua
ENSANAG00000029513	HFM1	70	62.216	ENSGAFG00000018093	hfm1	92	66.221	Gambusia_affinis
ENSANAG00000029513	HFM1	66	60.415	ENSGACG00000015686	hfm1	100	60.415	Gasterosteus_aculeatus
ENSANAG00000029513	HFM1	100	91.719	ENSGGOG00000038524	HFM1	100	91.719	Gorilla_gorilla
ENSANAG00000029513	HFM1	72	59.942	ENSHBUG00000007309	hfm1	97	60.135	Haplochromis_burtoni
ENSANAG00000029513	HFM1	58	63.358	ENSHCOG00000019632	hfm1	97	63.358	Hippocampus_comes
ENSANAG00000029513	HFM1	65	63.723	ENSIPUG00000017020	hfm1	91	65.150	Ictalurus_punctatus
ENSANAG00000029513	HFM1	100	75.678	ENSJJAG00000017198	Hfm1	100	75.678	Jaculus_jaculus
ENSANAG00000029513	HFM1	62	63.300	ENSKMAG00000002282	hfm1	91	63.300	Kryptolebias_marmoratus
ENSANAG00000029513	HFM1	70	61.061	ENSLBEG00000006759	hfm1	98	64.202	Labrus_bergylta
ENSANAG00000029513	HFM1	66	69.556	ENSLACG00000010698	HFM1	99	65.690	Latimeria_chalumnae
ENSANAG00000029513	HFM1	71	62.981	ENSLOCG00000004931	hfm1	95	63.077	Lepisosteus_oculatus
ENSANAG00000029513	HFM1	52	88.964	ENSLAFG00000015903	-	99	88.964	Loxodonta_africana
ENSANAG00000029513	HFM1	100	88.011	ENSMFAG00000003649	HFM1	100	88.011	Macaca_fascicularis
ENSANAG00000029513	HFM1	100	90.953	ENSMMUG00000006819	HFM1	100	90.953	Macaca_mulatta
ENSANAG00000029513	HFM1	62	64.409	ENSMAMG00000004623	hfm1	97	65.621	Mastacembelus_armatus
ENSANAG00000029513	HFM1	72	58.841	ENSMZEG00005004679	hfm1	98	63.722	Maylandia_zebra
ENSANAG00000029513	HFM1	55	76.645	ENSMGAG00000008437	HFM1	96	76.645	Meleagris_gallopavo
ENSANAG00000029513	HFM1	100	76.283	ENSMAUG00000018858	Hfm1	100	76.283	Mesocricetus_auratus
ENSANAG00000029513	HFM1	100	85.000	ENSMICG00000037935	HFM1	100	85.000	Microcebus_murinus
ENSANAG00000029513	HFM1	100	73.819	ENSMOCG00000014812	Hfm1	100	73.819	Microtus_ochrogaster
ENSANAG00000029513	HFM1	62	64.638	ENSMMOG00000006148	hfm1	95	63.711	Mola_mola
ENSANAG00000029513	HFM1	64	64.629	ENSMALG00000002401	hfm1	96	64.527	Monopterus_albus
ENSANAG00000029513	HFM1	96	71.722	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.722	Mus_caroli
ENSANAG00000029513	HFM1	100	74.931	ENSMUSG00000043410	Hfm1	100	74.931	Mus_musculus
ENSANAG00000029513	HFM1	100	74.653	MGP_PahariEiJ_G0017268	Hfm1	100	74.653	Mus_pahari
ENSANAG00000029513	HFM1	100	74.792	MGP_SPRETEiJ_G0028495	Hfm1	100	74.792	Mus_spretus
ENSANAG00000029513	HFM1	100	79.556	ENSMPUG00000004594	HFM1	100	79.556	Mustela_putorius_furo
ENSANAG00000029513	HFM1	100	80.665	ENSMLUG00000010200	HFM1	100	80.665	Myotis_lucifugus
ENSANAG00000029513	HFM1	69	57.457	ENSNBRG00000002910	hfm1	97	64.649	Neolamprologus_brichardi
ENSANAG00000029513	HFM1	100	87.352	ENSNLEG00000010285	HFM1	100	87.352	Nomascus_leucogenys
ENSANAG00000029513	HFM1	84	62.931	ENSMEUG00000015788	HFM1	84	62.931	Notamacropus_eugenii
ENSANAG00000029513	HFM1	84	75.078	ENSOPRG00000013916	HFM1	84	75.078	Ochotona_princeps
ENSANAG00000029513	HFM1	71	60.348	ENSONIG00000010590	hfm1	99	60.325	Oreochromis_niloticus
ENSANAG00000029513	HFM1	58	65.314	ENSORLG00000026844	hfm1	99	65.314	Oryzias_latipes
ENSANAG00000029513	HFM1	67	55.988	ENSORLG00020002951	hfm1	97	48.154	Oryzias_latipes_hni
ENSANAG00000029513	HFM1	72	58.534	ENSOMEG00000016474	hfm1	75	58.534	Oryzias_melastigma
ENSANAG00000029513	HFM1	85	85.122	ENSOGAG00000032369	HFM1	100	85.122	Otolemur_garnettii
ENSANAG00000029513	HFM1	100	82.500	ENSOARG00000015812	HFM1	100	82.500	Ovis_aries
ENSANAG00000029513	HFM1	92	92.760	ENSPPAG00000024582	HFM1	100	92.760	Pan_paniscus
ENSANAG00000029513	HFM1	100	82.802	ENSPPRG00000003270	HFM1	100	82.802	Panthera_pardus
ENSANAG00000029513	HFM1	100	82.732	ENSPTIG00000018881	HFM1	100	82.732	Panthera_tigris_altaica
ENSANAG00000029513	HFM1	100	91.858	ENSPTRG00000000948	HFM1	100	91.858	Pan_troglodytes
ENSANAG00000029513	HFM1	100	91.301	ENSPANG00000009838	HFM1	100	91.301	Papio_anubis
ENSANAG00000029513	HFM1	62	66.931	ENSPKIG00000003810	hfm1	95	67.273	Paramormyrops_kingsleyae
ENSANAG00000029513	HFM1	59	65.097	ENSPMGG00000011059	hfm1	100	65.097	Periophthalmus_magnuspinnatus
ENSANAG00000029513	HFM1	100	77.361	ENSPEMG00000022852	Hfm1	100	77.361	Peromyscus_maniculatus_bairdii
ENSANAG00000029513	HFM1	100	65.413	ENSPCIG00000014233	HFM1	100	65.413	Phascolarctos_cinereus
ENSANAG00000029513	HFM1	70	61.027	ENSPFOG00000017194	hfm1	99	61.027	Poecilia_formosa
ENSANAG00000029513	HFM1	70	62.157	ENSPLAG00000000571	hfm1	92	62.353	Poecilia_latipinna
ENSANAG00000029513	HFM1	70	62.610	ENSPMEG00000019475	hfm1	92	62.610	Poecilia_mexicana
ENSANAG00000029513	HFM1	70	62.093	ENSPREG00000007803	hfm1	92	65.937	Poecilia_reticulata
ENSANAG00000029513	HFM1	100	91.580	ENSPPYG00000001163	HFM1	100	91.580	Pongo_abelii
ENSANAG00000029513	HFM1	74	81.081	ENSPCAG00000004289	-	74	81.081	Procavia_capensis
ENSANAG00000029513	HFM1	100	74.705	ENSPVAG00000009713	HFM1	100	74.705	Pteropus_vampyrus
ENSANAG00000029513	HFM1	71	59.608	ENSPNYG00000001795	hfm1	98	63.604	Pundamilia_nyererei
ENSANAG00000029513	HFM1	60	66.865	ENSPNAG00000010865	hfm1	83	66.865	Pygocentrus_nattereri
ENSANAG00000029513	HFM1	100	74.097	ENSRNOG00000023299	Hfm1	100	74.097	Rattus_norvegicus
ENSANAG00000029513	HFM1	100	90.953	ENSRROG00000045569	HFM1	100	90.953	Rhinopithecus_roxellana
ENSANAG00000029513	HFM1	100	92.179	ENSSBOG00000027456	HFM1	100	92.179	Saimiri_boliviensis_boliviensis
ENSANAG00000029513	HFM1	61	70.405	ENSSHAG00000014616	-	98	70.405	Sarcophilus_harrisii
ENSANAG00000029513	HFM1	86	55.503	ENSSFOG00015020129	hfm1	96	55.503	Scleropages_formosus
ENSANAG00000029513	HFM1	62	64.819	ENSSMAG00000006907	hfm1	87	64.819	Scophthalmus_maximus
ENSANAG00000029513	HFM1	65	63.668	ENSSDUG00000011424	hfm1	100	63.668	Seriola_dumerili
ENSANAG00000029513	HFM1	66	63.689	ENSSLDG00000016386	hfm1	100	63.689	Seriola_lalandi_dorsalis
ENSANAG00000029513	HFM1	63	65.269	ENSSPAG00000001023	hfm1	100	65.269	Stegastes_partitus
ENSANAG00000029513	HFM1	100	79.043	ENSSSCG00000006912	HFM1	100	79.043	Sus_scrofa
ENSANAG00000029513	HFM1	66	73.800	ENSTGUG00000006172	HFM1	100	73.800	Taeniopygia_guttata
ENSANAG00000029513	HFM1	100	79.652	ENSTTRG00000013933	HFM1	100	79.652	Tursiops_truncatus
ENSANAG00000029513	HFM1	93	80.564	ENSVPAG00000011331	HFM1	93	80.564	Vicugna_pacos
ENSANAG00000029513	HFM1	70	83.300	ENSVVUG00000020760	HFM1	99	83.300	Vulpes_vulpes
ENSANAG00000029513	HFM1	59	65.909	ENSXMAG00000004178	hfm1	92	65.909	Xiphophorus_maculatus