EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000029527 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 2590151 bases
Position: chrKZ201380.1:568466-3158616
Accession: 105714331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000024141	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSANAP00000024148	Fox-1_C	PF12414.8	1.7e-40	1	1
ENSANAP00000024118	Fox-1_C	PF12414.8	1.9e-40	1	1
ENSANAP00000024094	Fox-1_C	PF12414.8	2.6e-40	1	1
ENSANAP00000024092	Fox-1_C	PF12414.8	2.8e-40	1	1
ENSANAP00000024076	Fox-1_C	PF12414.8	3.7e-40	1	1
ENSANAP00000024068	Fox-1_C	PF12414.8	5.2e-40	1	1
ENSANAP00000024187	Fox-1_C	PF12414.8	6.1e-23	1	1
ENSANAP00000024178	Fox-1_C	PF12414.8	9.5e-21	1	1
ENSANAP00000024178	RRM_1	PF00076.22	3.9e-18	1	1
ENSANAP00000024148	RRM_1	PF00076.22	4.1e-18	1	1
ENSANAP00000024141	RRM_1	PF00076.22	4.3e-18	1	1
ENSANAP00000024187	RRM_1	PF00076.22	4.3e-18	1	1
ENSANAP00000024118	RRM_1	PF00076.22	4.7e-18	1	1
ENSANAP00000024076	RRM_1	PF00076.22	5.7e-18	1	1
ENSANAP00000024068	RRM_1	PF00076.22	8e-18	1	1
ENSANAP00000024092	RRM_1	PF00076.22	8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000042011	RBFOX1-203	1176	-	ENSANAP00000024092	391 (aa)	-	A0A2K5DT69
ENSANAT00000042013	RBFOX1-204	1143	-	ENSANAP00000024094	380 (aa)	-	A0A2K5DT20
ENSANAT00000042037	RBFOX1-205	6148	-	ENSANAP00000024118	421 (aa)	-	A0A2K5DT16
ENSANAT00000042106	RBFOX1-209	1140	-	ENSANAP00000024187	379 (aa)	-	A0A2K5DTG0
ENSANAT00000042060	RBFOX1-206	1128	-	ENSANAP00000024141	375 (aa)	-	A0A2K5DT45
ENSANAT00000042067	RBFOX1-207	4888	-	ENSANAP00000024148	400 (aa)	-	A0A2K5DT49
ENSANAT00000041995	RBFOX1-202	1401	-	ENSANAP00000024076	466 (aa)	-	A0A2K5DSX9
ENSANAT00000041987	RBFOX1-201	1740	XM_021673515	ENSANAP00000024068	579 (aa)	XP_021529190	A0A2K5DSX0
ENSANAT00000042097	RBFOX1-208	1080	-	ENSANAP00000024178	359 (aa)	-	A0A2K5DT78

Gene Model

Click here to download ENSANAG00000029527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000029527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000029527	RBFOX1	79	78.000	ENSANAG00000023457	RBFOX3	100	76.825
ENSANAG00000029527	RBFOX1	78	66.358	ENSANAG00000015245	RBFOX2	98	67.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000029527	RBFOX1	100	99.744	ENSG00000078328	RBFOX1	100	99.744	Homo_sapiens
ENSANAG00000029527	RBFOX1	97	81.842	ENSAPOG00000003197	rbfox1	98	81.890	Acanthochromis_polyacanthus
ENSANAG00000029527	RBFOX1	61	96.957	ENSAMEG00000008605	RBFOX1	100	95.600	Ailuropoda_melanoleuca
ENSANAG00000029527	RBFOX1	64	71.747	ENSACIG00000005478	rbfox1	68	71.747	Amphilophus_citrinellus
ENSANAG00000029527	RBFOX1	79	68.874	ENSAOCG00000008283	rbfox1	96	78.214	Amphiprion_ocellaris
ENSANAG00000029527	RBFOX1	95	75.069	ENSAPEG00000010636	rbfox1	100	75.207	Amphiprion_percula
ENSANAG00000029527	RBFOX1	70	76.761	ENSATEG00000007513	rbfox1	97	76.056	Anabas_testudineus
ENSANAG00000029527	RBFOX1	98	92.347	ENSAPLG00000013263	RBFOX1	98	92.347	Anas_platyrhynchos
ENSANAG00000029527	RBFOX1	99	85.390	ENSACAG00000004013	RBFOX1	99	85.390	Anolis_carolinensis
ENSANAG00000029527	RBFOX1	63	85.903	ENSAMXG00000002431	rbfox1	64	89.041	Astyanax_mexicanus
ENSANAG00000029527	RBFOX1	100	98.500	ENSBTAG00000007210	RBFOX1	100	98.500	Bos_taurus
ENSANAG00000029527	RBFOX1	100	99.744	ENSCJAG00000017351	RBFOX1	100	99.744	Callithrix_jacchus
ENSANAG00000029527	RBFOX1	98	98.718	ENSCAFG00000019082	RBFOX1	93	98.718	Canis_familiaris
ENSANAG00000029527	RBFOX1	98	88.636	ENSCAFG00020024881	RBFOX1	93	88.920	Canis_lupus_dingo
ENSANAG00000029527	RBFOX1	100	98.500	ENSCHIG00000023549	RBFOX1	100	98.500	Capra_hircus
ENSANAG00000029527	RBFOX1	99	97.878	ENSTSYG00000005334	RBFOX1	100	99.422	Carlito_syrichta
ENSANAG00000029527	RBFOX1	98	98.205	ENSCAPG00000017669	RBFOX1	100	96.144	Cavia_aperea
ENSANAG00000029527	RBFOX1	98	98.205	ENSCPOG00000011314	RBFOX1	100	95.420	Cavia_porcellus
ENSANAG00000029527	RBFOX1	100	100.000	ENSCCAG00000023031	RBFOX1	100	100.000	Cebus_capucinus
ENSANAG00000029527	RBFOX1	100	99.744	ENSCATG00000033816	RBFOX1	100	99.744	Cercocebus_atys
ENSANAG00000029527	RBFOX1	98	98.718	ENSCLAG00000012761	RBFOX1	100	96.000	Chinchilla_lanigera
ENSANAG00000029527	RBFOX1	99	93.600	ENSCSAG00000008739	RBFOX1	98	98.649	Chlorocebus_sabaeus
ENSANAG00000029527	RBFOX1	81	95.385	ENSCHOG00000012843	RBFOX1	94	75.510	Choloepus_hoffmanni
ENSANAG00000029527	RBFOX1	100	94.250	ENSCPBG00000026626	RBFOX1	100	94.250	Chrysemys_picta_bellii
ENSANAG00000029527	RBFOX1	100	99.744	ENSCANG00000033125	RBFOX1	100	99.744	Colobus_angolensis_palliatus
ENSANAG00000029527	RBFOX1	98	97.194	ENSCGRG00001013729	Rbfox1	99	94.670	Cricetulus_griseus_chok1gshd
ENSANAG00000029527	RBFOX1	98	97.194	ENSCGRG00000003272	Rbfox1	99	94.670	Cricetulus_griseus_crigri
ENSANAG00000029527	RBFOX1	93	76.757	ENSCSEG00000008840	rbfox1	100	76.757	Cynoglossus_semilaevis
ENSANAG00000029527	RBFOX1	97	88.430	ENSDARG00000014746	rbfox1	99	87.912	Danio_rerio
ENSANAG00000029527	RBFOX1	98	96.410	ENSDNOG00000043612	RBFOX1	94	96.410	Dasypus_novemcinctus
ENSANAG00000029527	RBFOX1	98	93.639	ENSDORG00000010024	Rbfox1	98	92.677	Dipodomys_ordii
ENSANAG00000029527	RBFOX1	100	75.682	ENSETEG00000003771	RBFOX1	96	75.682	Echinops_telfairi
ENSANAG00000029527	RBFOX1	100	99.250	ENSEASG00005011599	RBFOX1	100	99.250	Equus_asinus_asinus
ENSANAG00000029527	RBFOX1	98	98.724	ENSECAG00000012667	RBFOX1	98	98.378	Equus_caballus
ENSANAG00000029527	RBFOX1	100	53.581	ENSELUG00000013096	rbfox1	100	52.785	Esox_lucius
ENSANAG00000029527	RBFOX1	100	98.977	ENSFCAG00000025322	RBFOX1	100	98.977	Felis_catus
ENSANAG00000029527	RBFOX1	86	88.073	ENSFALG00000004027	RBFOX1	100	92.492	Ficedula_albicollis
ENSANAG00000029527	RBFOX1	98	98.718	ENSFDAG00000007388	RBFOX1	99	95.685	Fukomys_damarensis
ENSANAG00000029527	RBFOX1	98	94.103	ENSGALG00000034325	RBFOX1	97	94.278	Gallus_gallus
ENSANAG00000029527	RBFOX1	98	94.103	ENSGAGG00000023681	RBFOX1	100	92.857	Gopherus_agassizii
ENSANAG00000029527	RBFOX1	100	99.744	ENSGGOG00000016871	-	100	99.744	Gorilla_gorilla
ENSANAG00000029527	RBFOX1	98	98.462	ENSHGLG00000016944	RBFOX1	100	95.750	Heterocephalus_glaber_female
ENSANAG00000029527	RBFOX1	98	98.462	ENSHGLG00100003272	RBFOX1	100	95.750	Heterocephalus_glaber_male
ENSANAG00000029527	RBFOX1	83	77.188	ENSHCOG00000016419	rbfox1	91	77.188	Hippocampus_comes
ENSANAG00000029527	RBFOX1	93	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSANAG00000029527	RBFOX1	98	97.949	ENSSTOG00000000322	RBFOX1	99	96.277	Ictidomys_tridecemlineatus
ENSANAG00000029527	RBFOX1	98	94.615	ENSJJAG00000002575	Rbfox1	99	91.624	Jaculus_jaculus
ENSANAG00000029527	RBFOX1	98	76.640	ENSLBEG00000014659	rbfox1	97	79.076	Labrus_bergylta
ENSANAG00000029527	RBFOX1	98	85.496	ENSLOCG00000006675	rbfox1	99	86.041	Lepisosteus_oculatus
ENSANAG00000029527	RBFOX1	77	99.026	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSANAG00000029527	RBFOX1	100	99.488	ENSMFAG00000036447	RBFOX1	100	99.488	Macaca_fascicularis
ENSANAG00000029527	RBFOX1	100	99.488	ENSMMUG00000003458	RBFOX1	100	99.488	Macaca_mulatta
ENSANAG00000029527	RBFOX1	100	99.488	ENSMNEG00000032034	RBFOX1	100	99.488	Macaca_nemestrina
ENSANAG00000029527	RBFOX1	100	99.744	ENSMLEG00000015382	RBFOX1	100	99.775	Mandrillus_leucophaeus
ENSANAG00000029527	RBFOX1	93	81.096	ENSMAMG00000003142	rbfox1	100	81.644	Mastacembelus_armatus
ENSANAG00000029527	RBFOX1	81	87.241	ENSMGAG00000008606	RBFOX1	98	88.811	Meleagris_gallopavo
ENSANAG00000029527	RBFOX1	99	57.784	ENSMAUG00000020570	Rbfox1	99	57.256	Mesocricetus_auratus
ENSANAG00000029527	RBFOX1	100	99.233	ENSMICG00000034286	RBFOX1	100	99.233	Microcebus_murinus
ENSANAG00000029527	RBFOX1	98	97.194	ENSMOCG00000020932	Rbfox1	100	95.584	Microtus_ochrogaster
ENSANAG00000029527	RBFOX1	84	77.673	ENSMMOG00000009716	rbfox1	86	78.526	Mola_mola
ENSANAG00000029527	RBFOX1	94	92.655	ENSMODG00000005826	RBFOX1	100	97.458	Monodelphis_domestica
ENSANAG00000029527	RBFOX1	97	81.915	ENSMALG00000003337	rbfox1	98	81.600	Monopterus_albus
ENSANAG00000029527	RBFOX1	98	97.449	MGP_CAROLIEiJ_G0020427	Rbfox1	100	94.226	Mus_caroli
ENSANAG00000029527	RBFOX1	98	97.194	ENSMUSG00000008658	Rbfox1	100	98.496	Mus_musculus
ENSANAG00000029527	RBFOX1	98	97.449	MGP_PahariEiJ_G0016135	Rbfox1	99	94.924	Mus_pahari
ENSANAG00000029527	RBFOX1	98	96.939	MGP_SPRETEiJ_G0021321	Rbfox1	100	93.764	Mus_spretus
ENSANAG00000029527	RBFOX1	98	93.750	ENSMPUG00000014822	RBFOX1	93	98.365	Mustela_putorius_furo
ENSANAG00000029527	RBFOX1	77	96.753	ENSMLUG00000015896	RBFOX1	100	96.753	Myotis_lucifugus
ENSANAG00000029527	RBFOX1	98	97.704	ENSNGAG00000023276	Rbfox1	100	96.144	Nannospalax_galili
ENSANAG00000029527	RBFOX1	100	61.429	ENSNBRG00000011084	rbfox1	98	61.429	Neolamprologus_brichardi
ENSANAG00000029527	RBFOX1	100	99.200	ENSNLEG00000010017	-	100	99.200	Nomascus_leucogenys
ENSANAG00000029527	RBFOX1	82	96.721	ENSMEUG00000012525	RBFOX1	93	79.949	Notamacropus_eugenii
ENSANAG00000029527	RBFOX1	88	96.957	ENSOPRG00000006199	-	79	96.957	Ochotona_princeps
ENSANAG00000029527	RBFOX1	98	97.949	ENSODEG00000013166	RBFOX1	99	94.924	Octodon_degus
ENSANAG00000029527	RBFOX1	99	90.133	ENSOANG00000002379	RBFOX1	98	95.405	Ornithorhynchus_anatinus
ENSANAG00000029527	RBFOX1	62	95.928	ENSOCUG00000001205	-	100	94.667	Oryctolagus_cuniculus
ENSANAG00000029527	RBFOX1	99	96.447	ENSOGAG00000025535	RBFOX1	99	96.447	Otolemur_garnettii
ENSANAG00000029527	RBFOX1	68	86.531	ENSOARG00000005135	RBFOX1	99	93.074	Ovis_aries
ENSANAG00000029527	RBFOX1	100	99.744	ENSPPAG00000036238	-	100	99.744	Pan_paniscus
ENSANAG00000029527	RBFOX1	100	98.977	ENSPPRG00000006546	RBFOX1	100	98.977	Panthera_pardus
ENSANAG00000029527	RBFOX1	98	87.097	ENSPTIG00000021154	RBFOX1	99	87.097	Panthera_tigris_altaica
ENSANAG00000029527	RBFOX1	100	99.744	ENSPTRG00000007744	RBFOX1	100	99.744	Pan_troglodytes
ENSANAG00000029527	RBFOX1	100	99.744	ENSPANG00000026500	RBFOX1	100	99.744	Papio_anubis
ENSANAG00000029527	RBFOX1	71	92.481	ENSPKIG00000019353	rbfox1	86	92.075	Paramormyrops_kingsleyae
ENSANAG00000029527	RBFOX1	97	88.767	ENSPKIG00000009667	-	95	90.323	Paramormyrops_kingsleyae
ENSANAG00000029527	RBFOX1	100	92.750	ENSPSIG00000006523	RBFOX1	100	92.750	Pelodiscus_sinensis
ENSANAG00000029527	RBFOX1	98	97.449	ENSPEMG00000017607	Rbfox1	99	94.924	Peromyscus_maniculatus_bairdii
ENSANAG00000029527	RBFOX1	72	93.662	ENSPCIG00000026887	RBFOX1	100	93.662	Phascolarctos_cinereus
ENSANAG00000029527	RBFOX1	98	94.565	ENSPPYG00000007079	-	93	99.183	Pongo_abelii
ENSANAG00000029527	RBFOX1	90	89.153	ENSPCAG00000002630	RBFOX1	100	89.153	Procavia_capensis
ENSANAG00000029527	RBFOX1	100	99.233	ENSPCOG00000025687	RBFOX1	100	99.233	Propithecus_coquereli
ENSANAG00000029527	RBFOX1	98	94.359	ENSPVAG00000013467	RBFOX1	93	94.359	Pteropus_vampyrus
ENSANAG00000029527	RBFOX1	93	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSANAG00000029527	RBFOX1	98	95.153	ENSRNOG00000002827	Rbfox1	100	91.948	Rattus_norvegicus
ENSANAG00000029527	RBFOX1	96	99.446	ENSRBIG00000044478	RBFOX1	100	99.758	Rhinopithecus_bieti
ENSANAG00000029527	RBFOX1	100	99.744	ENSRROG00000044411	RBFOX1	100	99.744	Rhinopithecus_roxellana
ENSANAG00000029527	RBFOX1	100	99.785	ENSSBOG00000033726	RBFOX1	100	99.804	Saimiri_boliviensis_boliviensis
ENSANAG00000029527	RBFOX1	97	91.260	ENSSHAG00000009257	RBFOX1	98	91.260	Sarcophilus_harrisii
ENSANAG00000029527	RBFOX1	97	77.072	ENSSFOG00015023675	rbfox1	100	86.667	Scleropages_formosus
ENSANAG00000029527	RBFOX1	89	74.052	ENSSFOG00015009955	-	87	74.052	Scleropages_formosus
ENSANAG00000029527	RBFOX1	97	82.940	ENSSMAG00000015505	rbfox1	93	82.677	Scophthalmus_maximus
ENSANAG00000029527	RBFOX1	97	80.163	ENSSDUG00000016413	rbfox1	99	80.274	Seriola_dumerili
ENSANAG00000029527	RBFOX1	83	79.233	ENSSLDG00000009353	rbfox1	95	78.477	Seriola_lalandi_dorsalis
ENSANAG00000029527	RBFOX1	83	89.776	ENSSPUG00000009732	RBFOX1	100	77.778	Sphenodon_punctatus
ENSANAG00000029527	RBFOX1	100	78.571	ENSSPAG00000009723	rbfox1	100	81.530	Stegastes_partitus
ENSANAG00000029527	RBFOX1	94	98.408	ENSSSCG00000007917	RBFOX1	100	99.153	Sus_scrofa
ENSANAG00000029527	RBFOX1	98	92.821	ENSTGUG00000004562	RBFOX1	100	92.821	Taeniopygia_guttata
ENSANAG00000029527	RBFOX1	97	81.266	ENSTRUG00000020940	rbfox1	99	81.530	Takifugu_rubripes
ENSANAG00000029527	RBFOX1	64	63.066	ENSTNIG00000002567	rbfox1	100	64.808	Tetraodon_nigroviridis
ENSANAG00000029527	RBFOX1	66	100.000	ENSTBEG00000009169	-	60	100.000	Tupaia_belangeri
ENSANAG00000029527	RBFOX1	98	98.462	ENSTTRG00000005700	RBFOX1	93	98.462	Tursiops_truncatus
ENSANAG00000029527	RBFOX1	98	98.580	ENSUAMG00000024633	RBFOX1	100	96.042	Ursus_americanus
ENSANAG00000029527	RBFOX1	100	86.807	ENSUMAG00000003579	RBFOX1	100	87.071	Ursus_maritimus
ENSANAG00000029527	RBFOX1	77	99.026	ENSVPAG00000001284	RBFOX1	74	99.026	Vicugna_pacos
ENSANAG00000029527	RBFOX1	97	98.077	ENSVVUG00000017311	RBFOX1	98	98.108	Vulpes_vulpes